RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 NACC1Q96RE7 527 aa7.28□□□□□ -1.24
VPS36-202ENST00000462289 CWC25Q9NXE8 425 aaPredicted RBP7.28□□□□□ -1.24
VPS36-202ENST00000462289 PPP1R1BQ9UD71 204 aaPredicted RBP7.28□□□□□ -1.24
VPS36-202ENST00000462289 TIAM2Q8IVF5 1701 aa7.27□□□□□ -1.25
VPS36-202ENST00000462289 A0A0G2JLW4 131 aa7.27□□□□□ -1.25
VPS36-202ENST00000462289 LILRB5O75023 590 aa7.27□□□□□ -1.25
VPS36-202ENST00000462289 BCAR3O75815 825 aa7.27□□□□□ -1.25
VPS36-202ENST00000462289 TRIM27P14373 513 aa7.27□□□□□ -1.25
VPS36-202ENST00000462289 CHRNA5P30532 468 aa7.27□□□□□ -1.25
VPS36-202ENST00000462289 ATF7IPQ6VMQ6 1270 aa7.27□□□□□ -1.25
VPS36-202ENST00000462289 FAM89AQ96GI7 184 aa7.27□□□□□ -1.25
VPS36-202ENST00000462289 MYD88Q99836 296 aa7.27□□□□□ -1.25
VPS36-202ENST00000462289 HINFPQ9BQA5 517 aa7.27□□□□□ -1.25
VPS36-202ENST00000462289 USP44Q9H0E7 712 aa7.27□□□□□ -1.25
VPS36-202ENST00000462289 VRTNQ9H8Y1 702 aa7.27□□□□□ -1.25
VPS36-202ENST00000462289 SMC4Q9NTJ3 1288 aa7.27□□□□□ -1.25
VPS36-202ENST00000462289 PIM2Q9P1W9 311 aa7.27□□□□□ -1.25
VPS36-202ENST00000462289 SLC6A14Q9UN76 642 aa7.27□□□□□ -1.25
VPS36-202ENST00000462289 H0YIN7 160 aa7.26□□□□□ -1.25
VPS36-202ENST00000462289 FAM229AH3BQW9 127 aa7.26□□□□□ -1.25
VPS36-202ENST00000462289 GRM8O00222 908 aa7.26□□□□□ -1.25
VPS36-202ENST00000462289 PDE8AO60658 829 aa7.26□□□□□ -1.25
VPS36-202ENST00000462289 GRNP28799 593 aaKnown RBP7.26□□□□□ -1.25
VPS36-202ENST00000462289 WEE1P30291 646 aa7.26□□□□□ -1.25
VPS36-202ENST00000462289 FOXO4P98177 505 aa7.26□□□□□ -1.25
VPS36-202ENST00000462289 NEXNQ0ZGT2 675 aa7.26□□□□□ -1.25
VPS36-202ENST00000462289 RSPO4Q2I0M5 234 aaPredicted RBP7.26□□□□□ -1.25
VPS36-202ENST00000462289 NKAPLQ5M9Q1 402 aa7.26□□□□□ -1.25
VPS36-202ENST00000462289 C2CD5Q86YS7 1000 aa7.26□□□□□ -1.25
VPS36-202ENST00000462289 Q8N3U1 123 aa7.26□□□□□ -1.25
VPS36-202ENST00000462289 TTLL6Q8N841 843 aa7.26□□□□□ -1.25
VPS36-202ENST00000462289 TTLL11Q8NHH1 800 aa7.26□□□□□ -1.25
VPS36-202ENST00000462289 BCL2L13Q9BXK5 485 aa7.26□□□□□ -1.25
VPS36-202ENST00000462289 API5Q9BZZ5 524 aaKnown RBP7.26□□□□□ -1.25
VPS36-202ENST00000462289 UBE2OQ9C0C9 1292 aaKnown RBP7.26□□□□□ -1.25
VPS36-202ENST00000462289 SRCIN1Q9C0H9 1055 aa7.26□□□□□ -1.25
VPS36-202ENST00000462289 C11orf16Q9NQ32 467 aa7.26□□□□□ -1.25
VPS36-202ENST00000462289 TRMT112Q9UI30 125 aaKnown RBP7.26□□□□□ -1.25
VPS36-202ENST00000462289 NOB1Q9ULX3 412 aaKnown RBP7.26□□□□□ -1.25
VPS36-202ENST00000462289 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.26□□□□□ -1.25
VPS36-202ENST00000462289 COL4A5P29400 1685 aa7.25□□□□□ -1.25
VPS36-202ENST00000462289 NFKBIEO00221 500 aa7.25□□□□□ -1.25
VPS36-202ENST00000462289 IRS4O14654 1257 aaPredicted RBP7.25□□□□□ -1.25
VPS36-202ENST00000462289 HCLS1P14317 486 aaPredicted RBP7.25□□□□□ -1.25
VPS36-202ENST00000462289 HSP90B1P14625 803 aaKnown RBP7.25□□□□□ -1.25
VPS36-202ENST00000462289 LMOD1P29536 600 aaPredicted RBP7.25□□□□□ -1.25
VPS36-202ENST00000462289 INPP5BP32019 993 aa7.25□□□□□ -1.25
VPS36-202ENST00000462289 CCT4P50991 539 aaKnown RBP7.25□□□□□ -1.25
VPS36-202ENST00000462289 PRELPP51888 382 aa7.25□□□□□ -1.25
VPS36-202ENST00000462289 MTX1Q13505 466 aa7.25□□□□□ -1.25
VPS36-202ENST00000462289 CCINQ13939 588 aa7.25□□□□□ -1.25
VPS36-202ENST00000462289 PRPF40BQ6NWY9 871 aaKnown RBP7.25□□□□□ -1.25
VPS36-202ENST00000462289 TMC4Q7Z404 712 aa7.25□□□□□ -1.25
VPS36-202ENST00000462289 RTFDC1Q9BY42 306 aaPredicted RBP7.25□□□□□ -1.25
VPS36-202ENST00000462289 TPSG1Q9NRR2 321 aa7.25□□□□□ -1.25
VPS36-202ENST00000462289 SCN9AQ15858 1988 aa7.25□□□□□ -1.25
VPS36-202ENST00000462289 ARAP2Q8WZ64 1704 aa7.24□□□□□ -1.25
VPS36-202ENST00000462289 A0A0A0MRY4 1105 aa7.24□□□□□ -1.25
VPS36-202ENST00000462289 IPO8O15397 1037 aaKnown RBP7.24□□□□□ -1.25
VPS36-202ENST00000462289 GRIN3BO60391 1043 aa7.24□□□□□ -1.25
VPS36-202ENST00000462289 BBOX1O75936 387 aa7.24□□□□□ -1.25
VPS36-202ENST00000462289 NBPF7P0C2Y1 421 aaPredicted RBP7.24□□□□□ -1.25
VPS36-202ENST00000462289 RLBP1P12271 317 aa7.24□□□□□ -1.25
VPS36-202ENST00000462289 EPB42P16452 691 aa7.24□□□□□ -1.25
VPS36-202ENST00000462289 ALDH1B1P30837 517 aa7.24□□□□□ -1.25
VPS36-202ENST00000462289 CTSWP56202 376 aa7.24□□□□□ -1.25
VPS36-202ENST00000462289 GRAPQ13588 217 aa7.24□□□□□ -1.25
VPS36-202ENST00000462289 GRIK4Q16099 956 aa7.24□□□□□ -1.25
VPS36-202ENST00000462289 DALRD3Q5D0E6 543 aaKnown RBP7.24□□□□□ -1.25
VPS36-202ENST00000462289 EPHA10Q5JZY3 1008 aa7.24□□□□□ -1.25
VPS36-202ENST00000462289 UBE3BQ7Z3V4 1068 aa7.24□□□□□ -1.25
VPS36-202ENST00000462289 ANKRD44Q8N8A2 993 aa7.24□□□□□ -1.25
VPS36-202ENST00000462289 GRAPLQ8TC17 118 aaPredicted RBP7.24□□□□□ -1.25
VPS36-202ENST00000462289 MYO19Q96H55 970 aa7.24□□□□□ -1.25
VPS36-202ENST00000462289 SEMA6BQ9H3T3 888 aa7.24□□□□□ -1.25
VPS36-202ENST00000462289 DNAJB12Q9NXW2 375 aaKnown RBP7.24□□□□□ -1.25
VPS36-202ENST00000462289 NAGPAQ9UK23 515 aa7.24□□□□□ -1.25
VPS36-202ENST00000462289 RCAN3Q9UKA8 241 aa7.24□□□□□ -1.25
VPS36-202ENST00000462289 ZNF609O15014 1411 aa7.24□□□□□ -1.25
VPS36-202ENST00000462289 IRS2Q9Y4H2 1338 aa7.24□□□□□ -1.25
VPS36-202ENST00000462289 LGR5O75473 907 aa7.23□□□□□ -1.25
VPS36-202ENST00000462289 MAP3K6O95382 1288 aa7.23□□□□□ -1.25
VPS36-202ENST00000462289 ELNP15502 786 aa7.23□□□□□ -1.25
VPS36-202ENST00000462289 AFF1P51825 1210 aaKnown RBP7.23□□□□□ -1.25
VPS36-202ENST00000462289 PDE3AQ14432 1141 aa7.23□□□□□ -1.25
VPS36-202ENST00000462289 SOGA3Q5TF21 947 aa7.23□□□□□ -1.25
VPS36-202ENST00000462289 ZKSCAN2Q63HK3 967 aa7.23□□□□□ -1.25
VPS36-202ENST00000462289 SP8Q8IXZ3 490 aa7.23□□□□□ -1.25
VPS36-202ENST00000462289 PNMA5Q96PV4 448 aa7.23□□□□□ -1.25
VPS36-202ENST00000462289 PSMD1Q99460 953 aa7.23□□□□□ -1.25
VPS36-202ENST00000462289 JPH1Q9HDC5 661 aaPredicted RBP7.23□□□□□ -1.25
VPS36-202ENST00000462289 PODXL2Q9NZ53 605 aa7.23□□□□□ -1.25
VPS36-202ENST00000462289 TNNQ9UQP3 1299 aa7.23□□□□□ -1.25
VPS36-202ENST00000462289 ATP6V0A2Q9Y487 856 aa7.23□□□□□ -1.25
VPS36-202ENST00000462289 WDR90Q96KV7 1748 aa7.23□□□□□ -1.25
VPS36-202ENST00000462289 C9orf172C9J069 976 aa7.22□□□□□ -1.25
VPS36-202ENST00000462289 SELPP16109 830 aa7.22□□□□□ -1.25
VPS36-202ENST00000462289 NFKB1P19838 968 aa7.22□□□□□ -1.25
VPS36-202ENST00000462289 RFX5P48382 616 aaPredicted RBP7.22□□□□□ -1.25
VPS36-202ENST00000462289 IDH3AP50213 366 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms