RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 MFSD14CQ5VZR4 134 aa18.59■□□□□ 0.57
SF3A3-203ENST00000461869 TSHZ3Q63HK5 1081 aa18.59■□□□□ 0.57
SF3A3-203ENST00000461869 TATDN1Q6P1N9 297 aa18.59■□□□□ 0.57
SF3A3-203ENST00000461869 TLR7Q9NYK1 1049 aaKnown RBP18.59■□□□□ 0.57
SF3A3-203ENST00000461869 SERPINB13Q9UIV8 391 aa18.59■□□□□ 0.57
SF3A3-203ENST00000461869 CDK5RAP2Q96SN8 1893 aa18.58■□□□□ 0.57
SF3A3-203ENST00000461869 FOCADQ5VW36 1801 aa18.58■□□□□ 0.57
SF3A3-203ENST00000461869 TRIM6-TRIM34B2RNG4 842 aa18.58■□□□□ 0.56
SF3A3-203ENST00000461869 ATP5JP18859 108 aa18.58■□□□□ 0.56
SF3A3-203ENST00000461869 USP14P54578 494 aa18.58■□□□□ 0.56
SF3A3-203ENST00000461869 CERKLQ49MI3 558 aaPredicted RBP18.58■□□□□ 0.56
SF3A3-203ENST00000461869 CATSPERGQ6ZRH7 1159 aa18.58■□□□□ 0.56
SF3A3-203ENST00000461869 CERS3Q8IU89 383 aa18.58■□□□□ 0.56
SF3A3-203ENST00000461869 SENP6Q9GZR1 1112 aaPredicted RBP18.58■□□□□ 0.56
SF3A3-203ENST00000461869 TSHZ2Q9NRE2 1034 aa18.58■□□□□ 0.56
SF3A3-203ENST00000461869 SLC15A5A6NIM6 579 aa18.57■□□□□ 0.56
SF3A3-203ENST00000461869 PTPREP23469 700 aa18.57■□□□□ 0.56
SF3A3-203ENST00000461869 ABCB5Q2M3G0 1257 aa18.57■□□□□ 0.56
SF3A3-203ENST00000461869 MAGEB6Q8N7X4 407 aa18.57■□□□□ 0.56
SF3A3-203ENST00000461869 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.57■□□□□ 0.56
SF3A3-203ENST00000461869 KIAA1683Q9H0B3 1180 aa18.57■□□□□ 0.56
SF3A3-203ENST00000461869 EHD4Q9H223 541 aa18.57■□□□□ 0.56
SF3A3-203ENST00000461869 UPF2Q9HAU5 1272 aaKnown RBP18.57■□□□□ 0.56
SF3A3-203ENST00000461869 FLRT1Q9NZU1 646 aa18.57■□□□□ 0.56
SF3A3-203ENST00000461869 VCAM1P19320 739 aa18.56■□□□□ 0.56
SF3A3-203ENST00000461869 CNGA1P29973 690 aa18.56■□□□□ 0.56
SF3A3-203ENST00000461869 ATP2B2Q01814 1243 aa18.56■□□□□ 0.56
SF3A3-203ENST00000461869 TTC6Q86TZ1 520 aa18.56■□□□□ 0.56
SF3A3-203ENST00000461869 ACER1Q8TDN7 264 aa18.56■□□□□ 0.56
SF3A3-203ENST00000461869 CABP5Q9NP86 173 aa18.56■□□□□ 0.56
SF3A3-203ENST00000461869 BTBD7Q9P203 1132 aa18.56■□□□□ 0.56
SF3A3-203ENST00000461869 DDX20Q9UHI6 824 aaKnown RBP18.56■□□□□ 0.56
SF3A3-203ENST00000461869 IVNS1ABPQ9Y6Y0 642 aa18.56■□□□□ 0.56
SF3A3-203ENST00000461869 MYO5AQ9Y4I1 1855 aaKnown RBP18.55■□□□□ 0.56
SF3A3-203ENST00000461869 RILPL2Q969X0 211 aa18.55■□□□□ 0.56
SF3A3-203ENST00000461869 LBHD1Q9BQE6 289 aaPredicted RBP18.55■□□□□ 0.56
SF3A3-203ENST00000461869 MSCO60682 206 aa18.54■□□□□ 0.56
SF3A3-203ENST00000461869 MAP3K12Q12852 859 aa18.54■□□□□ 0.56
SF3A3-203ENST00000461869 GRB14Q14449 540 aa18.54■□□□□ 0.56
SF3A3-203ENST00000461869 LBX2Q6XYB7 198 aa18.54■□□□□ 0.56
SF3A3-203ENST00000461869 NPLOC4Q8TAT6 608 aa18.54■□□□□ 0.56
SF3A3-203ENST00000461869 LPAR1Q92633 364 aa18.54■□□□□ 0.56
SF3A3-203ENST00000461869 EVI5LQ96CN4 794 aa18.54■□□□□ 0.56
SF3A3-203ENST00000461869 RPAP3Q9H6T3 665 aaPredicted RBP18.54■□□□□ 0.56
SF3A3-203ENST00000461869 ANTXR1Q9H6X2 564 aa18.54■□□□□ 0.56
SF3A3-203ENST00000461869 COL6A3P12111 3177 aa18.54■□□□□ 0.56
SF3A3-203ENST00000461869 SPDYE16A6NNV3 312 aaPredicted RBP18.53■□□□□ 0.56
SF3A3-203ENST00000461869 HOXC6P09630 235 aa18.53■□□□□ 0.56
SF3A3-203ENST00000461869 CYP2C19P33261 490 aa18.53■□□□□ 0.56
SF3A3-203ENST00000461869 PLCD1P51178 756 aa18.53■□□□□ 0.56
SF3A3-203ENST00000461869 ATN1P54259 1190 aaPredicted RBP18.53■□□□□ 0.56
SF3A3-203ENST00000461869 TICAM2Q86XR7 235 aa18.53■□□□□ 0.56
SF3A3-203ENST00000461869 HIP1O00291 1037 aa18.52■□□□□ 0.56
SF3A3-203ENST00000461869 DNM1LO00429 736 aa18.52■□□□□ 0.56
SF3A3-203ENST00000461869 SHMT1P34896 483 aa18.52■□□□□ 0.56
SF3A3-203ENST00000461869 TMED8Q6PL24 325 aaPredicted RBP18.52■□□□□ 0.56
SF3A3-203ENST00000461869 HAUS7Q99871 368 aa18.52■□□□□ 0.56
SF3A3-203ENST00000461869 BOLA2Q9H3K6 86 aa18.52■□□□□ 0.56
SF3A3-203ENST00000461869 MYH1P12882 1939 aa18.52■□□□□ 0.56
SF3A3-203ENST00000461869 POLR3DP05423 398 aaPredicted RBP18.51■□□□□ 0.55
SF3A3-203ENST00000461869 GUCY1A2P33402 732 aa18.51■□□□□ 0.55
SF3A3-203ENST00000461869 SEPT2Q15019 361 aa18.51■□□□□ 0.55
SF3A3-203ENST00000461869 DPP9Q86TI2 863 aa18.51■□□□□ 0.55
SF3A3-203ENST00000461869 TRPV1Q8NER1 839 aa18.51■□□□□ 0.55
SF3A3-203ENST00000461869 PRKAG2Q9UGJ0 569 aa18.51■□□□□ 0.55
SF3A3-203ENST00000461869 POTEB2H3BUK9 544 aa18.5■□□□□ 0.55
SF3A3-203ENST00000461869 COG2Q14746 738 aa18.5■□□□□ 0.55
SF3A3-203ENST00000461869 FAM109BQ6ICB4 259 aaPredicted RBP18.5■□□□□ 0.55
SF3A3-203ENST00000461869 RIOK1Q9BRS2 568 aaKnown RBP18.5■□□□□ 0.55
SF3A3-203ENST00000461869 HOXC10Q9NYD6 342 aa18.5■□□□□ 0.55
SF3A3-203ENST00000461869 MAGEB6P1A0A0J9YX57 407 aa18.49■□□□□ 0.55
SF3A3-203ENST00000461869 MPHOSPH10O00566 681 aaKnown RBP18.49■□□□□ 0.55
SF3A3-203ENST00000461869 STRNO43815 780 aa18.49■□□□□ 0.55
SF3A3-203ENST00000461869 CYBAP13498 195 aa18.49■□□□□ 0.55
SF3A3-203ENST00000461869 RTP1P59025 263 aa18.49■□□□□ 0.55
SF3A3-203ENST00000461869 GABPAQ06546 454 aa18.49■□□□□ 0.55
SF3A3-203ENST00000461869 LRRFIP1Q32MZ4 808 aaKnown RBP18.49■□□□□ 0.55
SF3A3-203ENST00000461869 GJC2Q5T442 439 aaPredicted RBP18.49■□□□□ 0.55
SF3A3-203ENST00000461869 ARRDC4Q8NCT1 418 aa18.49■□□□□ 0.55
SF3A3-203ENST00000461869 MOV10L1Q9BXT6 1211 aaKnown RBP18.49■□□□□ 0.55
SF3A3-203ENST00000461869 FRMPD3Q5JV73 1810 aa18.49■□□□□ 0.55
SF3A3-203ENST00000461869 A0A1W2PRG0 241 aa18.48■□□□□ 0.55
SF3A3-203ENST00000461869 IGHA2P01877 340 aa18.48■□□□□ 0.55
SF3A3-203ENST00000461869 ADORA2AP29274 412 aa18.48■□□□□ 0.55
SF3A3-203ENST00000461869 OLFML2BQ68BL8 750 aa18.48■□□□□ 0.55
SF3A3-203ENST00000461869 RUFY2Q8WXA3 655 aa18.48■□□□□ 0.55
SF3A3-203ENST00000461869 FAM161BQ96MY7 647 aa18.48■□□□□ 0.55
SF3A3-203ENST00000461869 DNAJC2Q99543 621 aaKnown RBP18.48■□□□□ 0.55
SF3A3-203ENST00000461869 FSD1Q9BTV5 496 aa18.48■□□□□ 0.55
SF3A3-203ENST00000461869 TANGO6Q9C0B7 1094 aa18.48■□□□□ 0.55
SF3A3-203ENST00000461869 DIAPH3Q9NSV4 1193 aa18.48■□□□□ 0.55
SF3A3-203ENST00000461869 ATP11BQ9Y2G3 1177 aa18.48■□□□□ 0.55
SF3A3-203ENST00000461869 REC8O95072 547 aa18.47■□□□□ 0.55
SF3A3-203ENST00000461869 CHMLP26374 656 aa18.47■□□□□ 0.55
SF3A3-203ENST00000461869 TTF1Q15361 905 aaPredicted RBP18.47■□□□□ 0.55
SF3A3-203ENST00000461869 GUCD1Q96NT3 240 aa18.47■□□□□ 0.55
SF3A3-203ENST00000461869 CRNKL1Q9BZJ0 848 aaKnown RBP18.47■□□□□ 0.55
SF3A3-203ENST00000461869 SPATC1LQ9H0A9 340 aa18.47■□□□□ 0.55
SF3A3-203ENST00000461869 PAG1Q9NWQ8 432 aa18.47■□□□□ 0.55
SF3A3-203ENST00000461869 MCM9Q9NXL9 1143 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms