RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 OLFML2BQ68BL8 750 aa16.32■□□□□ 0.2
CHD3-207ENST00000466233 GIMAP6Q6P9H5 292 aa16.32■□□□□ 0.2
CHD3-207ENST00000466233 SDR42E1Q8WUS8 393 aa16.32■□□□□ 0.2
CHD3-207ENST00000466233 MROH8Q9H579 483 aa16.32■□□□□ 0.2
CHD3-207ENST00000466233 SLC5A4Q9NY91 659 aa16.32■□□□□ 0.2
CHD3-207ENST00000466233 BTBD7Q9P203 1132 aa16.32■□□□□ 0.2
CHD3-207ENST00000466233 PEX10O60683 326 aa16.31■□□□□ 0.2
CHD3-207ENST00000466233 BOLA2Q9H3K6 86 aa16.31■□□□□ 0.2
CHD3-207ENST00000466233 KANSL2Q9H9L4 492 aa16.31■□□□□ 0.2
CHD3-207ENST00000466233 MPHOSPH10O00566 681 aaKnown RBP16.3■□□□□ 0.2
CHD3-207ENST00000466233 WDR46O15213 610 aaKnown RBP16.3■□□□□ 0.2
CHD3-207ENST00000466233 ATP2B2Q01814 1243 aa16.3■□□□□ 0.2
CHD3-207ENST00000466233 CCL14Q16627 93 aa16.3■□□□□ 0.2
CHD3-207ENST00000466233 C16orf86Q6ZW13 317 aa16.3■□□□□ 0.2
CHD3-207ENST00000466233 SPATC1LQ9H0A9 340 aa16.3■□□□□ 0.2
CHD3-207ENST00000466233 VCPKMTQ9H867 229 aa16.3■□□□□ 0.2
CHD3-207ENST00000466233 ARMT1Q9H993 441 aa16.3■□□□□ 0.2
CHD3-207ENST00000466233 ADAMTS5Q9UNA0 930 aa16.3■□□□□ 0.2
CHD3-207ENST00000466233 PFASO15067 1338 aa16.29■□□□□ 0.2
CHD3-207ENST00000466233 APBB1O00213 710 aa16.29■□□□□ 0.2
CHD3-207ENST00000466233 MBD4O95243 580 aa16.29■□□□□ 0.2
CHD3-207ENST00000466233 CCND3P30281 292 aaPredicted RBP16.29■□□□□ 0.2
CHD3-207ENST00000466233 DSG3P32926 999 aa16.29■□□□□ 0.2
CHD3-207ENST00000466233 CDK8P49336 464 aa16.29■□□□□ 0.2
CHD3-207ENST00000466233 ICA1Q05084 483 aa16.29■□□□□ 0.2
CHD3-207ENST00000466233 SBK1Q52WX2 424 aa16.29■□□□□ 0.2
CHD3-207ENST00000466233 SIAH1Q8IUQ4 282 aa16.29■□□□□ 0.2
CHD3-207ENST00000466233 MOV10L1Q9BXT6 1211 aaKnown RBP16.29■□□□□ 0.2
CHD3-207ENST00000466233 ECHDC1Q9NTX5 307 aa16.29■□□□□ 0.2
CHD3-207ENST00000466233 ARPP21Q9UBL0 812 aaPredicted RBP16.29■□□□□ 0.2
CHD3-207ENST00000466233 STAP2Q9UGK3 403 aa16.29■□□□□ 0.2
CHD3-207ENST00000466233 DDX20Q9UHI6 824 aaKnown RBP16.29■□□□□ 0.2
CHD3-207ENST00000466233 NRBP1Q9UHY1 535 aa16.29■□□□□ 0.2
CHD3-207ENST00000466233 USP17L12C9JPN9 530 aa16.28■□□□□ 0.2
CHD3-207ENST00000466233 USP17L21D6R901 530 aa16.28■□□□□ 0.2
CHD3-207ENST00000466233 SLC25A27O95847 323 aa16.28■□□□□ 0.2
CHD3-207ENST00000466233 ZFYP08048 801 aaPredicted RBP16.28■□□□□ 0.2
CHD3-207ENST00000466233 COPB2P35606 906 aa16.28■□□□□ 0.2
CHD3-207ENST00000466233 LRIT3Q3SXY7 679 aa16.28■□□□□ 0.2
CHD3-207ENST00000466233 DPP9Q86TI2 863 aa16.28■□□□□ 0.2
CHD3-207ENST00000466233 TANGO6Q9C0B7 1094 aa16.28■□□□□ 0.2
CHD3-207ENST00000466233 SYNPO2Q9UMS6 1093 aa16.28■□□□□ 0.2
CHD3-207ENST00000466233 NAV1Q8NEY1 1877 aa16.28■□□□□ 0.2
CHD3-207ENST00000466233 ZNF236Q9UL36 1845 aa16.28■□□□□ 0.2
CHD3-207ENST00000466233 DNM1LO00429 736 aa16.27■□□□□ 0.2
CHD3-207ENST00000466233 PRKAB2O43741 272 aa16.27■□□□□ 0.2
CHD3-207ENST00000466233 LRRFIP1Q32MZ4 808 aaKnown RBP16.27■□□□□ 0.2
CHD3-207ENST00000466233 WDR78Q5VTH9 848 aa16.27■□□□□ 0.2
CHD3-207ENST00000466233 C7orf61Q8IZ16 206 aa16.27■□□□□ 0.2
CHD3-207ENST00000466233 GPATCH3Q96I76 525 aa16.27■□□□□ 0.2
CHD3-207ENST00000466233 DCTPP1Q9H773 170 aa16.27■□□□□ 0.2
CHD3-207ENST00000466233 FLRT1Q9NZU1 646 aa16.27■□□□□ 0.2
CHD3-207ENST00000466233 CYP2D6P10635 497 aa16.26■□□□□ 0.19
CHD3-207ENST00000466233 CYBAP13498 195 aa16.26■□□□□ 0.19
CHD3-207ENST00000466233 AKR1B1P15121 316 aa16.26■□□□□ 0.19
CHD3-207ENST00000466233 GNAT2P19087 354 aa16.26■□□□□ 0.19
CHD3-207ENST00000466233 ERCC3P19447 782 aa16.26■□□□□ 0.19
CHD3-207ENST00000466233 ADORA2AP29274 412 aa16.26■□□□□ 0.19
CHD3-207ENST00000466233 CTR9Q6PD62 1173 aa16.26■□□□□ 0.19
CHD3-207ENST00000466233 KBTBD3Q8NAB2 608 aa16.26■□□□□ 0.19
CHD3-207ENST00000466233 SLC44A5Q8NCS7 719 aa16.26■□□□□ 0.19
CHD3-207ENST00000466233 ARRDC4Q8NCT1 418 aa16.26■□□□□ 0.19
CHD3-207ENST00000466233 NPLOC4Q8TAT6 608 aa16.26■□□□□ 0.19
CHD3-207ENST00000466233 DYNLL2Q96FJ2 89 aa16.26■□□□□ 0.19
CHD3-207ENST00000466233 STRBPQ96SI9 672 aaKnown RBP16.26■□□□□ 0.19
CHD3-207ENST00000466233 GOPCQ9HD26 462 aa16.26■□□□□ 0.19
CHD3-207ENST00000466233 DIS3Q9Y2L1 958 aaKnown RBP16.26■□□□□ 0.19
CHD3-207ENST00000466233 SLC4A4Q9Y6R1 1079 aa16.26■□□□□ 0.19
CHD3-207ENST00000466233 FLOT1O75955 427 aa16.25■□□□□ 0.19
CHD3-207ENST00000466233 PUS7LQ9H0K6 701 aaKnown RBP16.25■□□□□ 0.19
CHD3-207ENST00000466233 ZNF287Q9HBT7 754 aa16.25■□□□□ 0.19
CHD3-207ENST00000466233 SEPT4O43236 478 aa16.24■□□□□ 0.19
CHD3-207ENST00000466233 FCER1AP12319 257 aa16.24■□□□□ 0.19
CHD3-207ENST00000466233 EEF2P13639 858 aaKnown RBP16.24■□□□□ 0.19
CHD3-207ENST00000466233 EVX2Q03828 476 aa16.24■□□□□ 0.19
CHD3-207ENST00000466233 KIAA1755Q5JYT7 1200 aa16.24■□□□□ 0.19
CHD3-207ENST00000466233 C1orf53Q5VUE5 145 aa16.24■□□□□ 0.19
CHD3-207ENST00000466233 RIOX2Q8IUF8 465 aa16.24■□□□□ 0.19
CHD3-207ENST00000466233 TDHQ8IZJ6 230 aa16.24■□□□□ 0.19
CHD3-207ENST00000466233 APPBP2Q92624 585 aa16.24■□□□□ 0.19
CHD3-207ENST00000466233 NYAP2Q9P242 653 aa16.24■□□□□ 0.19
CHD3-207ENST00000466233 A0A0G2JMZ2 1700 aa16.24■□□□□ 0.19
CHD3-207ENST00000466233 ROBO3Q96MS0 1386 aa16.24■□□□□ 0.19
CHD3-207ENST00000466233 ALPK3Q96L96 1907 aa16.23■□□□□ 0.19
CHD3-207ENST00000466233 CYP2C19P33261 490 aa16.23■□□□□ 0.19
CHD3-207ENST00000466233 MAGEA10P43363 369 aaPredicted RBP16.23■□□□□ 0.19
CHD3-207ENST00000466233 LRRC26Q2I0M4 334 aa16.23■□□□□ 0.19
CHD3-207ENST00000466233 MSL3Q8N5Y2 521 aaKnown RBP16.23■□□□□ 0.19
CHD3-207ENST00000466233 RLFQ13129 1914 aa16.23■□□□□ 0.19
CHD3-207ENST00000466233 TTC41PQ6P2S7 1318 aa16.22■□□□□ 0.19
CHD3-207ENST00000466233 SZT2Q5T011 3432 aa16.22■□□□□ 0.19
CHD3-207ENST00000466233 GSG1L2A8MUP6 293 aa16.22■□□□□ 0.19
CHD3-207ENST00000466233 COBLO75128 1261 aa16.22■□□□□ 0.19
CHD3-207ENST00000466233 TMEM132BQ14DG7 1078 aa16.22■□□□□ 0.19
CHD3-207ENST00000466233 TRPV1Q8NER1 839 aa16.22■□□□□ 0.19
CHD3-207ENST00000466233 ATG4CQ96DT6 458 aa16.22■□□□□ 0.19
CHD3-207ENST00000466233 MAML3Q96JK9 1138 aa16.22■□□□□ 0.19
CHD3-207ENST00000466233 PPP1R9AQ9ULJ8 1098 aa16.22■□□□□ 0.19
CHD3-207ENST00000466233 ZMYND8Q9ULU4 1186 aaPredicted RBP16.22■□□□□ 0.19
CHD3-207ENST00000466233 VWA5AO00534 786 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms