RNA–Protein interactions for RNA: ENST00000463741.1

SREBF2-205, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 634 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-205ENST00000463741 TMED8Q6PL24 325 aaPredicted RBP18.3■□□□□ 0.52
SREBF2-205ENST00000463741 ERC1Q8IUD2 1116 aa18.3■□□□□ 0.52
SREBF2-205ENST00000463741 GUCD1Q96NT3 240 aa18.3■□□□□ 0.52
SREBF2-205ENST00000463741 CRNKL1Q9BZJ0 848 aaKnown RBP18.3■□□□□ 0.52
SREBF2-205ENST00000463741 PRDM5Q9NQX1 630 aaPredicted RBP18.3■□□□□ 0.52
SREBF2-205ENST00000463741 MCM9Q9NXL9 1143 aa18.3■□□□□ 0.52
SREBF2-205ENST00000463741 A0A1W2PRG0 241 aa18.29■□□□□ 0.52
SREBF2-205ENST00000463741 KBTBD13C9JR72 458 aa18.29■□□□□ 0.52
SREBF2-205ENST00000463741 ERCC3P19447 782 aa18.29■□□□□ 0.52
SREBF2-205ENST00000463741 GABPAQ06546 454 aa18.29■□□□□ 0.52
SREBF2-205ENST00000463741 COG2Q14746 738 aa18.29■□□□□ 0.52
SREBF2-205ENST00000463741 SLC9C2Q5TAH2 1124 aa18.29■□□□□ 0.52
SREBF2-205ENST00000463741 OLFML2BQ68BL8 750 aa18.29■□□□□ 0.52
SREBF2-205ENST00000463741 SDR42E1Q8WUS8 393 aa18.29■□□□□ 0.52
SREBF2-205ENST00000463741 SPATC1LQ9H0A9 340 aa18.29■□□□□ 0.52
SREBF2-205ENST00000463741 RLFQ13129 1914 aa18.29■□□□□ 0.52
SREBF2-205ENST00000463741 MYH8P13535 1937 aa18.28■□□□□ 0.52
SREBF2-205ENST00000463741 POTEB2H3BUK9 544 aa18.28■□□□□ 0.52
SREBF2-205ENST00000463741 PDE6AP16499 860 aa18.28■□□□□ 0.52
SREBF2-205ENST00000463741 PLS1Q14651 629 aa18.28■□□□□ 0.52
SREBF2-205ENST00000463741 TTF1Q15361 905 aaPredicted RBP18.28■□□□□ 0.52
SREBF2-205ENST00000463741 ZNF697Q5TEC3 545 aa18.28■□□□□ 0.52
SREBF2-205ENST00000463741 FAM109BQ6ICB4 259 aaPredicted RBP18.28■□□□□ 0.52
SREBF2-205ENST00000463741 SAMD1Q6SPF0 538 aaPredicted RBP18.28■□□□□ 0.52
SREBF2-205ENST00000463741 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.28■□□□□ 0.52
SREBF2-205ENST00000463741 SLC44A5Q8NCS7 719 aa18.28■□□□□ 0.52
SREBF2-205ENST00000463741 ARRDC4Q8NCT1 418 aa18.28■□□□□ 0.52
SREBF2-205ENST00000463741 IL1RAPL2Q9NP60 686 aa18.28■□□□□ 0.52
SREBF2-205ENST00000463741 HOXC10Q9NYD6 342 aa18.28■□□□□ 0.52
SREBF2-205ENST00000463741 ZNF532Q9HCE3 1301 aa18.27■□□□□ 0.52
SREBF2-205ENST00000463741 STRNO43815 780 aa18.27■□□□□ 0.52
SREBF2-205ENST00000463741 IGHA2P01877 340 aa18.27■□□□□ 0.52
SREBF2-205ENST00000463741 CYP2D6P10635 497 aa18.27■□□□□ 0.52
SREBF2-205ENST00000463741 NCAPG2Q86XI2 1143 aa18.27■□□□□ 0.52
SREBF2-205ENST00000463741 CLEC10AQ8IUN9 316 aa18.27■□□□□ 0.52
SREBF2-205ENST00000463741 LCORLQ8N3X6 602 aa18.27■□□□□ 0.52
SREBF2-205ENST00000463741 DNAJC2Q99543 621 aaKnown RBP18.27■□□□□ 0.52
SREBF2-205ENST00000463741 BCL11AQ9H165 835 aa18.27■□□□□ 0.52
SREBF2-205ENST00000463741 SEPT4O43236 478 aa18.26■□□□□ 0.51
SREBF2-205ENST00000463741 COBLO75128 1261 aa18.26■□□□□ 0.51
SREBF2-205ENST00000463741 FLOT1O75955 427 aa18.26■□□□□ 0.51
SREBF2-205ENST00000463741 TRIM60Q495X7 471 aa18.26■□□□□ 0.51
SREBF2-205ENST00000463741 KIAA1755Q5JYT7 1200 aa18.26■□□□□ 0.51
SREBF2-205ENST00000463741 SLC39A5Q6ZMH5 540 aa18.26■□□□□ 0.51
SREBF2-205ENST00000463741 TMEM179Q6ZVK1 233 aa18.26■□□□□ 0.51
SREBF2-205ENST00000463741 SPICE1Q8N0Z3 855 aa18.26■□□□□ 0.51
SREBF2-205ENST00000463741 MB21D1Q8N884 522 aa18.26■□□□□ 0.51
SREBF2-205ENST00000463741 SHCBP1Q8NEM2 672 aa18.26■□□□□ 0.51
SREBF2-205ENST00000463741 COL25A1Q9BXS0 654 aaPredicted RBP18.26■□□□□ 0.51
SREBF2-205ENST00000463741 SLC5A4Q9NY91 659 aa18.26■□□□□ 0.51
SREBF2-205ENST00000463741 LAMA2P24043 3122 aaKnown RBP18.25■□□□□ 0.51
SREBF2-205ENST00000463741 GOLIM4O00461 696 aa18.25■□□□□ 0.51
SREBF2-205ENST00000463741 ICA1Q05084 483 aa18.25■□□□□ 0.51
SREBF2-205ENST00000463741 FAM47AQ5JRC9 791 aa18.25■□□□□ 0.51
SREBF2-205ENST00000463741 PRAMEF19Q5SWL8 479 aa18.25■□□□□ 0.51
SREBF2-205ENST00000463741 FERMT2Q96AC1 680 aa18.25■□□□□ 0.51
SREBF2-205ENST00000463741 ATG4CQ96DT6 458 aa18.25■□□□□ 0.51
SREBF2-205ENST00000463741 ARHGEF10LQ9HCE6 1279 aa18.25■□□□□ 0.51
SREBF2-205ENST00000463741 DCP1AQ9NPI6 582 aaPredicted RBP18.25■□□□□ 0.51
SREBF2-205ENST00000463741 APBB1O00213 710 aa18.24■□□□□ 0.51
SREBF2-205ENST00000463741 DSG3P32926 999 aa18.24■□□□□ 0.51
SREBF2-205ENST00000463741 SHHQ15465 462 aa18.24■□□□□ 0.51
SREBF2-205ENST00000463741 C9orf50Q5SZB4 431 aa18.24■□□□□ 0.51
SREBF2-205ENST00000463741 RHPN1Q8TCX5 695 aa18.24■□□□□ 0.51
SREBF2-205ENST00000463741 BADQ92934 168 aa18.24■□□□□ 0.51
SREBF2-205ENST00000463741 DYNLL2Q96FJ2 89 aa18.24■□□□□ 0.51
SREBF2-205ENST00000463741 MROH8Q9H579 483 aa18.24■□□□□ 0.51
SREBF2-205ENST00000463741 ARMT1Q9H993 441 aa18.24■□□□□ 0.51
SREBF2-205ENST00000463741 PDLIM7Q9NR12 457 aa18.24■□□□□ 0.51
SREBF2-205ENST00000463741 SWAP70Q9UH65 585 aa18.24■□□□□ 0.51
SREBF2-205ENST00000463741 PARP14Q460N5 1801 aa18.23■□□□□ 0.51
SREBF2-205ENST00000463741 TCRBV5S4A2TA0A5A2 114 aa18.23■□□□□ 0.51
SREBF2-205ENST00000463741 AKR1B1P15121 316 aa18.23■□□□□ 0.51
SREBF2-205ENST00000463741 ADCYAP1R1P41586 468 aa18.23■□□□□ 0.51
SREBF2-205ENST00000463741 SNX17Q15036 470 aa18.23■□□□□ 0.51
SREBF2-205ENST00000463741 HSP90AB4PQ58FF6 505 aa18.23■□□□□ 0.51
SREBF2-205ENST00000463741 MAML3Q96JK9 1138 aa18.23■□□□□ 0.51
SREBF2-205ENST00000463741 SH2D4AQ9H788 454 aa18.23■□□□□ 0.51
SREBF2-205ENST00000463741 BAZ2AQ9UIF9 1905 aaKnown RBP18.22■□□□□ 0.51
SREBF2-205ENST00000463741 FCER1AP12319 257 aa18.22■□□□□ 0.51
SREBF2-205ENST00000463741 LRRC41Q15345 812 aa18.22■□□□□ 0.51
SREBF2-205ENST00000463741 ABRAQ8N0Z2 381 aa18.22■□□□□ 0.51
SREBF2-205ENST00000463741 CLASRPQ8N2M8 674 aaKnown RBP18.22■□□□□ 0.51
SREBF2-205ENST00000463741 VCPKMTQ9H867 229 aa18.22■□□□□ 0.51
SREBF2-205ENST00000463741 TMX2Q9Y320 296 aa18.22■□□□□ 0.51
SREBF2-205ENST00000463741 COL11A1P12107 1806 aaPredicted RBP18.21■□□□□ 0.51
SREBF2-205ENST00000463741 WDR46O15213 610 aaKnown RBP18.21■□□□□ 0.51
SREBF2-205ENST00000463741 PRKAB2O43741 272 aa18.21■□□□□ 0.51
SREBF2-205ENST00000463741 MBD4O95243 580 aa18.21■□□□□ 0.51
SREBF2-205ENST00000463741 IFIT2P09913 472 aaKnown RBP18.21■□□□□ 0.51
SREBF2-205ENST00000463741 HNRNPUQ00839 825 aaKnown RBP eCLIP18.21■□□□□ 0.51
SREBF2-205ENST00000463741 SH3RF1Q7Z6J0 888 aa18.21■□□□□ 0.51
SREBF2-205ENST00000463741 PANK1Q8TE04 598 aa18.21■□□□□ 0.51
SREBF2-205ENST00000463741 CDX2Q99626 313 aaPredicted RBP18.21■□□□□ 0.51
SREBF2-205ENST00000463741 CDH23Q9H251 3354 aa18.2■□□□□ 0.5
SREBF2-205ENST00000463741 CYP2D7A0A087X1C5 515 aa18.2■□□□□ 0.5
SREBF2-205ENST00000463741 TMEM132BQ14DG7 1078 aa18.2■□□□□ 0.5
SREBF2-205ENST00000463741 SLFNL1Q499Z3 407 aa18.2■□□□□ 0.5
SREBF2-205ENST00000463741 SIAH1Q8IUQ4 282 aa18.2■□□□□ 0.5
SREBF2-205ENST00000463741 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms