RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 U2AF1L5P0DN76 240 aaPredicted RBP3.99□□□□□ -1.77
SMC4-203ENST00000462668 IGFALSP35858 605 aa3.99□□□□□ -1.77
SMC4-203ENST00000462668 GRIA2P42262 883 aa3.99□□□□□ -1.77
SMC4-203ENST00000462668 ERVK-24P63145 666 aa3.99□□□□□ -1.77
SMC4-203ENST00000462668 U2AF1Q01081 240 aaKnown RBP eCLIP3.99□□□□□ -1.77
SMC4-203ENST00000462668 STYK1Q6J9G0 422 aa3.99□□□□□ -1.77
SMC4-203ENST00000462668 CHST15Q7LFX5 561 aaPredicted RBP3.99□□□□□ -1.77
SMC4-203ENST00000462668 MAMDC2Q7Z304 686 aaPredicted RBP3.99□□□□□ -1.77
SMC4-203ENST00000462668 FGD2Q7Z6J4 655 aa3.99□□□□□ -1.77
SMC4-203ENST00000462668 TJP2Q9UDY2 1190 aa3.99□□□□□ -1.77
SMC4-203ENST00000462668 CNGA1P29973 690 aa3.99□□□□□ -1.77
SMC4-203ENST00000462668 DSG1Q02413 1049 aa3.99□□□□□ -1.77
SMC4-203ENST00000462668 EFHC2Q5JST6 749 aa3.99□□□□□ -1.77
SMC4-203ENST00000462668 PJA1Q8NG27 643 aa3.99□□□□□ -1.77
SMC4-203ENST00000462668 WDR66Q8TBY9 1149 aa3.99□□□□□ -1.77
SMC4-203ENST00000462668 CAPN5O15484 640 aaPredicted RBP3.98□□□□□ -1.77
SMC4-203ENST00000462668 TBX1O43435 398 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 PLIN1O60240 522 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 SMNDC1O75940 238 aaKnown RBP eCLIP3.98□□□□□ -1.77
SMC4-203ENST00000462668 NAT2P11245 290 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 CPEP16870 476 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 RHOQP17081 205 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 PTPRAP18433 802 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 GRB10Q13322 594 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 PPP2R5EQ16537 467 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.98□□□□□ -1.775e-8■■■■■ 30.5
SMC4-203ENST00000462668 DIEXFQ68CQ4 756 aaKnown RBP3.98□□□□□ -1.77
SMC4-203ENST00000462668 CYP4X1Q8N118 509 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 DNAJB12Q9NXW2 375 aaKnown RBP3.98□□□□□ -1.77
SMC4-203ENST00000462668 TRAF5O00463 557 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 GFRA1P56159 465 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 CNTD1Q8N815 330 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 NSUN5Q96P11 429 aaKnown RBP3.98□□□□□ -1.77
SMC4-203ENST00000462668 NUCKS1Q9H1E3 243 aaKnown RBP3.98□□□□□ -1.77
SMC4-203ENST00000462668 APEX2Q9UBZ4 518 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 TRHDEQ9UKU6 1024 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 PCDHB10Q9UN67 800 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 SLC6A14Q9UN76 642 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 C2CD2LO14523 706 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 PRKD3O94806 890 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 EPHA1P21709 976 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 GJA9P57773 515 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 FAPQ12884 760 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 GTF2H3Q13889 308 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 HSP90AB4PQ58FF6 505 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 FAM83BQ5T0W9 1011 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 WWC2Q6AWC2 1192 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 HDXQ7Z353 690 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 ORAI2Q96SN7 254 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 SFMBT1Q9UHJ3 866 aa3.98□□□□□ -1.77
SMC4-203ENST00000462668 CHURC1-FNTBB4DL54 471 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 ARVCFO00192 962 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 NEMP1O14524 444 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 ECEL1O95672 775 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 WIPI1Q5MNZ9 446 aaPredicted RBP3.97□□□□□ -1.77
SMC4-203ENST00000462668 ZBTB37Q5TC79 503 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 SLC6A19Q695T7 634 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 CMTR2Q8IYT2 770 aaKnown RBP3.97□□□□□ -1.77
SMC4-203ENST00000462668 IFT22Q9H7X7 185 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 TAGLN3Q9UI15 199 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 C9IYK1 514 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 PIP4K2BP78356 416 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 FBXW10Q5XX13 1052 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 BRAPQ7Z569 592 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 HAUS7Q99871 368 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 J3QW42 95 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 SERPINB3P29508 390 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 LSSP48449 732 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 CPA6Q8N4T0 437 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 UBR7Q8N806 425 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 PTPRN2Q92932 1015 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 GJA10Q969M2 543 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 CBX4O00257 560 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 MAFGO15525 162 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 CKMP06732 381 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 FGFR3P22607 806 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 ABHD17CQ6PCB6 329 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 BVESQ8NE79 360 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 ASAP3Q8TDY4 903 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 NANOS1Q8WY41 292 aaKnown RBP3.97□□□□□ -1.77
SMC4-203ENST00000462668 ZNF837Q96EG3 531 aaPredicted RBP3.97□□□□□ -1.77
SMC4-203ENST00000462668 WDR89Q96FK6 387 aaPredicted RBP3.97□□□□□ -1.77
SMC4-203ENST00000462668 YIPF4Q9BSR8 244 aa3.97□□□□□ -1.77
SMC4-203ENST00000462668 CCDC8Q9H0W5 538 aaPredicted RBP3.97□□□□□ -1.77
SMC4-203ENST00000462668 RBP3P10745 1247 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 MAPRE1Q15691 268 aaKnown RBP3.96□□□□□ -1.78
SMC4-203ENST00000462668 AXDND1Q5T1B0 1012 aaPredicted RBP3.96□□□□□ -1.78
SMC4-203ENST00000462668 MAP1SQ66K74 1059 aaPredicted RBP3.96□□□□□ -1.78
SMC4-203ENST00000462668 EPM2AIP1Q7L775 607 aaPredicted RBP3.96□□□□□ -1.78
SMC4-203ENST00000462668 OTOP1Q7RTM1 612 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 KREMEN2Q8NCW0 462 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 SMC1BQ8NDV3 1235 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 DDX54Q8TDD1 881 aaKnown RBP3.96□□□□□ -1.78
SMC4-203ENST00000462668 ZNF526Q8TF50 670 aaPredicted RBP3.96□□□□□ -1.78
SMC4-203ENST00000462668 BHMTQ93088 406 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 KIFC2Q96AC6 838 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 CCDC140Q96MF4 163 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 UPP2O95045 317 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 BMP2P12643 396 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 CD33P20138 364 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms