RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 EEF2P13639 858 aaKnown RBP21.67■■□□□ 1.06
CGREF1-208ENST00000467539 KIAA1755Q5JYT7 1200 aa21.67■■□□□ 1.06
CGREF1-208ENST00000467539 PAGR1Q9BTK6 254 aa21.67■■□□□ 1.06
CGREF1-208ENST00000467539 VCPKMTQ9H867 229 aa21.67■■□□□ 1.06
CGREF1-208ENST00000467539 ROBO3Q96MS0 1386 aa21.66■■□□□ 1.06
CGREF1-208ENST00000467539 CCL5P13501 91 aa21.66■■□□□ 1.06
CGREF1-208ENST00000467539 CLEC10AQ8IUN9 316 aa21.66■■□□□ 1.06
CGREF1-208ENST00000467539 ZNF444Q8N0Y2 327 aaPredicted RBP21.66■■□□□ 1.06
CGREF1-208ENST00000467539 DOCK3Q8IZD9 2030 aa21.66■■□□□ 1.06
CGREF1-208ENST00000467539 GJB1P08034 283 aa21.65■■□□□ 1.06
CGREF1-208ENST00000467539 ELNP15502 786 aa21.65■■□□□ 1.06
CGREF1-208ENST00000467539 CCNA1P78396 465 aa21.65■■□□□ 1.06
CGREF1-208ENST00000467539 CCAR1Q8IX12 1150 aaKnown RBP21.65■■□□□ 1.06
CGREF1-208ENST00000467539 STK11IPQ8N1F8 1099 aa21.65■■□□□ 1.06
CGREF1-208ENST00000467539 NAPBQ9H115 298 aa21.65■■□□□ 1.06
CGREF1-208ENST00000467539 PORCNQ9H237 461 aa21.65■■□□□ 1.06
CGREF1-208ENST00000467539 SPDYE16A6NNV3 312 aaPredicted RBP21.64■■□□□ 1.05
CGREF1-208ENST00000467539 TRIM6-TRIM34B2RNG4 842 aa21.64■■□□□ 1.05
CGREF1-208ENST00000467539 XRCC5P13010 732 aaKnown RBP21.64■■□□□ 1.05
CGREF1-208ENST00000467539 ATP2B2Q01814 1243 aa21.64■■□□□ 1.05
CGREF1-208ENST00000467539 MCMDC2Q4G0Z9 681 aa21.64■■□□□ 1.05
CGREF1-208ENST00000467539 CCDC129Q6ZRS4 1044 aa21.64■■□□□ 1.05
CGREF1-208ENST00000467539 PLEKHH3Q7Z736 793 aa21.64■■□□□ 1.05
CGREF1-208ENST00000467539 NKX2-3Q8TAU0 364 aa21.64■■□□□ 1.05
CGREF1-208ENST00000467539 NUDT12Q9BQG2 462 aa21.64■■□□□ 1.05
CGREF1-208ENST00000467539 RNF208Q9H0X6 261 aa21.64■■□□□ 1.05
CGREF1-208ENST00000467539 BTBD7Q9P203 1132 aa21.64■■□□□ 1.05
CGREF1-208ENST00000467539 NYAP2Q9P242 653 aa21.64■■□□□ 1.05
CGREF1-208ENST00000467539 FOXP2O15409 715 aa21.63■■□□□ 1.05
CGREF1-208ENST00000467539 SLC3A2P08195 630 aaKnown RBP21.63■■□□□ 1.05
CGREF1-208ENST00000467539 DSG3P32926 999 aa21.63■■□□□ 1.05
CGREF1-208ENST00000467539 PDE4BQ07343 736 aa21.63■■□□□ 1.05
CGREF1-208ENST00000467539 ALX1Q15699 326 aa21.63■■□□□ 1.05
CGREF1-208ENST00000467539 GPR142Q7Z601 462 aa21.63■■□□□ 1.05
CGREF1-208ENST00000467539 SPICE1Q8N0Z3 855 aa21.63■■□□□ 1.05
CGREF1-208ENST00000467539 USP6NLQ92738 828 aa21.63■■□□□ 1.05
CGREF1-208ENST00000467539 TANGO6Q9C0B7 1094 aa21.63■■□□□ 1.05
CGREF1-208ENST00000467539 IGKV6D-41A0A0C4DH26 115 aa21.62■■□□□ 1.05
CGREF1-208ENST00000467539 WDR46O15213 610 aaKnown RBP21.62■■□□□ 1.05
CGREF1-208ENST00000467539 INHAP05111 366 aa21.62■■□□□ 1.05
CGREF1-208ENST00000467539 CAPN2P17655 700 aa21.62■■□□□ 1.05
CGREF1-208ENST00000467539 GJA8P48165 433 aa21.62■■□□□ 1.05
CGREF1-208ENST00000467539 PPARAQ07869 468 aa21.62■■□□□ 1.05
CGREF1-208ENST00000467539 MORN1Q5T089 497 aa21.62■■□□□ 1.05
CGREF1-208ENST00000467539 MKL1Q969V6 931 aa21.62■■□□□ 1.05
CGREF1-208ENST00000467539 RILPL2Q969X0 211 aa21.62■■□□□ 1.05
CGREF1-208ENST00000467539 FAM227BQ96M60 508 aa21.62■■□□□ 1.05
CGREF1-208ENST00000467539 UNC93B1Q9H1C4 597 aa21.62■■□□□ 1.05
CGREF1-208ENST00000467539 GOPCQ9HD26 462 aa21.62■■□□□ 1.05
CGREF1-208ENST00000467539 PRDM1O75626 825 aa21.61■■□□□ 1.05
CGREF1-208ENST00000467539 MB21D1Q8N884 522 aa21.61■■□□□ 1.05
CGREF1-208ENST00000467539 SOCS4Q8WXH5 440 aa21.61■■□□□ 1.05
CGREF1-208ENST00000467539 FLOT1O75955 427 aa21.6■■□□□ 1.05
CGREF1-208ENST00000467539 SDSP20132 328 aa21.6■■□□□ 1.05
CGREF1-208ENST00000467539 CYP2B6P20813 491 aa21.6■■□□□ 1.05
CGREF1-208ENST00000467539 IRX6P78412 446 aaPredicted RBP21.6■■□□□ 1.05
CGREF1-208ENST00000467539 VPS53Q5VIR6 699 aa21.6■■□□□ 1.05
CGREF1-208ENST00000467539 TRMT44Q8IYL2 757 aaKnown RBP21.6■■□□□ 1.05
CGREF1-208ENST00000467539 NEDD1Q8NHV4 660 aa21.6■■□□□ 1.05
CGREF1-208ENST00000467539 CLIP2Q9UDT6 1046 aa21.6■■□□□ 1.05
CGREF1-208ENST00000467539 ANAPC4Q9UJX5 808 aa21.6■■□□□ 1.05
CGREF1-208ENST00000467539 ADAMTS5Q9UNA0 930 aa21.6■■□□□ 1.05
CGREF1-208ENST00000467539 RBBP6Q7Z6E9 1792 aaKnown RBP21.6■■□□□ 1.05
CGREF1-208ENST00000467539 MYH8P13535 1937 aa21.59■■□□□ 1.05
CGREF1-208ENST00000467539 A0A0D9SFI3 127 aa21.59■■□□□ 1.05
CGREF1-208ENST00000467539 F5H6K3 240 aa21.59■■□□□ 1.05
CGREF1-208ENST00000467539 SGPL1O95470 568 aa21.59■■□□□ 1.05
CGREF1-208ENST00000467539 HMGCRP04035 888 aa21.59■■□□□ 1.05
CGREF1-208ENST00000467539 PTPREP23469 700 aa21.59■■□□□ 1.05
CGREF1-208ENST00000467539 KLRC3Q07444 240 aa21.59■■□□□ 1.05
CGREF1-208ENST00000467539 NMIQ13287 307 aaPredicted RBP21.59■■□□□ 1.05
CGREF1-208ENST00000467539 MTMR4Q9NYA4 1195 aa21.59■■□□□ 1.05
CGREF1-208ENST00000467539 BRCA2P51587 3418 aa21.59■■□□□ 1.05
CGREF1-208ENST00000467539 SLC15A5A6NIM6 579 aa21.58■■□□□ 1.05
CGREF1-208ENST00000467539 FGAP02671 866 aa21.58■■□□□ 1.05
CGREF1-208ENST00000467539 RGS2P41220 211 aa21.58■■□□□ 1.05
CGREF1-208ENST00000467539 TFAP4Q01664 338 aa21.58■■□□□ 1.05
CGREF1-208ENST00000467539 U2AF1L4Q8WU68 220 aaKnown RBP21.58■■□□□ 1.05
CGREF1-208ENST00000467539 MOV10L1Q9BXT6 1211 aaKnown RBP21.58■■□□□ 1.05
CGREF1-208ENST00000467539 SPATC1LQ9H0A9 340 aa21.58■■□□□ 1.05
CGREF1-208ENST00000467539 CWC22Q9HCG8 908 aaKnown RBP21.58■■□□□ 1.05
CGREF1-208ENST00000467539 SYNPO2Q9UMS6 1093 aa21.58■■□□□ 1.05
CGREF1-208ENST00000467539 PDE4DIPQ5VU43 2346 aa21.57■■□□□ 1.04
CGREF1-208ENST00000467539 STRNO43815 780 aa21.57■■□□□ 1.04
CGREF1-208ENST00000467539 FGRP09769 529 aa21.57■■□□□ 1.04
CGREF1-208ENST00000467539 TSPY3P0CV98 308 aa21.57■■□□□ 1.04
CGREF1-208ENST00000467539 TSPY8P0CW00 308 aa21.57■■□□□ 1.04
CGREF1-208ENST00000467539 HSPD1P10809 573 aaKnown RBP21.57■■□□□ 1.04
CGREF1-208ENST00000467539 MAP2K5Q13163 448 aa21.57■■□□□ 1.04
CGREF1-208ENST00000467539 SHCBP1Q8NEM2 672 aa21.57■■□□□ 1.04
CGREF1-208ENST00000467539 SHISA4Q96DD7 197 aa21.57■■□□□ 1.04
CGREF1-208ENST00000467539 ATG4CQ96DT6 458 aa21.57■■□□□ 1.04
CGREF1-208ENST00000467539 CEP95Q96GE4 821 aa21.57■■□□□ 1.04
CGREF1-208ENST00000467539 PAK6Q9NQU5 681 aaPredicted RBP21.57■■□□□ 1.04
CGREF1-208ENST00000467539 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.57■■□□□ 1.04
CGREF1-208ENST00000467539 RPTORQ8N122 1335 aa21.56■■□□□ 1.04
CGREF1-208ENST00000467539 TTLL1O95922 423 aa21.56■■□□□ 1.04
CGREF1-208ENST00000467539 CTDSPL2Q05D32 466 aa21.56■■□□□ 1.04
CGREF1-208ENST00000467539 FAM47AQ5JRC9 791 aa21.56■■□□□ 1.04
CGREF1-208ENST00000467539 FAM83BQ5T0W9 1011 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms