RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 THAP5Q7Z6K1 395 aa6.24□□□□□ -1.41
VPS50-209ENST00000467326 Q96M66 194 aa6.24□□□□□ -1.41
VPS50-209ENST00000467326 KREMEN1Q96MU8 473 aa6.24□□□□□ -1.41
VPS50-209ENST00000467326 ATP13A1Q9HD20 1204 aa6.24□□□□□ -1.41
VPS50-209ENST00000467326 SEMA3GQ9NS98 782 aa6.24□□□□□ -1.41
VPS50-209ENST00000467326 ZNRF3Q9ULT6 936 aa6.24□□□□□ -1.41
VPS50-209ENST00000467326 RGS13O14921 159 aa6.23□□□□□ -1.41
VPS50-209ENST00000467326 POLR2BP30876 1174 aaKnown RBP6.23□□□□□ -1.41
VPS50-209ENST00000467326 GBP1P32455 592 aa6.23□□□□□ -1.41
VPS50-209ENST00000467326 PAK2Q13177 524 aa6.23□□□□□ -1.41
VPS50-209ENST00000467326 LRRFIP1Q32MZ4 808 aaKnown RBP6.23□□□□□ -1.41
VPS50-209ENST00000467326 ZNF792Q3KQV3 632 aa6.23□□□□□ -1.41
VPS50-209ENST00000467326 DTWD2Q8NBA8 298 aa6.23□□□□□ -1.41
VPS50-209ENST00000467326 ZNF428Q96B54 188 aa6.23□□□□□ -1.41
VPS50-209ENST00000467326 FERD3LQ96RJ6 166 aa6.23□□□□□ -1.41
VPS50-209ENST00000467326 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.23□□□□□ -1.41
VPS50-209ENST00000467326 RBAK-RBAKDNI3L0D1 243 aa6.22□□□□□ -1.41
VPS50-209ENST00000467326 UBOX5O94941 541 aa6.22□□□□□ -1.41
VPS50-209ENST00000467326 IMPDH2P12268 514 aa6.22□□□□□ -1.41
VPS50-209ENST00000467326 RNF4P78317 190 aa6.22□□□□□ -1.41
VPS50-209ENST00000467326 ZP2Q05996 745 aa6.22□□□□□ -1.41
VPS50-209ENST00000467326 CDCP2Q5VXM1 449 aa6.22□□□□□ -1.41
VPS50-209ENST00000467326 GPRASP2Q96D09 838 aa6.22□□□□□ -1.41
VPS50-209ENST00000467326 ATG4CQ96DT6 458 aa6.22□□□□□ -1.41
VPS50-209ENST00000467326 ANTXR1Q9H6X2 564 aa6.22□□□□□ -1.41
VPS50-209ENST00000467326 CCSER2Q9H7U1 834 aa6.22□□□□□ -1.41
VPS50-209ENST00000467326 CNNM2Q9H8M5 875 aa6.22□□□□□ -1.41
VPS50-209ENST00000467326 ADAMTS6Q9UKP5 1117 aa6.22□□□□□ -1.41
VPS50-209ENST00000467326 KCNH3Q9ULD8 1083 aa6.22□□□□□ -1.41
VPS50-209ENST00000467326 RBM25P49756 843 aaKnown RBP6.21□□□□□ -1.42
VPS50-209ENST00000467326 KRTAP19-4Q3LI73 84 aa6.21□□□□□ -1.42
VPS50-209ENST00000467326 SLC23A3Q6PIS1 610 aa6.21□□□□□ -1.42
VPS50-209ENST00000467326 PI4K2BQ8TCG2 481 aa6.21□□□□□ -1.42
VPS50-209ENST00000467326 SPATA32Q96LK8 384 aa6.21□□□□□ -1.42
VPS50-209ENST00000467326 TGIF2Q9GZN2 237 aa6.21□□□□□ -1.42
VPS50-209ENST00000467326 TRIT1Q9H3H1 467 aaKnown RBP6.21□□□□□ -1.42
VPS50-209ENST00000467326 CARS2Q9HA77 564 aaKnown RBP6.21□□□□□ -1.42
VPS50-209ENST00000467326 RC3H2Q9HBD1 1191 aaKnown RBP6.21□□□□□ -1.42
VPS50-209ENST00000467326 MBNL3Q9NUK0 354 aaKnown RBP6.21□□□□□ -1.42
VPS50-209ENST00000467326 ZSWIM5Q9P217 1185 aa6.21□□□□□ -1.42
VPS50-209ENST00000467326 PPT2Q9UMR5 302 aa6.21□□□□□ -1.42
VPS50-209ENST00000467326 TNFRSF10CO14798 259 aa6.2□□□□□ -1.42
VPS50-209ENST00000467326 FARP2O94887 1054 aaPredicted RBP6.2□□□□□ -1.42
VPS50-209ENST00000467326 RNASE1P07998 156 aaKnown RBP6.2□□□□□ -1.42
VPS50-209ENST00000467326 NME1P15531 152 aaKnown RBP6.2□□□□□ -1.42
VPS50-209ENST00000467326 TCF3P15923 654 aa6.2□□□□□ -1.42
VPS50-209ENST00000467326 CCNFP41002 786 aa6.2□□□□□ -1.42
VPS50-209ENST00000467326 RAD51AP2Q09MP3 1159 aa6.2□□□□□ -1.42
VPS50-209ENST00000467326 FBXW10Q5XX13 1052 aa6.2□□□□□ -1.42
VPS50-209ENST00000467326 UBE2FQ969M7 185 aa6.2□□□□□ -1.42
VPS50-209ENST00000467326 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.2□□□□□ -1.42
VPS50-209ENST00000467326 PRDM7Q9NQW5 492 aa6.2□□□□□ -1.42
VPS50-209ENST00000467326 GPATCH2Q9NW75 528 aa6.2□□□□□ -1.42
VPS50-209ENST00000467326 LRRN2O75325 713 aa6.19□□□□□ -1.42
VPS50-209ENST00000467326 CLEC3AO75596 197 aa6.19□□□□□ -1.42
VPS50-209ENST00000467326 GJA8P48165 433 aa6.19□□□□□ -1.42
VPS50-209ENST00000467326 COL9A2Q14055 689 aaPredicted RBP6.19□□□□□ -1.42
VPS50-209ENST00000467326 CCDC81Q6ZN84 652 aa6.19□□□□□ -1.42
VPS50-209ENST00000467326 TMPRSS7Q7RTY8 843 aa6.19□□□□□ -1.42
VPS50-209ENST00000467326 LRRN4CLQ8ND94 238 aa6.19□□□□□ -1.42
VPS50-209ENST00000467326 RASGRP4Q8TDF6 673 aa6.19□□□□□ -1.42
VPS50-209ENST00000467326 SLC38A3Q99624 504 aa6.19□□□□□ -1.42
VPS50-209ENST00000467326 GPR62Q9BZJ7 368 aa6.19□□□□□ -1.42
VPS50-209ENST00000467326 GINM1Q9NU53 330 aa6.19□□□□□ -1.42
VPS50-209ENST00000467326 LMCD1Q9NZU5 365 aa6.19□□□□□ -1.42
VPS50-209ENST00000467326 SOX9P48436 509 aa6.18□□□□□ -1.42
VPS50-209ENST00000467326 GAB4Q2WGN9 574 aa6.18□□□□□ -1.42
VPS50-209ENST00000467326 SLC6A18Q96N87 628 aa6.18□□□□□ -1.42
VPS50-209ENST00000467326 DUSP15Q9H1R2 295 aaPredicted RBP6.18□□□□□ -1.42
VPS50-209ENST00000467326 ACBD3Q9H3P7 528 aa6.18□□□□□ -1.42
VPS50-209ENST00000467326 EFR3BQ9Y2G0 817 aa6.18□□□□□ -1.42
VPS50-209ENST00000467326 SHISA3A0PJX4 238 aa6.17□□□□□ -1.42
VPS50-209ENST00000467326 FAM86C2PA6NEL3 165 aa6.17□□□□□ -1.42
VPS50-209ENST00000467326 SRFP11831 508 aa6.17□□□□□ -1.42
VPS50-209ENST00000467326 ERCC5P28715 1186 aaPredicted RBP6.17□□□□□ -1.42
VPS50-209ENST00000467326 TPP2P29144 1249 aaPredicted RBP6.17□□□□□ -1.42
VPS50-209ENST00000467326 LSRQ86X29 649 aaPredicted RBP6.17□□□□□ -1.42
VPS50-209ENST00000467326 KSR1Q8IVT5 923 aa6.17□□□□□ -1.42
VPS50-209ENST00000467326 TAB3Q8N5C8 712 aaPredicted RBP6.17□□□□□ -1.42
VPS50-209ENST00000467326 VWCEQ96DN2 955 aa6.17□□□□□ -1.42
VPS50-209ENST00000467326 ZNF512BQ96KM6 892 aaPredicted RBP6.17□□□□□ -1.42
VPS50-209ENST00000467326 SLC9A7Q96T83 725 aa6.17□□□□□ -1.42
VPS50-209ENST00000467326 TM9SF2Q99805 663 aa6.17□□□□□ -1.42
VPS50-209ENST00000467326 DUSP13Q9UII6 198 aa6.17□□□□□ -1.42
VPS50-209ENST00000467326 INPP5FQ9Y2H2 1132 aa6.17□□□□□ -1.42
VPS50-209ENST00000467326 WASH4PA8MWX3 477 aa6.16□□□□□ -1.42
VPS50-209ENST00000467326 PAPLNO95428 1278 aa6.16□□□□□ -1.42
VPS50-209ENST00000467326 ESR1P03372 595 aa6.16□□□□□ -1.42
VPS50-209ENST00000467326 ACRP10323 421 aa6.16□□□□□ -1.42
VPS50-209ENST00000467326 LTKP29376 864 aa6.16□□□□□ -1.42
VPS50-209ENST00000467326 NMIQ13287 307 aaPredicted RBP6.16□□□□□ -1.42
VPS50-209ENST00000467326 CLEC16AQ2KHT3 1053 aa6.16□□□□□ -1.42
VPS50-209ENST00000467326 NBPF12Q5TAG4 269 aaPredicted RBP6.16□□□□□ -1.42
VPS50-209ENST00000467326 TSPYL5Q86VY4 417 aaPredicted RBP6.16□□□□□ -1.42
VPS50-209ENST00000467326 CREG2Q8IUH2 290 aa6.16□□□□□ -1.42
VPS50-209ENST00000467326 TMEM192Q8IY95 271 aa6.16□□□□□ -1.42
VPS50-209ENST00000467326 RBBP8NLQ8NC74 664 aaPredicted RBP6.16□□□□□ -1.42
VPS50-209ENST00000467326 FLAD1Q8NFF5 587 aa6.16□□□□□ -1.42
VPS50-209ENST00000467326 MKRN2Q9H000 416 aaKnown RBP6.16□□□□□ -1.42
VPS50-209ENST00000467326 ASCC2Q9H1I8 757 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms