RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 MB21D1Q8N884 522 aa10.6□□□□□ -0.71
LDB1-203ENST00000461873 ACER1Q8TDN7 264 aa10.6□□□□□ -0.71
LDB1-203ENST00000461873 DYNLL2Q96FJ2 89 aa10.6□□□□□ -0.71
LDB1-203ENST00000461873 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.6□□□□□ -0.71
LDB1-203ENST00000461873 KANSL2Q9H9L4 492 aa10.6□□□□□ -0.71
LDB1-203ENST00000461873 RBPJLQ9UBG7 517 aa10.6□□□□□ -0.71
LDB1-203ENST00000461873 ISY1Q9ULR0 285 aaKnown RBP10.6□□□□□ -0.71
LDB1-203ENST00000461873 BAZ2AQ9UIF9 1905 aaKnown RBP10.6□□□□□ -0.71
LDB1-203ENST00000461873 HTTP42858 3142 aa10.6□□□□□ -0.71
LDB1-203ENST00000461873 EVI5O60447 810 aa10.59□□□□□ -0.71
LDB1-203ENST00000461873 XRCC5P13010 732 aaKnown RBP10.59□□□□□ -0.71
LDB1-203ENST00000461873 MX1P20591 662 aa10.59□□□□□ -0.71
LDB1-203ENST00000461873 CNGA1P29973 690 aa10.59□□□□□ -0.71
LDB1-203ENST00000461873 GABPAQ06546 454 aa10.59□□□□□ -0.71
LDB1-203ENST00000461873 PDE4BQ07343 736 aa10.59□□□□□ -0.71
LDB1-203ENST00000461873 AAMPQ13685 434 aa10.59□□□□□ -0.71
LDB1-203ENST00000461873 GIMAP6Q6P9H5 292 aa10.59□□□□□ -0.71
LDB1-203ENST00000461873 C16orf86Q6ZW13 317 aa10.59□□□□□ -0.71
LDB1-203ENST00000461873 APBA2Q99767 749 aa10.59□□□□□ -0.71
LDB1-203ENST00000461873 PUS7LQ9H0K6 701 aaKnown RBP10.59□□□□□ -0.71
LDB1-203ENST00000461873 NAPBQ9H115 298 aa10.59□□□□□ -0.71
LDB1-203ENST00000461873 WDR46O15213 610 aaKnown RBP10.58□□□□□ -0.72
LDB1-203ENST00000461873 GPAA1O43292 621 aa10.58□□□□□ -0.72
LDB1-203ENST00000461873 PRKAR2AP13861 404 aaKnown RBP10.58□□□□□ -0.72
LDB1-203ENST00000461873 AKR1B1P15121 316 aa10.58□□□□□ -0.72
LDB1-203ENST00000461873 MAP2K5Q13163 448 aa10.58□□□□□ -0.72
LDB1-203ENST00000461873 Q3C1V9 767 aa10.58□□□□□ -0.72
LDB1-203ENST00000461873 SLFNL1Q499Z3 407 aa10.58□□□□□ -0.72
LDB1-203ENST00000461873 PPP4R3BQ5MIZ7 849 aa10.58□□□□□ -0.72
LDB1-203ENST00000461873 TSHZ3Q63HK5 1081 aa10.58□□□□□ -0.72
LDB1-203ENST00000461873 CTR9Q6PD62 1173 aa10.58□□□□□ -0.72
LDB1-203ENST00000461873 NCAPG2Q86XI2 1143 aa10.58□□□□□ -0.72
LDB1-203ENST00000461873 SPICE1Q8N0Z3 855 aa10.58□□□□□ -0.72
LDB1-203ENST00000461873 ANKLE1Q8NAG6 615 aa10.58□□□□□ -0.72
LDB1-203ENST00000461873 SLC44A5Q8NCS7 719 aa10.58□□□□□ -0.72
LDB1-203ENST00000461873 STRBPQ96SI9 672 aaKnown RBP10.58□□□□□ -0.72
LDB1-203ENST00000461873 CRBNQ96SW2 442 aa10.58□□□□□ -0.72
LDB1-203ENST00000461873 RWDD1Q9H446 243 aaPredicted RBP10.58□□□□□ -0.72
LDB1-203ENST00000461873 TXNRD2Q9NNW7 524 aa10.58□□□□□ -0.72
LDB1-203ENST00000461873 BRCA2P51587 3418 aa10.58□□□□□ -0.72
LDB1-203ENST00000461873 CYP2D7A0A087X1C5 515 aa10.57□□□□□ -0.72
LDB1-203ENST00000461873 SLC15A5A6NIM6 579 aa10.57□□□□□ -0.72
LDB1-203ENST00000461873 PATL2C9JE40 543 aaKnown RBP10.57□□□□□ -0.72
LDB1-203ENST00000461873 STRNO43815 780 aa10.57□□□□□ -0.72
LDB1-203ENST00000461873 TSPY3P0CV98 308 aa10.57□□□□□ -0.72
LDB1-203ENST00000461873 TSPY8P0CW00 308 aa10.57□□□□□ -0.72
LDB1-203ENST00000461873 EEF2P13639 858 aaKnown RBP10.57□□□□□ -0.72
LDB1-203ENST00000461873 PORCNQ9H237 461 aa10.57□□□□□ -0.72
LDB1-203ENST00000461873 MROH8Q9H579 483 aa10.57□□□□□ -0.72
LDB1-203ENST00000461873 VCPKMTQ9H867 229 aa10.57□□□□□ -0.72
LDB1-203ENST00000461873 PAK6Q9NQU5 681 aaPredicted RBP10.57□□□□□ -0.72
LDB1-203ENST00000461873 GJD2Q9UKL4 321 aa10.57□□□□□ -0.72
LDB1-203ENST00000461873 TMX2Q9Y320 296 aa10.57□□□□□ -0.72
LDB1-203ENST00000461873 PCDHB15Q9Y5E8 787 aa10.57□□□□□ -0.72
LDB1-203ENST00000461873 MKI67P46013 3256 aaKnown RBP10.56□□□□□ -0.72
LDB1-203ENST00000461873 SPDYE16A6NNV3 312 aaPredicted RBP10.56□□□□□ -0.72
LDB1-203ENST00000461873 TRIM6-TRIM34B2RNG4 842 aa10.56□□□□□ -0.72
LDB1-203ENST00000461873 MSCO60682 206 aa10.56□□□□□ -0.72
LDB1-203ENST00000461873 PEX10O60683 326 aa10.56□□□□□ -0.72
LDB1-203ENST00000461873 SLC25A27O95847 323 aa10.56□□□□□ -0.72
LDB1-203ENST00000461873 PTPREP23469 700 aa10.56□□□□□ -0.72
LDB1-203ENST00000461873 DSG3P32926 999 aa10.56□□□□□ -0.72
LDB1-203ENST00000461873 GUCY1A2P33402 732 aa10.56□□□□□ -0.72
LDB1-203ENST00000461873 COPB2P35606 906 aa10.56□□□□□ -0.72
LDB1-203ENST00000461873 SBK1Q52WX2 424 aa10.56□□□□□ -0.72
LDB1-203ENST00000461873 LBX2Q6XYB7 198 aa10.56□□□□□ -0.72
LDB1-203ENST00000461873 TRIB2Q92519 343 aa10.56□□□□□ -0.72
LDB1-203ENST00000461873 EVI5LQ96CN4 794 aa10.56□□□□□ -0.72
LDB1-203ENST00000461873 SHISA4Q96DD7 197 aa10.56□□□□□ -0.72
LDB1-203ENST00000461873 PAWRQ96IZ0 340 aaKnown RBP10.56□□□□□ -0.72
LDB1-203ENST00000461873 NBPF3Q9H094 633 aa10.56□□□□□ -0.72
LDB1-203ENST00000461873 SPATC1LQ9H0A9 340 aa10.56□□□□□ -0.72
LDB1-203ENST00000461873 A0A1W2PRG0 241 aa10.55□□□□□ -0.72
LDB1-203ENST00000461873 H0YGN5 161 aa10.55□□□□□ -0.72
LDB1-203ENST00000461873 FCER1AP12319 257 aa10.55□□□□□ -0.72
LDB1-203ENST00000461873 SLC4A3P48751 1232 aa10.55□□□□□ -0.72
LDB1-203ENST00000461873 IKQ13123 557 aaPredicted RBP10.55□□□□□ -0.72
LDB1-203ENST00000461873 KCTD2Q14681 263 aa10.55□□□□□ -0.72
LDB1-203ENST00000461873 IFNL3Q8IZI9 196 aa10.55□□□□□ -0.72
LDB1-203ENST00000461873 SHCBP1Q8NEM2 672 aa10.55□□□□□ -0.72
LDB1-203ENST00000461873 OSBP2Q969R2 916 aa10.55□□□□□ -0.72
LDB1-203ENST00000461873 C11orf49Q9H6J7 331 aa10.55□□□□□ -0.72
LDB1-203ENST00000461873 TOMM22Q9NS69 142 aa10.55□□□□□ -0.72
LDB1-203ENST00000461873 CLIP2Q9UDT6 1046 aa10.55□□□□□ -0.72
LDB1-203ENST00000461873 TSPY2A6NKD2 308 aa10.54□□□□□ -0.72
LDB1-203ENST00000461873 GSG1L2A8MUP6 293 aa10.54□□□□□ -0.72
LDB1-203ENST00000461873 ZBED4O75132 1171 aa10.54□□□□□ -0.72
LDB1-203ENST00000461873 SLC34A2O95436 690 aa10.54□□□□□ -0.72
LDB1-203ENST00000461873 ERCC3P19447 782 aa10.54□□□□□ -0.72
LDB1-203ENST00000461873 MFAP1P55081 439 aaKnown RBP10.54□□□□□ -0.72
LDB1-203ENST00000461873 EVX2Q03828 476 aa10.54□□□□□ -0.72
LDB1-203ENST00000461873 CACNB2Q08289 660 aaPredicted RBP10.54□□□□□ -0.72
LDB1-203ENST00000461873 HDAC1Q13547 482 aaPredicted RBP10.54□□□□□ -0.72
LDB1-203ENST00000461873 DDX60LQ5H9U9 1706 aaKnown RBP10.54□□□□□ -0.72
LDB1-203ENST00000461873 HABP4Q5JVS0 413 aaKnown RBP10.54□□□□□ -0.72
LDB1-203ENST00000461873 MORN1Q5T089 497 aa10.54□□□□□ -0.72
LDB1-203ENST00000461873 B4GALNT3Q6L9W6 998 aa10.54□□□□□ -0.72
LDB1-203ENST00000461873 RILPL2Q969X0 211 aa10.54□□□□□ -0.72
LDB1-203ENST00000461873 MMP19Q99542 508 aa10.54□□□□□ -0.72
LDB1-203ENST00000461873 MOV10L1Q9BXT6 1211 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms