RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 FAM196BA6NMK8 535 aa16.79■□□□□ 0.28
COL5A1-205ENST00000464187 H7C1D1 291 aa16.79■□□□□ 0.28
COL5A1-205ENST00000464187 MSNP26038 577 aaKnown RBP16.79■□□□□ 0.28
COL5A1-205ENST00000464187 C9orf131Q5VYM1 1079 aa16.79■□□□□ 0.28
COL5A1-205ENST00000464187 FAM83AQ86UY5 434 aa16.79■□□□□ 0.28
COL5A1-205ENST00000464187 FOXP4Q8IVH2 680 aaPredicted RBP16.79■□□□□ 0.28
COL5A1-205ENST00000464187 FAM217BQ9NTX9 383 aaPredicted RBP16.79■□□□□ 0.28
COL5A1-205ENST00000464187 STX8Q9UNK0 236 aa16.79■□□□□ 0.28
COL5A1-205ENST00000464187 CNTNAP1P78357 1384 aa16.79■□□□□ 0.28
COL5A1-205ENST00000464187 NID2Q14112 1375 aa16.79■□□□□ 0.28
COL5A1-205ENST00000464187 AKR1B1P15121 316 aa16.78■□□□□ 0.28
COL5A1-205ENST00000464187 TROAPQ12815 778 aa16.78■□□□□ 0.28
COL5A1-205ENST00000464187 KIF4BQ2VIQ3 1234 aa16.78■□□□□ 0.28
COL5A1-205ENST00000464187 METTL16Q86W50 562 aaKnown RBP16.78■□□□□ 0.28
COL5A1-205ENST00000464187 FANCBQ8NB91 859 aa16.78■□□□□ 0.28
COL5A1-205ENST00000464187 ANKS1AQ92625 1134 aa16.78■□□□□ 0.28
COL5A1-205ENST00000464187 TRIM34Q9BYJ4 488 aa16.78■□□□□ 0.28
COL5A1-205ENST00000464187 GOLPH3LQ9H4A5 285 aa16.78■□□□□ 0.28
COL5A1-205ENST00000464187 GJB4Q9NTQ9 266 aa16.78■□□□□ 0.28
COL5A1-205ENST00000464187 GPRC5DQ9NZD1 345 aa16.78■□□□□ 0.28
COL5A1-205ENST00000464187 SBF1O95248 1867 aa16.77■□□□□ 0.28
COL5A1-205ENST00000464187 ADCY5O95622 1261 aa16.77■□□□□ 0.28
COL5A1-205ENST00000464187 RTN1Q16799 776 aa16.77■□□□□ 0.28
COL5A1-205ENST00000464187 CCAR1Q8IX12 1150 aaKnown RBP16.77■□□□□ 0.28
COL5A1-205ENST00000464187 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.77■□□□□ 0.28
COL5A1-205ENST00000464187 TMEM39BQ9GZU3 492 aa16.77■□□□□ 0.28
COL5A1-205ENST00000464187 KAT14Q9H8E8 782 aa16.77■□□□□ 0.28
COL5A1-205ENST00000464187 RTEL1Q9NZ71 1219 aa16.77■□□□□ 0.28
COL5A1-205ENST00000464187 TAOK2Q9UL54 1235 aa16.77■□□□□ 0.28
COL5A1-205ENST00000464187 ZKSCAN5Q9Y2L8 839 aa16.77■□□□□ 0.28
COL5A1-205ENST00000464187 DICER1Q9UPY3 1922 aaKnown RBP16.77■□□□□ 0.28
COL5A1-205ENST00000464187 KIF28PB7ZC32 967 aa16.77■□□□□ 0.27
COL5A1-205ENST00000464187 DDAH1O94760 285 aa16.77■□□□□ 0.27
COL5A1-205ENST00000464187 DDNO94850 711 aaPredicted RBP16.77■□□□□ 0.27
COL5A1-205ENST00000464187 NTRK3Q16288 839 aa16.77■□□□□ 0.27
COL5A1-205ENST00000464187 CPLX2Q6PUV4 134 aaKnown RBP16.77■□□□□ 0.27
COL5A1-205ENST00000464187 RGS22Q8NE09 1264 aa16.77■□□□□ 0.27
COL5A1-205ENST00000464187 FAM200AQ8TCP9 573 aa16.77■□□□□ 0.27
COL5A1-205ENST00000464187 CEP95Q96GE4 821 aa16.77■□□□□ 0.27
COL5A1-205ENST00000464187 PLIN4Q96Q06 1357 aa16.77■□□□□ 0.27
COL5A1-205ENST00000464187 CCDC196A0A1B0GTZ2 297 aa16.76■□□□□ 0.27
COL5A1-205ENST00000464187 CDKL5O76039 1030 aa16.76■□□□□ 0.27
COL5A1-205ENST00000464187 CALM1P0DP23 149 aa16.76■□□□□ 0.27
COL5A1-205ENST00000464187 CALM2P0DP24 149 aa16.76■□□□□ 0.27
COL5A1-205ENST00000464187 CALM3P0DP25 149 aa16.76■□□□□ 0.27
COL5A1-205ENST00000464187 KIF23Q02241 960 aaPredicted RBP16.76■□□□□ 0.27
COL5A1-205ENST00000464187 PPP2R5BQ15173 497 aa16.76■□□□□ 0.27
COL5A1-205ENST00000464187 TATDN1Q6P1N9 297 aa16.76■□□□□ 0.27
COL5A1-205ENST00000464187 BRAPQ7Z569 592 aa16.76■□□□□ 0.27
COL5A1-205ENST00000464187 PNMA1Q8ND90 353 aa16.76■□□□□ 0.27
COL5A1-205ENST00000464187 CCDC17Q96LX7 622 aa16.76■□□□□ 0.27
COL5A1-205ENST00000464187 AIFM3Q96NN9 605 aa16.76■□□□□ 0.27
COL5A1-205ENST00000464187 SCAF8Q9UPN6 1271 aaKnown RBP16.76■□□□□ 0.27
COL5A1-205ENST00000464187 MPHOSPH10O00566 681 aaKnown RBP16.75■□□□□ 0.27
COL5A1-205ENST00000464187 SOCS7O14512 581 aa16.75■□□□□ 0.27
COL5A1-205ENST00000464187 AP5Z1O43299 807 aa16.75■□□□□ 0.27
COL5A1-205ENST00000464187 EPS15P42566 896 aa16.75■□□□□ 0.27
COL5A1-205ENST00000464187 TNNI2P48788 182 aa16.75■□□□□ 0.27
COL5A1-205ENST00000464187 TNFAIP1Q13829 316 aa16.75■□□□□ 0.27
COL5A1-205ENST00000464187 CERKLQ49MI3 558 aaPredicted RBP16.75■□□□□ 0.27
COL5A1-205ENST00000464187 MYSM1Q5VVJ2 828 aa16.75■□□□□ 0.27
COL5A1-205ENST00000464187 CDAN1Q8IWY9 1227 aa16.75■□□□□ 0.27
COL5A1-205ENST00000464187 PHKBQ93100 1093 aa16.75■□□□□ 0.27
COL5A1-205ENST00000464187 TMEM47Q9BQJ4 181 aa16.75■□□□□ 0.27
COL5A1-205ENST00000464187 ALG1Q9BT22 464 aa16.75■□□□□ 0.27
COL5A1-205ENST00000464187 MTMR4Q9NYA4 1195 aa16.75■□□□□ 0.27
COL5A1-205ENST00000464187 HERC5Q9UII4 1024 aaKnown RBP16.75■□□□□ 0.27
COL5A1-205ENST00000464187 HACL1Q9UJ83 578 aa16.75■□□□□ 0.27
COL5A1-205ENST00000464187 ASTN2O75129 1339 aaPredicted RBP16.75■□□□□ 0.27
COL5A1-205ENST00000464187 SIPA1L1O43166 1804 aa16.75■□□□□ 0.27
COL5A1-205ENST00000464187 PTMAP06454 111 aaKnown RBP16.75■□□□□ 0.27
COL5A1-205ENST00000464187 ME1P48163 572 aa16.75■□□□□ 0.27
COL5A1-205ENST00000464187 NOVP48745 357 aa16.75■□□□□ 0.27
COL5A1-205ENST00000464187 SNW1Q13573 536 aaKnown RBP16.75■□□□□ 0.27
COL5A1-205ENST00000464187 RASA3Q14644 834 aa16.75■□□□□ 0.27
COL5A1-205ENST00000464187 ANO6Q4KMQ2 910 aa16.75■□□□□ 0.27
COL5A1-205ENST00000464187 CLIC4Q9Y696 253 aa16.75■□□□□ 0.27
COL5A1-205ENST00000464187 IGKV6D-41A0A0C4DH26 115 aa16.74■□□□□ 0.27
COL5A1-205ENST00000464187 GRIN3BO60391 1043 aa16.74■□□□□ 0.27
COL5A1-205ENST00000464187 IFNAR1P17181 557 aa16.74■□□□□ 0.27
COL5A1-205ENST00000464187 CCDC73Q6ZRK6 1079 aa16.74■□□□□ 0.27
COL5A1-205ENST00000464187 FSIP1Q8NA03 581 aa16.74■□□□□ 0.27
COL5A1-205ENST00000464187 LINC00301Q8NCQ3 95 aa16.74■□□□□ 0.27
COL5A1-205ENST00000464187 ENGASEQ8NFI3 743 aa16.74■□□□□ 0.27
COL5A1-205ENST00000464187 TRPM4Q8TD43 1214 aa16.74■□□□□ 0.27
COL5A1-205ENST00000464187 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.74■□□□□ 0.27
COL5A1-205ENST00000464187 POLR3EQ9NVU0 708 aa16.74■□□□□ 0.27
COL5A1-205ENST00000464187 PGAP2Q9UHJ9 254 aa16.74■□□□□ 0.27
COL5A1-205ENST00000464187 PCDHA7Q9UN72 937 aa16.74■□□□□ 0.27
COL5A1-205ENST00000464187 STK36Q9NRP7 1315 aa16.73■□□□□ 0.27
COL5A1-205ENST00000464187 ZNF500O60304 480 aaPredicted RBP16.73■□□□□ 0.27
COL5A1-205ENST00000464187 CMTR1Q8N1G2 835 aaKnown RBP16.73■□□□□ 0.27
COL5A1-205ENST00000464187 CCDC82Q8N4S0 544 aa16.73■□□□□ 0.27
COL5A1-205ENST00000464187 CTCFLQ8NI51 663 aaPredicted RBP16.73■□□□□ 0.27
COL5A1-205ENST00000464187 RBM28Q9NW13 759 aaKnown RBP16.73■□□□□ 0.27
COL5A1-205ENST00000464187 YEATS4O95619 227 aa16.73■□□□□ 0.27
COL5A1-205ENST00000464187 TOP1P11387 765 aaKnown RBP16.73■□□□□ 0.27
COL5A1-205ENST00000464187 FAM160A1Q05DH4 1040 aa16.73■□□□□ 0.27
COL5A1-205ENST00000464187 SHROOM1Q2M3G4 852 aaPredicted RBP16.73■□□□□ 0.27
COL5A1-205ENST00000464187 SASS6Q6UVJ0 657 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms