RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 LRRN4CLQ8ND94 238 aa6.55□□□□□ -1.36
VPS13D-203ENST00000466732 FERD3LQ96RJ6 166 aa6.55□□□□□ -1.36
VPS13D-203ENST00000466732 GPR62Q9BZJ7 368 aa6.55□□□□□ -1.36
VPS13D-203ENST00000466732 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.55□□□□□ -1.36
VPS13D-203ENST00000466732 TRIT1Q9H3H1 467 aaKnown RBP6.55□□□□□ -1.36
VPS13D-203ENST00000466732 TNFRSF10CO14798 259 aa6.54□□□□□ -1.36
VPS13D-203ENST00000466732 IMPDH2P12268 514 aa6.54□□□□□ -1.36
VPS13D-203ENST00000466732 TPP2P29144 1249 aaPredicted RBP6.54□□□□□ -1.36
VPS13D-203ENST00000466732 CCNFP41002 786 aa6.54□□□□□ -1.36
VPS13D-203ENST00000466732 RAD51AP2Q09MP3 1159 aa6.54□□□□□ -1.36
VPS13D-203ENST00000466732 GPRASP2Q96D09 838 aa6.54□□□□□ -1.36
VPS13D-203ENST00000466732 TGIF2Q9GZN2 237 aa6.54□□□□□ -1.36
VPS13D-203ENST00000466732 GINM1Q9NU53 330 aa6.54□□□□□ -1.36
VPS13D-203ENST00000466732 GPATCH2Q9NW75 528 aa6.54□□□□□ -1.36
VPS13D-203ENST00000466732 PPT2Q9UMR5 302 aa6.54□□□□□ -1.36
VPS13D-203ENST00000466732 ESR1P03372 595 aa6.53□□□□□ -1.36
VPS13D-203ENST00000466732 ITGB5P18084 799 aa6.53□□□□□ -1.36
VPS13D-203ENST00000466732 RNF4P78317 190 aa6.53□□□□□ -1.36
VPS13D-203ENST00000466732 COL9A2Q14055 689 aaPredicted RBP6.53□□□□□ -1.36
VPS13D-203ENST00000466732 NBPF12Q5TAG4 269 aaPredicted RBP6.53□□□□□ -1.36
VPS13D-203ENST00000466732 TMPRSS7Q7RTY8 843 aa6.53□□□□□ -1.36
VPS13D-203ENST00000466732 RASGRP4Q8TDF6 673 aa6.53□□□□□ -1.36
VPS13D-203ENST00000466732 SPATA32Q96LK8 384 aa6.53□□□□□ -1.36
VPS13D-203ENST00000466732 SLC9A7Q96T83 725 aa6.53□□□□□ -1.36
VPS13D-203ENST00000466732 GJA8P48165 433 aa6.52□□□□□ -1.37
VPS13D-203ENST00000466732 RBM25P49756 843 aaKnown RBP6.52□□□□□ -1.37
VPS13D-203ENST00000466732 GAB4Q2WGN9 574 aa6.52□□□□□ -1.37
VPS13D-203ENST00000466732 FBXW10Q5XX13 1052 aa6.52□□□□□ -1.37
VPS13D-203ENST00000466732 TSPYL5Q86VY4 417 aaPredicted RBP6.52□□□□□ -1.37
VPS13D-203ENST00000466732 CREG2Q8IUH2 290 aa6.52□□□□□ -1.37
VPS13D-203ENST00000466732 TMEM192Q8IY95 271 aa6.52□□□□□ -1.37
VPS13D-203ENST00000466732 RBBP8NLQ8NC74 664 aaPredicted RBP6.52□□□□□ -1.37
VPS13D-203ENST00000466732 ACBD3Q9H3P7 528 aa6.52□□□□□ -1.37
VPS13D-203ENST00000466732 EFR3BQ9Y2G0 817 aa6.52□□□□□ -1.37
VPS13D-203ENST00000466732 SHISA3A0PJX4 238 aa6.51□□□□□ -1.37
VPS13D-203ENST00000466732 CLEC3AO75596 197 aa6.51□□□□□ -1.37
VPS13D-203ENST00000466732 PAPLNO95428 1278 aa6.51□□□□□ -1.37
VPS13D-203ENST00000466732 ACRP10323 421 aa6.51□□□□□ -1.37
VPS13D-203ENST00000466732 JUNBP17275 347 aaPredicted RBP6.51□□□□□ -1.37
VPS13D-203ENST00000466732 SOX9P48436 509 aa6.51□□□□□ -1.37
VPS13D-203ENST00000466732 INTS3Q68E01 1043 aaKnown RBP6.51□□□□□ -1.37
VPS13D-203ENST00000466732 CCDC81Q6ZN84 652 aa6.51□□□□□ -1.37
VPS13D-203ENST00000466732 ATG4DQ86TL0 474 aaPredicted RBP6.51□□□□□ -1.37
VPS13D-203ENST00000466732 ZNF512BQ96KM6 892 aaPredicted RBP6.51□□□□□ -1.37
VPS13D-203ENST00000466732 SLC6A18Q96N87 628 aa6.51□□□□□ -1.37
VPS13D-203ENST00000466732 DUSP13Q9UII6 198 aa6.51□□□□□ -1.37
VPS13D-203ENST00000466732 FAM86C2PA6NEL3 165 aa6.5□□□□□ -1.37
VPS13D-203ENST00000466732 BIN1O00499 593 aa6.5□□□□□ -1.37
VPS13D-203ENST00000466732 NBPF9Q3BBW0 867 aa6.5□□□□□ -1.37
VPS13D-203ENST00000466732 LSRQ86X29 649 aaPredicted RBP6.5□□□□□ -1.37
VPS13D-203ENST00000466732 TAB3Q8N5C8 712 aaPredicted RBP6.5□□□□□ -1.37
VPS13D-203ENST00000466732 TM9SF2Q99805 663 aa6.5□□□□□ -1.37
VPS13D-203ENST00000466732 CCSER2Q9H7U1 834 aa6.5□□□□□ -1.37
VPS13D-203ENST00000466732 CTNND2Q9UQB3 1225 aa6.5□□□□□ -1.37
VPS13D-203ENST00000466732 PAX4O43316 350 aa6.49□□□□□ -1.37
VPS13D-203ENST00000466732 TCF3P15923 654 aa6.49□□□□□ -1.37
VPS13D-203ENST00000466732 ERCC5P28715 1186 aaPredicted RBP6.49□□□□□ -1.37
VPS13D-203ENST00000466732 NMIQ13287 307 aaPredicted RBP6.49□□□□□ -1.37
VPS13D-203ENST00000466732 SNW1Q13573 536 aaKnown RBP6.49□□□□□ -1.37
VPS13D-203ENST00000466732 CLEC16AQ2KHT3 1053 aa6.49□□□□□ -1.37
VPS13D-203ENST00000466732 RUFY4Q6ZNE9 571 aa6.49□□□□□ -1.37
VPS13D-203ENST00000466732 FLAD1Q8NFF5 587 aa6.49□□□□□ -1.37
VPS13D-203ENST00000466732 ALPK1Q96QP1 1244 aa6.49□□□□□ -1.37
VPS13D-203ENST00000466732 ASCC2Q9H1I8 757 aaPredicted RBP6.49□□□□□ -1.37
VPS13D-203ENST00000466732 C19orf73Q9NVV2 129 aa6.49□□□□□ -1.37
VPS13D-203ENST00000466732 SLAMF8Q9P0V8 285 aa6.49□□□□□ -1.37
VPS13D-203ENST00000466732 INPP5FQ9Y2H2 1132 aa6.49□□□□□ -1.37
VPS13D-203ENST00000466732 DNAJC25-GNG10A0A024R161 153 aa6.48□□□□□ -1.37
VPS13D-203ENST00000466732 GUCY2CP25092 1073 aa6.48□□□□□ -1.37
VPS13D-203ENST00000466732 LTKP29376 864 aa6.48□□□□□ -1.37
VPS13D-203ENST00000466732 NASPP49321 788 aaPredicted RBP6.48□□□□□ -1.37
VPS13D-203ENST00000466732 EGR3Q06889 387 aa6.48□□□□□ -1.37
VPS13D-203ENST00000466732 TMC3Q7Z5M5 1100 aa6.48□□□□□ -1.37
VPS13D-203ENST00000466732 ENOX1Q8TC92 643 aaKnown RBP6.48□□□□□ -1.37
VPS13D-203ENST00000466732 ASIC4Q96FT7 647 aa6.48□□□□□ -1.37
VPS13D-203ENST00000466732 CRBNQ96SW2 442 aa6.48□□□□□ -1.37
VPS13D-203ENST00000466732 HDAC8Q9BY41 377 aa6.48□□□□□ -1.37
VPS13D-203ENST00000466732 KRTAP4-8Q9BYQ9 185 aa6.48□□□□□ -1.37
VPS13D-203ENST00000466732 MKRN2Q9H000 416 aaKnown RBP6.48□□□□□ -1.37
VPS13D-203ENST00000466732 SUCOQ9UBS9 1254 aaKnown RBP6.48□□□□□ -1.37
VPS13D-203ENST00000466732 PCDHA11Q9Y5I1 949 aa6.48□□□□□ -1.37
VPS13D-203ENST00000466732 GDNFP39905 211 aa6.47□□□□□ -1.37
VPS13D-203ENST00000466732 EIF6P56537 245 aaKnown RBP6.47□□□□□ -1.37
VPS13D-203ENST00000466732 ZYXQ15942 572 aaKnown RBP6.47□□□□□ -1.37
VPS13D-203ENST00000466732 RALGPS1Q5JS13 557 aa6.47□□□□□ -1.37
VPS13D-203ENST00000466732 UNC5AQ6ZN44 842 aa6.47□□□□□ -1.37
VPS13D-203ENST00000466732 TTC6Q86TZ1 520 aa6.47□□□□□ -1.37
VPS13D-203ENST00000466732 SYTL5Q8TDW5 730 aaPredicted RBP6.47□□□□□ -1.37
VPS13D-203ENST00000466732 CCDC120Q96HB5 630 aa6.47□□□□□ -1.37
VPS13D-203ENST00000466732 DHRS1Q96LJ7 313 aa6.47□□□□□ -1.37
VPS13D-203ENST00000466732 SRRTQ9BXP5 876 aaKnown RBP6.47□□□□□ -1.37
VPS13D-203ENST00000466732 PRDM14Q9GZV8 571 aa6.47□□□□□ -1.37
VPS13D-203ENST00000466732 RNF114Q9Y508 228 aa6.47□□□□□ -1.37
VPS13D-203ENST00000466732 C9IYK1 514 aa6.46□□□□□ -1.38
VPS13D-203ENST00000466732 GIPRP48546 466 aa6.46□□□□□ -1.38
VPS13D-203ENST00000466732 PMS1P54277 932 aaKnown RBP6.46□□□□□ -1.38
VPS13D-203ENST00000466732 CARMIL2Q6F5E8 1435 aa6.46□□□□□ -1.38
VPS13D-203ENST00000466732 DAGLBQ8NCG7 672 aa6.46□□□□□ -1.38
VPS13D-203ENST00000466732 FAM168AQ92567 244 aa6.46□□□□□ -1.38
VPS13D-203ENST00000466732 SEC16BQ96JE7 1060 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms