RNA–Protein interactions for RNA: ENST00000461762.5

C9orf78-204, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-204ENST00000461762 A0A0U1RQJ8 604 aa17.13■□□□□ 0.33
C9orf78-204ENST00000461762 CCDC66A2RUB6 948 aa17.13■□□□□ 0.33
C9orf78-204ENST00000461762 PCP11498 1178 aaKnown RBP17.13■□□□□ 0.33
C9orf78-204ENST00000461762 TXLNAP40222 546 aa17.13■□□□□ 0.33
C9orf78-204ENST00000461762 FILIP1LQ4L180 1135 aa17.13■□□□□ 0.33
C9orf78-204ENST00000461762 ATRIPQ8WXE1 791 aa17.13■□□□□ 0.33
C9orf78-204ENST00000461762 BRMS1Q9HCU9 246 aa17.13■□□□□ 0.33
C9orf78-204ENST00000461762 LZTFL1Q9NQ48 299 aa17.13■□□□□ 0.33
C9orf78-204ENST00000461762 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.13■□□□□ 0.33
C9orf78-204ENST00000461762 LIMA1Q9UHB6 759 aaKnown RBP17.13■□□□□ 0.33
C9orf78-204ENST00000461762 CYP2D7A0A087X1C5 515 aa17.12■□□□□ 0.33
C9orf78-204ENST00000461762 DDAH1O94760 285 aa17.12■□□□□ 0.33
C9orf78-204ENST00000461762 GYPCP04921 128 aa17.12■□□□□ 0.33
C9orf78-204ENST00000461762 CASP14P31944 242 aa17.12■□□□□ 0.33
C9orf78-204ENST00000461762 CRKLP46109 303 aaKnown RBP17.12■□□□□ 0.33
C9orf78-204ENST00000461762 DYNLL1P63167 89 aaKnown RBP17.12■□□□□ 0.33
C9orf78-204ENST00000461762 PTGDRQ13258 359 aa17.12■□□□□ 0.33
C9orf78-204ENST00000461762 ARFGAP3Q9NP61 516 aa17.12■□□□□ 0.33
C9orf78-204ENST00000461762 XDHP47989 1333 aa17.12■□□□□ 0.33
C9orf78-204ENST00000461762 GYG1P46976 350 aa17.11■□□□□ 0.33
C9orf78-204ENST00000461762 FXR1P51114 621 aaKnown RBP eCLIP17.11■□□□□ 0.33
C9orf78-204ENST00000461762 JAKMIP3Q5VZ66 844 aa17.11■□□□□ 0.33
C9orf78-204ENST00000461762 SRGAP1Q7Z6B7 1085 aa17.11■□□□□ 0.33
C9orf78-204ENST00000461762 IQCA1Q86XH1 822 aa17.11■□□□□ 0.33
C9orf78-204ENST00000461762 CNGA4Q8IV77 575 aa17.11■□□□□ 0.33
C9orf78-204ENST00000461762 ZNF384Q8TF68 577 aa17.11■□□□□ 0.33
C9orf78-204ENST00000461762 CDC5LQ99459 802 aaKnown RBP17.11■□□□□ 0.33
C9orf78-204ENST00000461762 FUT8Q9BYC5 575 aa17.11■□□□□ 0.33
C9orf78-204ENST00000461762 GNL3LQ9NVN8 582 aaKnown RBP17.11■□□□□ 0.33
C9orf78-204ENST00000461762 TUBB2AQ13885 445 aa17.11■□□□□ 0.33
C9orf78-204ENST00000461762 PDXDC2PQ6P474 469 aa17.11■□□□□ 0.33
C9orf78-204ENST00000461762 CTR9Q6PD62 1173 aa17.11■□□□□ 0.33
C9orf78-204ENST00000461762 SRBD1Q8N5C6 995 aaKnown RBP17.11■□□□□ 0.33
C9orf78-204ENST00000461762 IQUBQ8NA54 791 aa17.11■□□□□ 0.33
C9orf78-204ENST00000461762 MTRQ99707 1265 aa17.11■□□□□ 0.33
C9orf78-204ENST00000461762 TUBB2BQ9BVA1 445 aa17.11■□□□□ 0.33
C9orf78-204ENST00000461762 CDC23Q9UJX2 597 aa17.11■□□□□ 0.33
C9orf78-204ENST00000461762 CNTNAP5Q8WYK1 1306 aa17.1■□□□□ 0.33
C9orf78-204ENST00000461762 WTIPA6NIX2 430 aaPredicted RBP17.1■□□□□ 0.33
C9orf78-204ENST00000461762 KIF5CO60282 957 aa17.1■□□□□ 0.33
C9orf78-204ENST00000461762 IL17AQ16552 155 aa17.1■□□□□ 0.33
C9orf78-204ENST00000461762 RWDD2AQ9UIY3 292 aa17.1■□□□□ 0.33
C9orf78-204ENST00000461762 NIP7Q9Y221 180 aaKnown RBP eCLIP17.1■□□□□ 0.33
C9orf78-204ENST00000461762 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.1■□□□□ 0.33
C9orf78-204ENST00000461762 DUOX1Q9NRD9 1551 aa17.1■□□□□ 0.33
C9orf78-204ENST00000461762 COL1A1P02452 1464 aaPredicted RBP17.1■□□□□ 0.33
C9orf78-204ENST00000461762 TRAPPC10P48553 1259 aa17.1■□□□□ 0.33
C9orf78-204ENST00000461762 UBE4AQ14139 1066 aa17.1■□□□□ 0.33
C9orf78-204ENST00000461762 BRD3Q15059 726 aa17.1■□□□□ 0.33
C9orf78-204ENST00000461762 KRT31Q15323 416 aa17.1■□□□□ 0.33
C9orf78-204ENST00000461762 STAMQ92783 540 aa17.1■□□□□ 0.33
C9orf78-204ENST00000461762 CTNND2Q9UQB3 1225 aa17.1■□□□□ 0.33
C9orf78-204ENST00000461762 CCDC151A5D8V7 595 aa17.09■□□□□ 0.33
C9orf78-204ENST00000461762 CHMP4BP1P59074 171 aa17.09■□□□□ 0.33
C9orf78-204ENST00000461762 SMC1AQ14683 1233 aaKnown RBP17.09■□□□□ 0.33
C9orf78-204ENST00000461762 TMTC1Q8IUR5 882 aa17.09■□□□□ 0.33
C9orf78-204ENST00000461762 GTPBP6O43824 516 aaPredicted RBP17.09■□□□□ 0.33
C9orf78-204ENST00000461762 CEP112Q8N8E3 955 aa17.09■□□□□ 0.33
C9orf78-204ENST00000461762 PYM1Q9BRP8 204 aaKnown RBP17.09■□□□□ 0.33
C9orf78-204ENST00000461762 BLZF1Q9H2G9 400 aa17.09■□□□□ 0.33
C9orf78-204ENST00000461762 TTF2Q9UNY4 1162 aaKnown RBP17.09■□□□□ 0.33
C9orf78-204ENST00000461762 RNF225M0QZC1 329 aaPredicted RBP17.08■□□□□ 0.33
C9orf78-204ENST00000461762 POLR3GO15318 223 aaPredicted RBP17.08■□□□□ 0.33
C9orf78-204ENST00000461762 ORC4O43929 436 aa17.08■□□□□ 0.33
C9orf78-204ENST00000461762 ZNF569Q5MCW4 686 aa17.08■□□□□ 0.33
C9orf78-204ENST00000461762 RRAGBQ5VZM2 374 aa17.08■□□□□ 0.33
C9orf78-204ENST00000461762 HNRNPLLQ8WVV9 542 aaKnown RBP17.08■□□□□ 0.33
C9orf78-204ENST00000461762 ANKZF1Q9H8Y5 726 aa17.08■□□□□ 0.33
C9orf78-204ENST00000461762 CICQ96RK0 1608 aaPredicted RBP17.08■□□□□ 0.32
C9orf78-204ENST00000461762 COL4A1P02462 1669 aa17.08■□□□□ 0.32
C9orf78-204ENST00000461762 ERICH4A6NGS2 130 aa17.08■□□□□ 0.32
C9orf78-204ENST00000461762 USP17L12C9JPN9 530 aa17.08■□□□□ 0.32
C9orf78-204ENST00000461762 USP17L21D6R901 530 aa17.08■□□□□ 0.32
C9orf78-204ENST00000461762 MAP2K7O14733 419 aa17.08■□□□□ 0.32
C9orf78-204ENST00000461762 COBLO75128 1261 aa17.08■□□□□ 0.32
C9orf78-204ENST00000461762 ATP6V1AP38606 617 aa17.08■□□□□ 0.32
C9orf78-204ENST00000461762 ERVK-24P63145 666 aa17.08■□□□□ 0.32
C9orf78-204ENST00000461762 LONRF2Q1L5Z9 754 aa17.08■□□□□ 0.32
C9orf78-204ENST00000461762 FAM84BQ96KN1 310 aaPredicted RBP17.08■□□□□ 0.32
C9orf78-204ENST00000461762 ZCCHC17Q9NP64 241 aaKnown RBP17.08■□□□□ 0.32
C9orf78-204ENST00000461762 RAB21Q9UL25 225 aa17.08■□□□□ 0.32
C9orf78-204ENST00000461762 WNK3Q9BYP7 1800 aa17.07■□□□□ 0.32
C9orf78-204ENST00000461762 COL22A1Q8NFW1 1626 aaPredicted RBP17.07■□□□□ 0.32
C9orf78-204ENST00000461762 N4BP3O15049 544 aa17.07■□□□□ 0.32
C9orf78-204ENST00000461762 SCG2P13521 617 aa17.07■□□□□ 0.32
C9orf78-204ENST00000461762 OAS2P29728 719 aaKnown RBP17.07■□□□□ 0.32
C9orf78-204ENST00000461762 CCT6AP40227 531 aaKnown RBP17.07■□□□□ 0.32
C9orf78-204ENST00000461762 COPB1P53618 953 aaKnown RBP17.07■□□□□ 0.32
C9orf78-204ENST00000461762 TUBB4BP68371 445 aa17.07■□□□□ 0.32
C9orf78-204ENST00000461762 SPAG1Q07617 926 aa17.07■□□□□ 0.32
C9orf78-204ENST00000461762 C4orf32Q8N8J7 132 aa17.07■□□□□ 0.32
C9orf78-204ENST00000461762 CDCA7Q9BWT1 371 aaPredicted RBP17.07■□□□□ 0.32
C9orf78-204ENST00000461762 ABHD10Q9NUJ1 306 aa17.07■□□□□ 0.32
C9orf78-204ENST00000461762 CACNA1SQ13698 1873 aa17.07■□□□□ 0.32
C9orf78-204ENST00000461762 ADAMTS3O15072 1205 aa17.07■□□□□ 0.32
C9orf78-204ENST00000461762 VEGFAP15692 232 aaPredicted RBP17.07■□□□□ 0.32
C9orf78-204ENST00000461762 USP5P45974 858 aa17.07■□□□□ 0.32
C9orf78-204ENST00000461762 PFKFB3Q16875 520 aaPredicted RBP17.07■□□□□ 0.32
C9orf78-204ENST00000461762 TCP11X2Q5H9J9 407 aa17.07■□□□□ 0.32
C9orf78-204ENST00000461762 ZNF658Q5TYW1 1059 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms