RNA–Protein interactions for RNA: ENST00000462996.1

PTPN18-208, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-208ENST00000462996 GPR108Q9NPR9 543 aa24.63■■□□□ 1.53
PTPN18-208ENST00000462996 TMEM265A0A087WTH1 108 aa24.62■■□□□ 1.53
PTPN18-208ENST00000462996 GNAI2P04899 355 aa24.62■■□□□ 1.53
PTPN18-208ENST00000462996 ERCC3P19447 782 aa24.62■■□□□ 1.53
PTPN18-208ENST00000462996 SHMT1P34896 483 aa24.62■■□□□ 1.53
PTPN18-208ENST00000462996 USP5P45974 858 aa24.62■■□□□ 1.53
PTPN18-208ENST00000462996 GRIN2CQ14957 1233 aa24.62■■□□□ 1.53
PTPN18-208ENST00000462996 FAM47AQ5JRC9 791 aa24.62■■□□□ 1.53
PTPN18-208ENST00000462996 ARHGAP45Q92619 1136 aa24.62■■□□□ 1.53
PTPN18-208ENST00000462996 RNPC3Q96LT9 517 aaKnown RBP24.62■■□□□ 1.53
PTPN18-208ENST00000462996 SPATC1LQ9H0A9 340 aa24.62■■□□□ 1.53
PTPN18-208ENST00000462996 IGSF3O75054 1194 aa24.61■■□□□ 1.53
PTPN18-208ENST00000462996 RARSP54136 660 aaKnown RBP24.61■■□□□ 1.53
PTPN18-208ENST00000462996 COG2Q14746 738 aa24.61■■□□□ 1.53
PTPN18-208ENST00000462996 ZNF512BQ96KM6 892 aaPredicted RBP24.61■■□□□ 1.53
PTPN18-208ENST00000462996 CABP5Q9NP86 173 aa24.61■■□□□ 1.53
PTPN18-208ENST00000462996 COL9A1P20849 921 aa24.6■■□□□ 1.53
PTPN18-208ENST00000462996 PLCD1P51178 756 aa24.6■■□□□ 1.53
PTPN18-208ENST00000462996 SEPT2Q15019 361 aa24.6■■□□□ 1.53
PTPN18-208ENST00000462996 TJAP1Q5JTD0 557 aa24.6■■□□□ 1.53
PTPN18-208ENST00000462996 SHCBP1Q8NEM2 672 aa24.6■■□□□ 1.53
PTPN18-208ENST00000462996 HOXC10Q9NYD6 342 aa24.6■■□□□ 1.53
PTPN18-208ENST00000462996 TACC3Q9Y6A5 838 aa24.6■■□□□ 1.53
PTPN18-208ENST00000462996 ZNFX1Q9P2E3 1918 aaKnown RBP24.59■■□□□ 1.53
PTPN18-208ENST00000462996 A0A1W2PRG0 241 aa24.59■■□□□ 1.53
PTPN18-208ENST00000462996 TTC6Q86TZ1 520 aa24.59■■□□□ 1.53
PTPN18-208ENST00000462996 PHF24Q9UPV7 400 aa24.59■■□□□ 1.53
PTPN18-208ENST00000462996 A0A0G2JMZ2 1700 aa24.58■■□□□ 1.53
PTPN18-208ENST00000462996 IDH1O75874 414 aaKnown RBP24.58■■□□□ 1.53
PTPN18-208ENST00000462996 CLTBP09497 229 aa24.58■■□□□ 1.53
PTPN18-208ENST00000462996 MAML3Q96JK9 1138 aa24.58■■□□□ 1.53
PTPN18-208ENST00000462996 TNNQ9UQP3 1299 aa24.58■■□□□ 1.53
PTPN18-208ENST00000462996 TNFRSF10AO00220 468 aa24.57■■□□□ 1.52
PTPN18-208ENST00000462996 KIAA0355O15063 1070 aa24.57■■□□□ 1.52
PTPN18-208ENST00000462996 KIAA1755Q5JYT7 1200 aa24.57■■□□□ 1.52
PTPN18-208ENST00000462996 MAGEB6Q8N7X4 407 aa24.57■■□□□ 1.52
PTPN18-208ENST00000462996 DNAJB2P25686 324 aa24.56■■□□□ 1.52
PTPN18-208ENST00000462996 POLA2Q14181 598 aa24.56■■□□□ 1.52
PTPN18-208ENST00000462996 CERS3Q8IU89 383 aa24.56■■□□□ 1.52
PTPN18-208ENST00000462996 ABRAQ8N0Z2 381 aa24.56■■□□□ 1.52
PTPN18-208ENST00000462996 TANGO6Q9C0B7 1094 aa24.56■■□□□ 1.52
PTPN18-208ENST00000462996 SLC5A4Q9NY91 659 aa24.56■■□□□ 1.52
PTPN18-208ENST00000462996 TLR7Q9NYK1 1049 aaKnown RBP24.56■■□□□ 1.52
PTPN18-208ENST00000462996 RAPGEFL1Q9UHV5 662 aa24.56■■□□□ 1.52
PTPN18-208ENST00000462996 DBNLQ9UJU6 430 aaKnown RBP24.56■■□□□ 1.52
PTPN18-208ENST00000462996 RAG1P15918 1043 aa24.55■■□□□ 1.52
PTPN18-208ENST00000462996 EVX2Q03828 476 aa24.55■■□□□ 1.52
PTPN18-208ENST00000462996 GABPAQ06546 454 aa24.55■■□□□ 1.52
PTPN18-208ENST00000462996 NCAPG2Q86XI2 1143 aa24.55■■□□□ 1.52
PTPN18-208ENST00000462996 MROH8Q9H579 483 aa24.55■■□□□ 1.52
PTPN18-208ENST00000462996 XPNPEP3Q9NQH7 507 aa24.55■■□□□ 1.52
PTPN18-208ENST00000462996 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.54■■□□□ 1.52
PTPN18-208ENST00000462996 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.54■■□□□ 1.52
PTPN18-208ENST00000462996 TRIM27P14373 513 aa24.54■■□□□ 1.52
PTPN18-208ENST00000462996 DSG3P32926 999 aa24.54■■□□□ 1.52
PTPN18-208ENST00000462996 PLS1Q14651 629 aa24.54■■□□□ 1.52
PTPN18-208ENST00000462996 ZNF576Q9H609 170 aa24.54■■□□□ 1.52
PTPN18-208ENST00000462996 CHD9Q3L8U1 2897 aa24.54■■□□□ 1.52
PTPN18-208ENST00000462996 PQBP1O60828 265 aaKnown RBP24.53■■□□□ 1.52
PTPN18-208ENST00000462996 PGK1P00558 417 aa24.53■■□□□ 1.52
PTPN18-208ENST00000462996 FPGSQ05932 587 aa24.53■■□□□ 1.52
PTPN18-208ENST00000462996 OS9Q13438 667 aaPredicted RBP24.53■■□□□ 1.52
PTPN18-208ENST00000462996 MB21D1Q8N884 522 aa24.53■■□□□ 1.52
PTPN18-208ENST00000462996 CCDC8Q9H0W5 538 aaPredicted RBP24.53■■□□□ 1.52
PTPN18-208ENST00000462996 ANTXR1Q9H6X2 564 aa24.53■■□□□ 1.52
PTPN18-208ENST00000462996 MYO9BQ13459 2157 aa24.52■■□□□ 1.52
PTPN18-208ENST00000462996 A0A1W2PQ45 241 aaPredicted RBP24.52■■□□□ 1.52
PTPN18-208ENST00000462996 A0A1W2PQY0 241 aa24.52■■□□□ 1.52
PTPN18-208ENST00000462996 MPHOSPH10O00566 681 aaKnown RBP24.52■■□□□ 1.52
PTPN18-208ENST00000462996 RARBP10826 455 aa24.52■■□□□ 1.52
PTPN18-208ENST00000462996 ATG4CQ96DT6 458 aa24.52■■□□□ 1.52
PTPN18-208ENST00000462996 RIOK1Q9BRS2 568 aaKnown RBP24.52■■□□□ 1.52
PTPN18-208ENST00000462996 TMEM39AQ9NV64 488 aa24.52■■□□□ 1.52
PTPN18-208ENST00000462996 SURF6O75683 361 aaKnown RBP24.51■■□□□ 1.51
PTPN18-208ENST00000462996 POLR3DP05423 398 aaPredicted RBP24.51■■□□□ 1.51
PTPN18-208ENST00000462996 FCER1AP12319 257 aa24.51■■□□□ 1.51
PTPN18-208ENST00000462996 TAL1P17542 331 aaPredicted RBP24.51■■□□□ 1.51
PTPN18-208ENST00000462996 FAAP100Q0VG06 881 aa24.51■■□□□ 1.51
PTPN18-208ENST00000462996 RNF180Q86T96 592 aa24.51■■□□□ 1.51
PTPN18-208ENST00000462996 SSH3Q8TE77 659 aa24.51■■□□□ 1.51
PTPN18-208ENST00000462996 NRBP1Q9UHY1 535 aa24.51■■□□□ 1.51
PTPN18-208ENST00000462996 SIAH1Q8IUQ4 282 aa24.5■■□□□ 1.51
PTPN18-208ENST00000462996 TIFAQ96CG3 184 aa24.5■■□□□ 1.51
PTPN18-208ENST00000462996 EAF2Q96CJ1 260 aaPredicted RBP24.5■■□□□ 1.51
PTPN18-208ENST00000462996 PARP14Q460N5 1801 aa24.49■■□□□ 1.51
PTPN18-208ENST00000462996 BCAR3O75815 825 aa24.49■■□□□ 1.51
PTPN18-208ENST00000462996 FLOT1O75955 427 aa24.49■■□□□ 1.51
PTPN18-208ENST00000462996 PGK2P07205 417 aa24.49■■□□□ 1.51
PTPN18-208ENST00000462996 ATP8B2P98198 1209 aa24.49■■□□□ 1.51
PTPN18-208ENST00000462996 ANKRD33Q7Z3H0 272 aa24.49■■□□□ 1.51
PTPN18-208ENST00000462996 CLUAP1Q96AJ1 413 aa24.49■■□□□ 1.51
PTPN18-208ENST00000462996 LENG1Q96BZ8 264 aaPredicted RBP24.49■■□□□ 1.51
PTPN18-208ENST00000462996 COL11A1P12107 1806 aaPredicted RBP24.49■■□□□ 1.51
PTPN18-208ENST00000462996 NAV1Q8NEY1 1877 aa24.49■■□□□ 1.51
PTPN18-208ENST00000462996 PLXNA1Q9UIW2 1896 aa24.49■■□□□ 1.51
PTPN18-208ENST00000462996 ZNF865P0CJ78 1059 aaPredicted RBP24.48■■□□□ 1.51
PTPN18-208ENST00000462996 MAP3K12Q12852 859 aa24.48■■□□□ 1.51
PTPN18-208ENST00000462996 TMEM132BQ14DG7 1078 aa24.48■■□□□ 1.51
PTPN18-208ENST00000462996 SPICE1Q8N0Z3 855 aa24.48■■□□□ 1.51
PTPN18-208ENST00000462996 PPM1EQ8WY54 764 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms