RNA–Protein interactions for RNA: ENST00000462400.1

TNRC6A-204, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 2,550 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-204ENST00000462400 ARPP21Q9UBL0 812 aaPredicted RBP13.73□□□□□ -0.21
TNRC6A-204ENST00000462400 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.73□□□□□ -0.21
TNRC6A-204ENST00000462400 GPR75-ASB3A0A0A6YYF3 556 aa13.72□□□□□ -0.21
TNRC6A-204ENST00000462400 SMC2O95347 1197 aa13.72□□□□□ -0.21
TNRC6A-204ENST00000462400 RHBDL3P58872 404 aa13.72□□□□□ -0.21
TNRC6A-204ENST00000462400 TMC6Q7Z403 805 aa13.72□□□□□ -0.21
TNRC6A-204ENST00000462400 ZNF654Q8IZM8 581 aa13.72□□□□□ -0.21
TNRC6A-204ENST00000462400 TBC1D22AQ8WUA7 517 aa13.72□□□□□ -0.21
TNRC6A-204ENST00000462400 ZSCAN16Q9H4T2 348 aaPredicted RBP13.72□□□□□ -0.21
TNRC6A-204ENST00000462400 BCCIPQ9P287 314 aaKnown RBP eCLIP13.72□□□□□ -0.21
TNRC6A-204ENST00000462400 SCN9AQ15858 1988 aa13.72□□□□□ -0.21
TNRC6A-204ENST00000462400 NAV1Q8NEY1 1877 aa13.72□□□□□ -0.21
TNRC6A-204ENST00000462400 DHX16O60231 1041 aaKnown RBP13.72□□□□□ -0.21
TNRC6A-204ENST00000462400 SEC31AO94979 1220 aaKnown RBP13.72□□□□□ -0.21
TNRC6A-204ENST00000462400 ZRANB2O95218 330 aaKnown RBP eCLIP13.72□□□□□ -0.21
TNRC6A-204ENST00000462400 POLR3DP05423 398 aaPredicted RBP13.72□□□□□ -0.21
TNRC6A-204ENST00000462400 PPP4CP60510 307 aa13.72□□□□□ -0.21
TNRC6A-204ENST00000462400 TPM4P67936 248 aa13.72□□□□□ -0.21
TNRC6A-204ENST00000462400 NTRK3Q16288 839 aa13.72□□□□□ -0.21
TNRC6A-204ENST00000462400 C12orf60Q5U649 245 aa13.72□□□□□ -0.21
TNRC6A-204ENST00000462400 ARMCX5Q6P1M9 558 aa13.72□□□□□ -0.21
TNRC6A-204ENST00000462400 KIAA0825Q8IV33 1275 aa13.72□□□□□ -0.21
TNRC6A-204ENST00000462400 CNKSR1Q969H4 720 aa13.72□□□□□ -0.21
TNRC6A-204ENST00000462400 C8orf76Q96K31 380 aa13.72□□□□□ -0.21
TNRC6A-204ENST00000462400 SLC26A6Q9BXS9 759 aa13.72□□□□□ -0.21
TNRC6A-204ENST00000462400 hCG_1642624A0A1W2PR95 340 aa13.71□□□□□ -0.21
TNRC6A-204ENST00000462400 PSDA5PKW4 1024 aaPredicted RBP13.71□□□□□ -0.21
TNRC6A-204ENST00000462400 ECE2O60344 883 aa13.71□□□□□ -0.21
TNRC6A-204ENST00000462400 SLURP2P0DP57 97 aa13.71□□□□□ -0.21
TNRC6A-204ENST00000462400 DPEP1P16444 411 aa13.71□□□□□ -0.21
TNRC6A-204ENST00000462400 SFPQP23246 707 aaKnown RBP eCLIP13.71□□□□□ -0.21
TNRC6A-204ENST00000462400 GUCY1A2P33402 732 aa13.71□□□□□ -0.21
TNRC6A-204ENST00000462400 SYNE3Q6ZMZ3 975 aa13.71□□□□□ -0.21
TNRC6A-204ENST00000462400 C7orf43Q8WVR3 580 aa13.71□□□□□ -0.21
TNRC6A-204ENST00000462400 EYA3Q99504 573 aa13.71□□□□□ -0.21
TNRC6A-204ENST00000462400 NAT10Q9H0A0 1025 aaKnown RBP13.71□□□□□ -0.21
TNRC6A-204ENST00000462400 IMPACTQ9P2X3 320 aa13.71□□□□□ -0.21
TNRC6A-204ENST00000462400 DNAI1Q9UI46 699 aa13.71□□□□□ -0.21
TNRC6A-204ENST00000462400 MTMR7Q9Y216 660 aa13.71□□□□□ -0.21
TNRC6A-204ENST00000462400 QSER1Q2KHR3 1735 aa13.71□□□□□ -0.21
TNRC6A-204ENST00000462400 TSPY2A6NKD2 308 aa13.71□□□□□ -0.22
TNRC6A-204ENST00000462400 RTN1Q16799 776 aa13.71□□□□□ -0.22
TNRC6A-204ENST00000462400 SBK1Q52WX2 424 aa13.71□□□□□ -0.22
TNRC6A-204ENST00000462400 IFIT1BQ5T764 474 aaKnown RBP13.71□□□□□ -0.22
TNRC6A-204ENST00000462400 ILDR1Q86SU0 546 aaPredicted RBP13.71□□□□□ -0.22
TNRC6A-204ENST00000462400 XPO4Q9C0E2 1151 aaKnown RBP13.71□□□□□ -0.22
TNRC6A-204ENST00000462400 PPP1R1BQ9UD71 204 aaPredicted RBP13.71□□□□□ -0.22
TNRC6A-204ENST00000462400 ECM29Q5VYK3 1845 aa13.71□□□□□ -0.22
TNRC6A-204ENST00000462400 FLT1P17948 1338 aa13.7□□□□□ -0.22
TNRC6A-204ENST00000462400 USP17L3A6NCW0 530 aa13.7□□□□□ -0.22
TNRC6A-204ENST00000462400 USP17L4A6NCW7 530 aa13.7□□□□□ -0.22
TNRC6A-204ENST00000462400 KRBA2Q6ZNG9 492 aa13.7□□□□□ -0.22
TNRC6A-204ENST00000462400 USP17L1Q7RTZ2 530 aa13.7□□□□□ -0.22
TNRC6A-204ENST00000462400 TXLNBQ8N3L3 684 aa13.7□□□□□ -0.22
TNRC6A-204ENST00000462400 CCDC150Q8NCX0 1101 aa13.7□□□□□ -0.22
TNRC6A-204ENST00000462400 MNS1Q8NEH6 495 aa13.7□□□□□ -0.22
TNRC6A-204ENST00000462400 ALG1Q9BT22 464 aa13.7□□□□□ -0.22
TNRC6A-204ENST00000462400 IFNKQ9P0W0 207 aa13.7□□□□□ -0.22
TNRC6A-204ENST00000462400 KIF28PB7ZC32 967 aa13.7□□□□□ -0.22
TNRC6A-204ENST00000462400 FGRP09769 529 aa13.7□□□□□ -0.22
TNRC6A-204ENST00000462400 IARSP41252 1262 aaKnown RBP13.7□□□□□ -0.22
TNRC6A-204ENST00000462400 CACNB3P54284 484 aa13.7□□□□□ -0.22
TNRC6A-204ENST00000462400 TFAP4Q01664 338 aa13.7□□□□□ -0.22
TNRC6A-204ENST00000462400 FAM160A1Q05DH4 1040 aa13.7□□□□□ -0.22
TNRC6A-204ENST00000462400 PDE4BQ07343 736 aa13.7□□□□□ -0.22
TNRC6A-204ENST00000462400 IQCA1Q86XH1 822 aa13.7□□□□□ -0.22
TNRC6A-204ENST00000462400 FSIP1Q8NA03 581 aa13.7□□□□□ -0.22
TNRC6A-204ENST00000462400 SMARCE1Q969G3 411 aa13.7□□□□□ -0.22
TNRC6A-204ENST00000462400 ZCCHC17Q9NP64 241 aaKnown RBP13.7□□□□□ -0.22
TNRC6A-204ENST00000462400 RCOR1Q9UKL0 485 aa13.7□□□□□ -0.22
TNRC6A-204ENST00000462400 BAZ2BQ9UIF8 2168 aaKnown RBP13.69□□□□□ -0.22
TNRC6A-204ENST00000462400 GAKO14976 1311 aa13.69□□□□□ -0.22
TNRC6A-204ENST00000462400 NRDCO43847 1150 aa13.69□□□□□ -0.22
TNRC6A-204ENST00000462400 USP28Q96RU2 1077 aa13.69□□□□□ -0.22
TNRC6A-204ENST00000462400 MKNK2Q9HBH9 465 aa13.69□□□□□ -0.22
TNRC6A-204ENST00000462400 DDX4Q9NQI0 724 aaKnown RBP13.69□□□□□ -0.22
TNRC6A-204ENST00000462400 SLC3A2P08195 630 aaKnown RBP13.69□□□□□ -0.22
TNRC6A-204ENST00000462400 ME1P48163 572 aa13.69□□□□□ -0.22
TNRC6A-204ENST00000462400 ETF1P62495 437 aaKnown RBP13.69□□□□□ -0.22
TNRC6A-204ENST00000462400 FANCBQ8NB91 859 aa13.69□□□□□ -0.22
TNRC6A-204ENST00000462400 C10orf71Q711Q0 1435 aa13.69□□□□□ -0.22
TNRC6A-204ENST00000462400 PPIP5K2O43314 1243 aa13.68□□□□□ -0.22
TNRC6A-204ENST00000462400 ORC4O43929 436 aa13.68□□□□□ -0.22
TNRC6A-204ENST00000462400 URI1O94763 535 aaPredicted RBP13.68□□□□□ -0.22
TNRC6A-204ENST00000462400 PLEKHA8P1O95397 391 aa13.68□□□□□ -0.22
TNRC6A-204ENST00000462400 KCNA3P22001 575 aa13.68□□□□□ -0.22
TNRC6A-204ENST00000462400 ENGASEQ8NFI3 743 aa13.68□□□□□ -0.22
TNRC6A-204ENST00000462400 FBXO18Q8NFZ0 1043 aa13.68□□□□□ -0.22
TNRC6A-204ENST00000462400 SDF4Q9BRK5 362 aa13.68□□□□□ -0.22
TNRC6A-204ENST00000462400 MYH1P12882 1939 aa13.68□□□□□ -0.22
TNRC6A-204ENST00000462400 OAS2P29728 719 aaKnown RBP13.68□□□□□ -0.22
TNRC6A-204ENST00000462400 ZRSR1Q15695 479 aaKnown RBP13.68□□□□□ -0.22
TNRC6A-204ENST00000462400 CPLX2Q6PUV4 134 aaKnown RBP13.68□□□□□ -0.22
TNRC6A-204ENST00000462400 RASGRP2Q7LDG7 609 aa13.68□□□□□ -0.22
TNRC6A-204ENST00000462400 TTLL6Q8N841 843 aa13.68□□□□□ -0.22
TNRC6A-204ENST00000462400 EPC1Q9H2F5 836 aa13.68□□□□□ -0.22
TNRC6A-204ENST00000462400 IL17RBQ9NRM6 502 aa13.68□□□□□ -0.22
TNRC6A-204ENST00000462400 USP40Q9NVE5 1235 aa13.68□□□□□ -0.22
TNRC6A-204ENST00000462400 MYH15Q9Y2K3 1946 aa13.67□□□□□ -0.22
TNRC6A-204ENST00000462400 TNNT3P45378 269 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms