RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 TANGO6Q9C0B7 1094 aa22.5■■□□□ 1.19
SLC6A1-204ENST00000462473 VCPKMTQ9H867 229 aa22.5■■□□□ 1.19
SLC6A1-204ENST00000462473 BIN2Q9UBW5 565 aaPredicted RBP22.5■■□□□ 1.19
SLC6A1-204ENST00000462473 ADCY3O60266 1144 aa22.49■■□□□ 1.19
SLC6A1-204ENST00000462473 SDSP20132 328 aa22.49■■□□□ 1.19
SLC6A1-204ENST00000462473 SPICE1Q8N0Z3 855 aa22.49■■□□□ 1.19
SLC6A1-204ENST00000462473 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.49■■□□□ 1.19
SLC6A1-204ENST00000462473 RABGAP1Q9Y3P9 1069 aa22.49■■□□□ 1.19
SLC6A1-204ENST00000462473 MGAMO43451 1857 aa22.48■■□□□ 1.19
SLC6A1-204ENST00000462473 POTEFA5A3E0 1075 aa22.48■■□□□ 1.19
SLC6A1-204ENST00000462473 FOXP2O15409 715 aa22.48■■□□□ 1.19
SLC6A1-204ENST00000462473 RAD21O60216 631 aa22.48■■□□□ 1.19
SLC6A1-204ENST00000462473 COG2Q14746 738 aa22.48■■□□□ 1.19
SLC6A1-204ENST00000462473 KIAA1755Q5JYT7 1200 aa22.48■■□□□ 1.19
SLC6A1-204ENST00000462473 SLAIN1Q8ND83 568 aa22.48■■□□□ 1.19
SLC6A1-204ENST00000462473 GOPCQ9HD26 462 aa22.48■■□□□ 1.19
SLC6A1-204ENST00000462473 HOXC10Q9NYD6 342 aa22.48■■□□□ 1.19
SLC6A1-204ENST00000462473 SPDYE16A6NNV3 312 aaPredicted RBP22.47■■□□□ 1.19
SLC6A1-204ENST00000462473 PDE4AP27815 886 aa22.47■■□□□ 1.19
SLC6A1-204ENST00000462473 MAPK4P31152 587 aa22.47■■□□□ 1.19
SLC6A1-204ENST00000462473 UBXN2AP68543 259 aa22.47■■□□□ 1.19
SLC6A1-204ENST00000462473 IRF5Q13568 498 aa22.47■■□□□ 1.19
SLC6A1-204ENST00000462473 POTEEQ6S8J3 1075 aa22.47■■□□□ 1.19
SLC6A1-204ENST00000462473 LBX2Q6XYB7 198 aa22.47■■□□□ 1.19
SLC6A1-204ENST00000462473 WDR46O15213 610 aaKnown RBP22.46■■□□□ 1.19
SLC6A1-204ENST00000462473 CNMDO75829 334 aa22.46■■□□□ 1.19
SLC6A1-204ENST00000462473 TSPY3P0CV98 308 aa22.46■■□□□ 1.19
SLC6A1-204ENST00000462473 TSPY8P0CW00 308 aa22.46■■□□□ 1.19
SLC6A1-204ENST00000462473 CCNA1P78396 465 aa22.46■■□□□ 1.19
SLC6A1-204ENST00000462473 CTDSPL2Q05D32 466 aa22.46■■□□□ 1.19
SLC6A1-204ENST00000462473 ALX1Q15699 326 aa22.46■■□□□ 1.19
SLC6A1-204ENST00000462473 ZNF589Q86UQ0 364 aaPredicted RBP22.46■■□□□ 1.19
SLC6A1-204ENST00000462473 PXYLP1Q8TE99 480 aa22.46■■□□□ 1.19
SLC6A1-204ENST00000462473 CWC22Q9HCG8 908 aaKnown RBP22.46■■□□□ 1.19
SLC6A1-204ENST00000462473 DIAPH3Q9NSV4 1193 aa22.46■■□□□ 1.19
SLC6A1-204ENST00000462473 NYAP2Q9P242 653 aa22.46■■□□□ 1.19
SLC6A1-204ENST00000462473 HIP1O00291 1037 aa22.45■■□□□ 1.18
SLC6A1-204ENST00000462473 FLOT1O75955 427 aa22.45■■□□□ 1.18
SLC6A1-204ENST00000462473 HSPD1P10809 573 aaKnown RBP22.45■■□□□ 1.18
SLC6A1-204ENST00000462473 MFAP1P55081 439 aaKnown RBP22.45■■□□□ 1.18
SLC6A1-204ENST00000462473 MTFR1Q15390 333 aa22.45■■□□□ 1.18
SLC6A1-204ENST00000462473 PORCNQ9H237 461 aa22.45■■□□□ 1.18
SLC6A1-204ENST00000462473 GJD2Q9UKL4 321 aa22.45■■□□□ 1.18
SLC6A1-204ENST00000462473 CCDC171Q6TFL3 1326 aa22.45■■□□□ 1.18
SLC6A1-204ENST00000462473 FGAP02671 866 aa22.44■■□□□ 1.18
SLC6A1-204ENST00000462473 ELNP15502 786 aa22.44■■□□□ 1.18
SLC6A1-204ENST00000462473 DSG3P32926 999 aa22.44■■□□□ 1.18
SLC6A1-204ENST00000462473 TFAP4Q01664 338 aa22.44■■□□□ 1.18
SLC6A1-204ENST00000462473 FAM47AQ5JRC9 791 aa22.44■■□□□ 1.18
SLC6A1-204ENST00000462473 SAMD1Q6SPF0 538 aaPredicted RBP22.44■■□□□ 1.18
SLC6A1-204ENST00000462473 CWC27Q6UX04 472 aaKnown RBP22.44■■□□□ 1.18
SLC6A1-204ENST00000462473 NUDT12Q9BQG2 462 aa22.44■■□□□ 1.18
SLC6A1-204ENST00000462473 BTBD7Q9P203 1132 aa22.44■■□□□ 1.18
SLC6A1-204ENST00000462473 CLIP2Q9UDT6 1046 aa22.44■■□□□ 1.18
SLC6A1-204ENST00000462473 IGKV6D-41A0A0C4DH26 115 aa22.43■■□□□ 1.18
SLC6A1-204ENST00000462473 EN2P19622 333 aaPredicted RBP22.43■■□□□ 1.18
SLC6A1-204ENST00000462473 WDR78Q5VTH9 848 aa22.43■■□□□ 1.18
SLC6A1-204ENST00000462473 GPR142Q7Z601 462 aa22.43■■□□□ 1.18
SLC6A1-204ENST00000462473 PLEKHH3Q7Z736 793 aa22.43■■□□□ 1.18
SLC6A1-204ENST00000462473 NEDD1Q8NHV4 660 aa22.43■■□□□ 1.18
SLC6A1-204ENST00000462473 CEP95Q96GE4 821 aa22.43■■□□□ 1.18
SLC6A1-204ENST00000462473 ANAPC4Q9UJX5 808 aa22.43■■□□□ 1.18
SLC6A1-204ENST00000462473 CYP2B6P20813 491 aa22.42■■□□□ 1.18
SLC6A1-204ENST00000462473 TTC22Q5TAA0 569 aa22.42■■□□□ 1.18
SLC6A1-204ENST00000462473 SOCS4Q8WXH5 440 aa22.42■■□□□ 1.18
SLC6A1-204ENST00000462473 INCENPQ9NQS7 918 aa22.42■■□□□ 1.18
SLC6A1-204ENST00000462473 MTMR4Q9NYA4 1195 aa22.42■■□□□ 1.18
SLC6A1-204ENST00000462473 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.42■■□□□ 1.18
SLC6A1-204ENST00000462473 TSPY2A6NKD2 308 aa22.41■■□□□ 1.18
SLC6A1-204ENST00000462473 F5H6K3 240 aa22.41■■□□□ 1.18
SLC6A1-204ENST00000462473 TTLL1O95922 423 aa22.41■■□□□ 1.18
SLC6A1-204ENST00000462473 CCL5P13501 91 aa22.41■■□□□ 1.18
SLC6A1-204ENST00000462473 KLRC3Q07444 240 aa22.41■■□□□ 1.18
SLC6A1-204ENST00000462473 FAM83BQ5T0W9 1011 aa22.41■■□□□ 1.18
SLC6A1-204ENST00000462473 MB21D1Q8N884 522 aa22.41■■□□□ 1.18
SLC6A1-204ENST00000462473 MKL1Q969V6 931 aa22.41■■□□□ 1.18
SLC6A1-204ENST00000462473 RNF208Q9H0X6 261 aa22.41■■□□□ 1.18
SLC6A1-204ENST00000462473 DOCK3Q8IZD9 2030 aa22.4■■□□□ 1.18
SLC6A1-204ENST00000462473 RANBP6O60518 1105 aaKnown RBP22.4■■□□□ 1.18
SLC6A1-204ENST00000462473 INHAP05111 366 aa22.4■■□□□ 1.18
SLC6A1-204ENST00000462473 ATG4CQ96DT6 458 aa22.4■■□□□ 1.18
SLC6A1-204ENST00000462473 TOMM22Q9NS69 142 aa22.4■■□□□ 1.18
SLC6A1-204ENST00000462473 PLIN4Q96Q06 1357 aa22.39■■□□□ 1.18
SLC6A1-204ENST00000462473 GREB1LQ9C091 1923 aaPredicted RBP22.39■■□□□ 1.18
SLC6A1-204ENST00000462473 ZMYM6O95789 1325 aa22.39■■□□□ 1.18
SLC6A1-204ENST00000462473 GSPT1P15170 499 aaKnown RBP22.39■■□□□ 1.17
SLC6A1-204ENST00000462473 PLS1Q14651 629 aa22.39■■□□□ 1.17
SLC6A1-204ENST00000462473 PPP4R3BQ5MIZ7 849 aa22.39■■□□□ 1.17
SLC6A1-204ENST00000462473 SPATC1LQ9H0A9 340 aa22.39■■□□□ 1.17
SLC6A1-204ENST00000462473 IVNS1ABPQ9Y6Y0 642 aa22.39■■□□□ 1.17
SLC6A1-204ENST00000462473 NDUFB10O96000 172 aa22.38■■□□□ 1.17
SLC6A1-204ENST00000462473 RGS2P41220 211 aa22.38■■□□□ 1.17
SLC6A1-204ENST00000462473 HAND2P61296 217 aa22.38■■□□□ 1.17
SLC6A1-204ENST00000462473 MORN1Q5T089 497 aa22.38■■□□□ 1.17
SLC6A1-204ENST00000462473 NKX2-3Q8TAU0 364 aa22.38■■□□□ 1.17
SLC6A1-204ENST00000462473 NUP88Q99567 741 aaPredicted RBP22.38■■□□□ 1.17
SLC6A1-204ENST00000462473 MOV10L1Q9BXT6 1211 aaKnown RBP22.38■■□□□ 1.17
SLC6A1-204ENST00000462473 UNC93B1Q9H1C4 597 aa22.38■■□□□ 1.17
SLC6A1-204ENST00000462473 FBXO28Q9NVF7 368 aa22.38■■□□□ 1.17
SLC6A1-204ENST00000462473 SYNPO2Q9UMS6 1093 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms