RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 CBX8Q9HC52 389 aa21.02■□□□□ 0.95
COL9A3-205ENST00000466192 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.02■□□□□ 0.95
COL9A3-205ENST00000466192 AP5Z1O43299 807 aa21.01■□□□□ 0.95
COL9A3-205ENST00000466192 NPY5RQ15761 445 aa21.01■□□□□ 0.95
COL9A3-205ENST00000466192 PFKFB3Q16875 520 aaPredicted RBP21.01■□□□□ 0.95
COL9A3-205ENST00000466192 RILPL1Q5EBL4 403 aa21.01■□□□□ 0.95
COL9A3-205ENST00000466192 SUPT20HQ8NEM7 779 aa21.01■□□□□ 0.95
COL9A3-205ENST00000466192 SLC16A10Q8TF71 515 aa21.01■□□□□ 0.95
COL9A3-205ENST00000466192 MTMR7Q9Y216 660 aa21.01■□□□□ 0.95
COL9A3-205ENST00000466192 SIPA1L1O43166 1804 aa21.01■□□□□ 0.95
COL9A3-205ENST00000466192 PPIP5K2O43314 1243 aa21■□□□□ 0.95
COL9A3-205ENST00000466192 KCNA3P22001 575 aa21■□□□□ 0.95
COL9A3-205ENST00000466192 CMA1P23946 247 aa21■□□□□ 0.95
COL9A3-205ENST00000466192 MSNP26038 577 aaKnown RBP21■□□□□ 0.95
COL9A3-205ENST00000466192 KRT2P35908 639 aa21■□□□□ 0.95
COL9A3-205ENST00000466192 ERCC4Q92889 916 aaPredicted RBP21■□□□□ 0.95
COL9A3-205ENST00000466192 SDF4Q9BRK5 362 aa21■□□□□ 0.95
COL9A3-205ENST00000466192 CABP5Q9NP86 173 aa21■□□□□ 0.95
COL9A3-205ENST00000466192 FAM205CA6NFA0 338 aa21■□□□□ 0.95
COL9A3-205ENST00000466192 YDJCA8MPS7 323 aa21■□□□□ 0.95
COL9A3-205ENST00000466192 NOVP48745 357 aa21■□□□□ 0.95
COL9A3-205ENST00000466192 HDLBPQ00341 1268 aaKnown RBP21■□□□□ 0.95
COL9A3-205ENST00000466192 SLC35G1Q2M3R5 365 aa21■□□□□ 0.95
COL9A3-205ENST00000466192 RASGRP2Q7LDG7 609 aa21■□□□□ 0.95
COL9A3-205ENST00000466192 JMYQ8N9B5 988 aa21■□□□□ 0.95
COL9A3-205ENST00000466192 SERPINB13Q9UIV8 391 aa21■□□□□ 0.95
COL9A3-205ENST00000466192 NOL7Q9UMY1 257 aaKnown RBP21■□□□□ 0.95
COL9A3-205ENST00000466192 PLIN4Q96Q06 1357 aa20.99■□□□□ 0.95
COL9A3-205ENST00000466192 DPEP1P16444 411 aa20.99■□□□□ 0.95
COL9A3-205ENST00000466192 ZNF165P49910 485 aa20.99■□□□□ 0.95
COL9A3-205ENST00000466192 EARS2Q5JPH6 523 aaKnown RBP20.99■□□□□ 0.95
COL9A3-205ENST00000466192 ZFPM1Q8IX07 1006 aa20.99■□□□□ 0.95
COL9A3-205ENST00000466192 PCDHB6Q9Y5E3 794 aa20.99■□□□□ 0.95
COL9A3-205ENST00000466192 PALM3A6NDB9 673 aaPredicted RBP20.99■□□□□ 0.95
COL9A3-205ENST00000466192 GNAQP50148 359 aa20.99■□□□□ 0.95
COL9A3-205ENST00000466192 CACNB3P54284 484 aa20.99■□□□□ 0.95
COL9A3-205ENST00000466192 CYTH3O43739 400 aa20.98■□□□□ 0.95
COL9A3-205ENST00000466192 PFKFB1P16118 471 aa20.98■□□□□ 0.95
COL9A3-205ENST00000466192 RBM5P52756 815 aaKnown RBP eCLIP20.98■□□□□ 0.951e-6■■■■□ 23.8
COL9A3-205ENST00000466192 SHC4Q6S5L8 630 aa20.98■□□□□ 0.95
COL9A3-205ENST00000466192 TNFRSF25Q93038 417 aa20.98■□□□□ 0.95
COL9A3-205ENST00000466192 CLIC6Q96NY7 704 aa20.98■□□□□ 0.95
COL9A3-205ENST00000466192 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.98■□□□□ 0.95
COL9A3-205ENST00000466192 GREB1LQ9C091 1923 aaPredicted RBP20.98■□□□□ 0.95
COL9A3-205ENST00000466192 A0A087WWV3 80 aa20.97■□□□□ 0.95
COL9A3-205ENST00000466192 TOP1P11387 765 aaKnown RBP20.97■□□□□ 0.95
COL9A3-205ENST00000466192 AKR1B1P15121 316 aa20.97■□□□□ 0.95
COL9A3-205ENST00000466192 CCDC93Q567U6 631 aa20.97■□□□□ 0.95
COL9A3-205ENST00000466192 MYH4Q9Y623 1939 aa20.97■□□□□ 0.95
COL9A3-205ENST00000466192 ZNF202O95125 648 aa20.97■□□□□ 0.95
COL9A3-205ENST00000466192 GOLGA8HP0CJ92 632 aa20.97■□□□□ 0.95
COL9A3-205ENST00000466192 SHMT1P34896 483 aa20.97■□□□□ 0.95
COL9A3-205ENST00000466192 SWAP70Q9UH65 585 aa20.97■□□□□ 0.95
COL9A3-205ENST00000466192 SERPINA10Q9UK55 444 aa20.97■□□□□ 0.95
COL9A3-205ENST00000466192 CUTAO60888 179 aa20.96■□□□□ 0.95
COL9A3-205ENST00000466192 ATP2B1P20020 1258 aa20.96■□□□□ 0.95
COL9A3-205ENST00000466192 STX1AQ16623 288 aa20.96■□□□□ 0.95
COL9A3-205ENST00000466192 NOM1Q5C9Z4 860 aaKnown RBP20.96■□□□□ 0.95
COL9A3-205ENST00000466192 BRMS1Q9HCU9 246 aa20.96■□□□□ 0.95
COL9A3-205ENST00000466192 IGKV6D-41A0A0C4DH26 115 aa20.96■□□□□ 0.95
COL9A3-205ENST00000466192 SLURP2P0DP57 97 aa20.96■□□□□ 0.95
COL9A3-205ENST00000466192 GRIPAP1Q4V328 841 aa20.96■□□□□ 0.95
COL9A3-205ENST00000466192 C11orf57Q6ZUT1 292 aaPredicted RBP20.96■□□□□ 0.95
COL9A3-205ENST00000466192 RTKN2Q8IZC4 609 aa20.96■□□□□ 0.95
COL9A3-205ENST00000466192 GPKOWQ92917 476 aaPredicted RBP eCLIP20.96■□□□□ 0.95
COL9A3-205ENST00000466192 MTMR4Q9NYA4 1195 aa20.96■□□□□ 0.95
COL9A3-205ENST00000466192 FAM198AQ9UFP1 575 aa20.96■□□□□ 0.95
COL9A3-205ENST00000466192 HPSEQ9Y251 543 aa20.96■□□□□ 0.95
COL9A3-205ENST00000466192 ZKSCAN5Q9Y2L8 839 aa20.96■□□□□ 0.95
COL9A3-205ENST00000466192 COL4A5P29400 1685 aa20.95■□□□□ 0.95
COL9A3-205ENST00000466192 KLRF2D3W0D1 207 aa20.95■□□□□ 0.94
COL9A3-205ENST00000466192 ADAMTS3O15072 1205 aa20.95■□□□□ 0.94
COL9A3-205ENST00000466192 HLA-DOAP06340 250 aa20.95■□□□□ 0.94
COL9A3-205ENST00000466192 NLRP5P59047 1200 aa20.95■□□□□ 0.94
COL9A3-205ENST00000466192 TCP10Q12799 353 aa20.95■□□□□ 0.94
COL9A3-205ENST00000466192 RESP18Q5W5W9 173 aa20.95■□□□□ 0.94
COL9A3-205ENST00000466192 KRI1Q8N9T8 703 aaKnown RBP20.95■□□□□ 0.94
COL9A3-205ENST00000466192 PSMD1Q99460 953 aa20.95■□□□□ 0.94
COL9A3-205ENST00000466192 IDI2Q9BXS1 227 aa20.95■□□□□ 0.94
COL9A3-205ENST00000466192 MYO3BQ8WXR4 1341 aa20.95■□□□□ 0.94
COL9A3-205ENST00000466192 FAM237AA0A1B0GTK4 181 aa20.95■□□□□ 0.94
COL9A3-205ENST00000466192 CAVIN2O95810 425 aa20.95■□□□□ 0.94
COL9A3-205ENST00000466192 USP17L2Q6R6M4 530 aa20.95■□□□□ 0.94
COL9A3-205ENST00000466192 CPVLQ9H3G5 476 aa20.95■□□□□ 0.94
COL9A3-205ENST00000466192 FBXO2Q9UK22 296 aaPredicted RBP20.95■□□□□ 0.94
COL9A3-205ENST00000466192 PARP1P09874 1014 aaKnown RBP20.94■□□□□ 0.94
COL9A3-205ENST00000466192 CLEC10AQ8IUN9 316 aa20.94■□□□□ 0.94
COL9A3-205ENST00000466192 LZTS2Q9BRK4 669 aa20.94■□□□□ 0.94
COL9A3-205ENST00000466192 EHD4Q9H223 541 aa20.94■□□□□ 0.94
COL9A3-205ENST00000466192 WNT7AO00755 349 aa20.93■□□□□ 0.94
COL9A3-205ENST00000466192 PTPREP23469 700 aa20.93■□□□□ 0.94
COL9A3-205ENST00000466192 SYKP43405 635 aa20.93■□□□□ 0.94
COL9A3-205ENST00000466192 GRIN1Q05586 938 aa20.93■□□□□ 0.94
COL9A3-205ENST00000466192 TYW1BQ6NUM6 668 aa20.93■□□□□ 0.94
COL9A3-205ENST00000466192 DNAJC18Q9H819 358 aa20.93■□□□□ 0.94
COL9A3-205ENST00000466192 SH3GLB2Q9NR46 395 aa20.93■□□□□ 0.94
COL9A3-205ENST00000466192 DDTLA6NHG4 134 aaPredicted RBP20.93■□□□□ 0.94
COL9A3-205ENST00000466192 TRIM75PA6NK02 468 aa20.93■□□□□ 0.94
COL9A3-205ENST00000466192 ZBTB7AO95365 584 aa20.93■□□□□ 0.94
COL9A3-205ENST00000466192 SPZ1Q9BXG8 430 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms