RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 SPON2Q9BUD6 331 aa7.14□□□□□ -1.27
COPS3-204ENST00000462236 LRRC3Q9BY71 257 aa7.14□□□□□ -1.27
COPS3-204ENST00000462236 TMPRSS13Q9BYE2 586 aa7.14□□□□□ -1.27
COPS3-204ENST00000462236 CCDC86Q9H6F5 360 aaKnown RBP7.14□□□□□ -1.27
COPS3-204ENST00000462236 PEAK1Q9H792 1746 aa7.14□□□□□ -1.27
COPS3-204ENST00000462236 PHRF1Q9P1Y6 1649 aaKnown RBP7.14□□□□□ -1.27
COPS3-204ENST00000462236 RRBP1Q9P2E9 1410 aaKnown RBP7.14□□□□□ -1.27
COPS3-204ENST00000462236 ADAMTS1Q9UHI8 967 aa7.14□□□□□ -1.27
COPS3-204ENST00000462236 PLEKHH1Q9ULM0 1364 aa7.14□□□□□ -1.27
COPS3-204ENST00000462236 TLR6Q9Y2C9 796 aa7.14□□□□□ -1.27
COPS3-204ENST00000462236 TACC3Q9Y6A5 838 aa7.14□□□□□ -1.27
COPS3-204ENST00000462236 PARP4Q9UKK3 1724 aaKnown RBP7.13□□□□□ -1.27
COPS3-204ENST00000462236 ARHGEF10O15013 1369 aa7.13□□□□□ -1.27
COPS3-204ENST00000462236 NINLQ9Y2I6 1382 aa7.13□□□□□ -1.27
COPS3-204ENST00000462236 SPATA31A5Q5VU36 1347 aa7.13□□□□□ -1.27
COPS3-204ENST00000462236 SPATA31A7Q8IWB4 1347 aa7.13□□□□□ -1.27
COPS3-204ENST00000462236 MINDY4BA8MYZ0 360 aa7.13□□□□□ -1.27
COPS3-204ENST00000462236 DDX3YO15523 660 aaKnown RBP7.13□□□□□ -1.27
COPS3-204ENST00000462236 GARTP22102 1010 aa7.13□□□□□ -1.27
COPS3-204ENST00000462236 COL8A1P27658 744 aa7.13□□□□□ -1.27
COPS3-204ENST00000462236 GJA8P48165 433 aa7.13□□□□□ -1.27
COPS3-204ENST00000462236 COL9A2Q14055 689 aaPredicted RBP7.13□□□□□ -1.27
COPS3-204ENST00000462236 PDE3AQ14432 1141 aa7.13□□□□□ -1.27
COPS3-204ENST00000462236 EZH2Q15910 746 aaKnown RBP7.13□□□□□ -1.27
COPS3-204ENST00000462236 SNAP47Q5SQN1 464 aa7.13□□□□□ -1.27
COPS3-204ENST00000462236 FBXL19Q6PCT2 694 aa7.13□□□□□ -1.27
COPS3-204ENST00000462236 FAM196AQ6ZSG2 479 aa7.13□□□□□ -1.27
COPS3-204ENST00000462236 WAPLQ7Z5K2 1190 aa7.13□□□□□ -1.27
COPS3-204ENST00000462236 SMG8Q8ND04 991 aaKnown RBP7.13□□□□□ -1.27
COPS3-204ENST00000462236 GRIN3AQ8TCU5 1115 aa7.13□□□□□ -1.27
COPS3-204ENST00000462236 RASGRP4Q8TDF6 673 aa7.13□□□□□ -1.27
COPS3-204ENST00000462236 ZNF296Q8WUU4 475 aaPredicted RBP7.13□□□□□ -1.27
COPS3-204ENST00000462236 GATAD2BQ8WXI9 593 aa7.13□□□□□ -1.27
COPS3-204ENST00000462236 GAL3ST3Q96A11 431 aa7.13□□□□□ -1.27
COPS3-204ENST00000462236 RUSC1Q9BVN2 902 aa7.13□□□□□ -1.27
COPS3-204ENST00000462236 CYP4F12Q9HCS2 524 aa7.13□□□□□ -1.27
COPS3-204ENST00000462236 PCDHGB7Q9Y5F8 929 aa7.13□□□□□ -1.27
COPS3-204ENST00000462236 KAT6BQ8WYB5 2073 aa7.13□□□□□ -1.27
COPS3-204ENST00000462236 F8W735 103 aaPredicted RBP7.12□□□□□ -1.27
COPS3-204ENST00000462236 FAM229AH3BQW9 127 aa7.12□□□□□ -1.27
COPS3-204ENST00000462236 SELPP16109 830 aa7.12□□□□□ -1.27
COPS3-204ENST00000462236 ANKRD34AQ69YU3 496 aa7.12□□□□□ -1.27
COPS3-204ENST00000462236 KIAA1211Q6ZU35 1233 aa7.12□□□□□ -1.27
COPS3-204ENST00000462236 ACAD11Q709F0 780 aa7.12□□□□□ -1.27
COPS3-204ENST00000462236 GOLM1Q8NBJ4 401 aa7.12□□□□□ -1.27
COPS3-204ENST00000462236 GPBAR1Q8TDU6 330 aa7.12□□□□□ -1.27
COPS3-204ENST00000462236 UBASH3BQ8TF42 649 aa7.12□□□□□ -1.27
COPS3-204ENST00000462236 SNCAIPQ9Y6H5 919 aa7.12□□□□□ -1.27
COPS3-204ENST00000462236 WNK3Q9BYP7 1800 aa7.12□□□□□ -1.27
COPS3-204ENST00000462236 PIK3C2GO75747 1445 aa7.11□□□□□ -1.27
COPS3-204ENST00000462236 SPATA31E1Q6ZUB1 1445 aa7.11□□□□□ -1.27
COPS3-204ENST00000462236 ADGRF5Q8IZF2 1346 aa7.11□□□□□ -1.27
COPS3-204ENST00000462236 COL24A1Q17RW2 1714 aa7.11□□□□□ -1.27
COPS3-204ENST00000462236 FAM221AA4D161 298 aa7.11□□□□□ -1.27
COPS3-204ENST00000462236 ZNF862O60290 1169 aa7.11□□□□□ -1.27
COPS3-204ENST00000462236 AOC2O75106 756 aa7.11□□□□□ -1.27
COPS3-204ENST00000462236 CILPO75339 1184 aa7.11□□□□□ -1.27
COPS3-204ENST00000462236 MPP2Q14168 576 aa7.11□□□□□ -1.27
COPS3-204ENST00000462236 NUTM2GQ5VZR2 741 aa7.11□□□□□ -1.27
COPS3-204ENST00000462236 Q6ZS46 218 aa7.11□□□□□ -1.27
COPS3-204ENST00000462236 VPS37DQ86XT2 251 aa7.11□□□□□ -1.27
COPS3-204ENST00000462236 GPRASP2Q96D09 838 aa7.11□□□□□ -1.27
COPS3-204ENST00000462236 ACSBG1Q96GR2 724 aa7.11□□□□□ -1.27
COPS3-204ENST00000462236 CEP41Q9BYV8 373 aa7.11□□□□□ -1.27
COPS3-204ENST00000462236 ACBD3Q9H3P7 528 aa7.11□□□□□ -1.27
COPS3-204ENST00000462236 AKTIPQ9H8T0 292 aa7.11□□□□□ -1.27
COPS3-204ENST00000462236 INPP5FQ9Y2H2 1132 aa7.11□□□□□ -1.27
COPS3-204ENST00000462236 PCDHB5Q9Y5E4 795 aa7.11□□□□□ -1.27
COPS3-204ENST00000462236 MYOM1P52179 1685 aa7.11□□□□□ -1.27
COPS3-204ENST00000462236 LMO7Q8WWI1 1683 aa7.11□□□□□ -1.27
COPS3-204ENST00000462236 GOLGB1Q14789 3259 aaKnown RBP7.11□□□□□ -1.27
COPS3-204ENST00000462236 YTHDC2Q9H6S0 1430 aaKnown RBP7.1□□□□□ -1.27
COPS3-204ENST00000462236 ITSN1Q15811 1721 aa7.1□□□□□ -1.27
COPS3-204ENST00000462236 WISP1O95388 367 aa7.1□□□□□ -1.27
COPS3-204ENST00000462236 ECEL1O95672 775 aa7.1□□□□□ -1.27
COPS3-204ENST00000462236 BPNT1O95861 308 aa7.1□□□□□ -1.27
COPS3-204ENST00000462236 DLGAP3O95886 979 aa7.1□□□□□ -1.27
COPS3-204ENST00000462236 CTSBP07858 339 aa7.1□□□□□ -1.27
COPS3-204ENST00000462236 RPL6Q02878 288 aaKnown RBP7.1□□□□□ -1.27
COPS3-204ENST00000462236 ADGRE1Q14246 886 aa7.1□□□□□ -1.27
COPS3-204ENST00000462236 GRIK4Q16099 956 aa7.1□□□□□ -1.27
COPS3-204ENST00000462236 HDXQ7Z353 690 aa7.1□□□□□ -1.27
COPS3-204ENST00000462236 TINF2Q9BSI4 451 aa7.1□□□□□ -1.27
COPS3-204ENST00000462236 WDR18Q9BV38 432 aa7.1□□□□□ -1.27
COPS3-204ENST00000462236 RAD18Q9NS91 495 aa7.1□□□□□ -1.27
COPS3-204ENST00000462236 NRKQ7Z2Y5 1582 aa7.1□□□□□ -1.27
COPS3-204ENST00000462236 DLC1Q96QB1 1528 aa7.1□□□□□ -1.27
COPS3-204ENST00000462236 ANKARQ7Z5J8 1434 aa7.1□□□□□ -1.27
COPS3-204ENST00000462236 F13A1P00488 732 aa7.09□□□□□ -1.27
COPS3-204ENST00000462236 ERVK-24P63145 666 aa7.09□□□□□ -1.27
COPS3-204ENST00000462236 FAM160A1Q05DH4 1040 aa7.09□□□□□ -1.27
COPS3-204ENST00000462236 PAK2Q13177 524 aa7.09□□□□□ -1.27
COPS3-204ENST00000462236 SEPT6Q14141 434 aa7.09□□□□□ -1.27
COPS3-204ENST00000462236 CWF19L2Q2TBE0 894 aaKnown RBP7.09□□□□□ -1.27
COPS3-204ENST00000462236 NAALADL2Q58DX5 795 aa7.09□□□□□ -1.27
COPS3-204ENST00000462236 ZC3H12AQ5D1E8 599 aaKnown RBP7.09□□□□□ -1.27
COPS3-204ENST00000462236 BNC2Q6ZN30 1099 aaPredicted RBP7.09□□□□□ -1.27
COPS3-204ENST00000462236 SLITRK4Q8IW52 837 aa7.09□□□□□ -1.27
COPS3-204ENST00000462236 EAF1Q96JC9 268 aaPredicted RBP7.09□□□□□ -1.27
COPS3-204ENST00000462236 SEC16BQ96JE7 1060 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms