RNA–Protein interactions for RNA: ENST00000461661.1

ITCH-203, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene ITCH, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-203ENST00000461661 REXO1Q8N1G1 1221 aaKnown RBP4.78□□□□□ -1.64
ITCH-203ENST00000461661 NT5C1AQ9BXI3 368 aa4.78□□□□□ -1.64
ITCH-203ENST00000461661 BCL11AQ9H165 835 aa4.78□□□□□ -1.64
ITCH-203ENST00000461661 SLAMF8Q9P0V8 285 aa4.78□□□□□ -1.64
ITCH-203ENST00000461661 C8AP07357 584 aa4.77□□□□□ -1.65
ITCH-203ENST00000461661 YBX3P16989 372 aaKnown RBP eCLIP4.77□□□□□ -1.654e-6■□□□□ 11.2
ITCH-203ENST00000461661 POLR2BP30876 1174 aaKnown RBP4.77□□□□□ -1.65
ITCH-203ENST00000461661 GBP1P32455 592 aa4.77□□□□□ -1.65
ITCH-203ENST00000461661 ZNF76P36508 570 aa4.77□□□□□ -1.65
ITCH-203ENST00000461661 OVOS1Q6IE37 1185 aa4.77□□□□□ -1.65
ITCH-203ENST00000461661 GK5Q6ZS86 529 aa4.77□□□□□ -1.65
ITCH-203ENST00000461661 SLITRK4Q8IW52 837 aa4.77□□□□□ -1.65
ITCH-203ENST00000461661 ATG4CQ96DT6 458 aa4.77□□□□□ -1.65
ITCH-203ENST00000461661 KIRREL1Q96J84 757 aa4.77□□□□□ -1.65
ITCH-203ENST00000461661 ADAMTS10Q9H324 1103 aa4.77□□□□□ -1.65
ITCH-203ENST00000461661 ANTXR1Q9H6X2 564 aa4.77□□□□□ -1.65
ITCH-203ENST00000461661 CNNM2Q9H8M5 875 aa4.77□□□□□ -1.65
ITCH-203ENST00000461661 DUSP13Q9UII6 198 aa4.77□□□□□ -1.65
ITCH-203ENST00000461661 GLI1P08151 1106 aa4.76□□□□□ -1.65
ITCH-203ENST00000461661 RAG1P15918 1043 aa4.76□□□□□ -1.65
ITCH-203ENST00000461661 MCM4P33991 863 aa4.76□□□□□ -1.65
ITCH-203ENST00000461661 ERVFC1P60507 584 aa4.76□□□□□ -1.65
ITCH-203ENST00000461661 EGR3Q06889 387 aa4.76□□□□□ -1.65
ITCH-203ENST00000461661 MESP2Q0VG99 397 aa4.76□□□□□ -1.65
ITCH-203ENST00000461661 ZNF394Q53GI3 561 aa4.76□□□□□ -1.65
ITCH-203ENST00000461661 ZNF648Q5T619 568 aaPredicted RBP4.76□□□□□ -1.65
ITCH-203ENST00000461661 NLRC3Q7RTR2 1065 aa4.76□□□□□ -1.65
ITCH-203ENST00000461661 TTC6Q86TZ1 520 aa4.76□□□□□ -1.65
ITCH-203ENST00000461661 KIAA0825Q8IV33 1275 aa4.76□□□□□ -1.65
ITCH-203ENST00000461661 NKD1Q969G9 470 aa4.76□□□□□ -1.65
ITCH-203ENST00000461661 LIN37Q96GY3 246 aaPredicted RBP4.76□□□□□ -1.65
ITCH-203ENST00000461661 CCDC120Q96HB5 630 aa4.76□□□□□ -1.65
ITCH-203ENST00000461661 SPON2Q9BUD6 331 aa4.76□□□□□ -1.65
ITCH-203ENST00000461661 SP110Q9HB58 689 aa4.76□□□□□ -1.65
ITCH-203ENST00000461661 METTL5Q9NRN9 209 aaKnown RBP4.76□□□□□ -1.65
ITCH-203ENST00000461661 TMEM59LQ9UK28 342 aa4.76□□□□□ -1.65
ITCH-203ENST00000461661 PCDHA11Q9Y5I1 949 aa4.76□□□□□ -1.65
ITCH-203ENST00000461661 LRRC10BA6NIK2 292 aa4.75□□□□□ -1.65
ITCH-203ENST00000461661 MEIS3P2A8K0S8 358 aa4.75□□□□□ -1.65
ITCH-203ENST00000461661 RECKO95980 971 aa4.75□□□□□ -1.65
ITCH-203ENST00000461661 ZNF165P49910 485 aa4.75□□□□□ -1.65
ITCH-203ENST00000461661 HK2P52789 917 aa4.75□□□□□ -1.65
ITCH-203ENST00000461661 RACK1P63244 317 aaKnown RBP4.75□□□□□ -1.65
ITCH-203ENST00000461661 NBPF12Q5TAG4 269 aaPredicted RBP4.75□□□□□ -1.65
ITCH-203ENST00000461661 USP48Q86UV5 1035 aa4.75□□□□□ -1.65
ITCH-203ENST00000461661 KRTAP9-9Q9BYP9 154 aa4.75□□□□□ -1.65
ITCH-203ENST00000461661 KRTAP9-4Q9BYQ2 154 aa4.75□□□□□ -1.65
ITCH-203ENST00000461661 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.75□□□□□ -1.65
ITCH-203ENST00000461661 PCDHGB7Q9Y5F8 929 aa4.75□□□□□ -1.65
ITCH-203ENST00000461661 FARP2O94887 1054 aaPredicted RBP4.74□□□□□ -1.65
ITCH-203ENST00000461661 HPXP02790 462 aa4.74□□□□□ -1.65
ITCH-203ENST00000461661 ZGLP1P0C6A0 271 aa4.74□□□□□ -1.65
ITCH-203ENST00000461661 NME1P15531 152 aaKnown RBP4.74□□□□□ -1.65
ITCH-203ENST00000461661 VAMP1P23763 118 aa4.74□□□□□ -1.65
ITCH-203ENST00000461661 TRIM26Q12899 539 aaPredicted RBP4.74□□□□□ -1.65
ITCH-203ENST00000461661 NMIQ13287 307 aaPredicted RBP4.74□□□□□ -1.65
ITCH-203ENST00000461661 MLANAQ16655 118 aa4.74□□□□□ -1.65
ITCH-203ENST00000461661 NBPF9Q3BBW0 867 aa4.74□□□□□ -1.65
ITCH-203ENST00000461661 TMEM67Q5HYA8 995 aa4.74□□□□□ -1.65
ITCH-203ENST00000461661 TMEM192Q8IY95 271 aa4.74□□□□□ -1.65
ITCH-203ENST00000461661 ABHD4Q8TB40 342 aa4.74□□□□□ -1.65
ITCH-203ENST00000461661 ENOX1Q8TC92 643 aaKnown RBP4.74□□□□□ -1.65
ITCH-203ENST00000461661 RNF34Q969K3 372 aa4.74□□□□□ -1.65
ITCH-203ENST00000461661 FAM53CQ9NYF3 392 aa4.74□□□□□ -1.65
ITCH-203ENST00000461661 EBF1Q9UH73 591 aa4.74□□□□□ -1.65
ITCH-203ENST00000461661 DDX41Q9UJV9 622 aaKnown RBP4.74□□□□□ -1.65
ITCH-203ENST00000461661 ZNF281Q9Y2X9 895 aa4.74□□□□□ -1.65
ITCH-203ENST00000461661 TNFRSF10CO14798 259 aa4.73□□□□□ -1.65
ITCH-203ENST00000461661 LTKP29376 864 aa4.73□□□□□ -1.65
ITCH-203ENST00000461661 CCNFP41002 786 aa4.73□□□□□ -1.65
ITCH-203ENST00000461661 RNF4P78317 190 aa4.73□□□□□ -1.65
ITCH-203ENST00000461661 TEKQ02763 1124 aa4.73□□□□□ -1.65
ITCH-203ENST00000461661 SNW1Q13573 536 aaKnown RBP4.73□□□□□ -1.65
ITCH-203ENST00000461661 LRRFIP1Q32MZ4 808 aaKnown RBP4.73□□□□□ -1.65
ITCH-203ENST00000461661 PRR23BQ6ZRT6 265 aa4.73□□□□□ -1.65
ITCH-203ENST00000461661 TMC3Q7Z5M5 1100 aa4.73□□□□□ -1.65
ITCH-203ENST00000461661 USHBP1Q8N6Y0 703 aa4.73□□□□□ -1.65
ITCH-203ENST00000461661 SYTL5Q8TDW5 730 aaPredicted RBP4.73□□□□□ -1.65
ITCH-203ENST00000461661 SLC9A7Q96T83 725 aa4.73□□□□□ -1.65
ITCH-203ENST00000461661 HDAC8Q9BY41 377 aa4.73□□□□□ -1.65
ITCH-203ENST00000461661 ZNRF3Q9ULT6 936 aa4.73□□□□□ -1.65
ITCH-203ENST00000461661 CLEC3AO75596 197 aa4.72□□□□□ -1.65
ITCH-203ENST00000461661 ACRP10323 421 aa4.72□□□□□ -1.65
ITCH-203ENST00000461661 RAC2P15153 192 aa4.72□□□□□ -1.65
ITCH-203ENST00000461661 TRHRP34981 398 aaPredicted RBP4.72□□□□□ -1.65
ITCH-203ENST00000461661 CHMP4BP1P59074 171 aa4.72□□□□□ -1.65
ITCH-203ENST00000461661 RAD51AP2Q09MP3 1159 aa4.72□□□□□ -1.65
ITCH-203ENST00000461661 ZNF124Q15973 351 aa4.72□□□□□ -1.65
ITCH-203ENST00000461661 CLEC16AQ2KHT3 1053 aa4.72□□□□□ -1.65
ITCH-203ENST00000461661 TIGD5Q53EQ6 642 aa4.72□□□□□ -1.65
ITCH-203ENST00000461661 METTL16Q86W50 562 aaKnown RBP4.72□□□□□ -1.65
ITCH-203ENST00000461661 DAGLBQ8NCG7 672 aa4.72□□□□□ -1.65
ITCH-203ENST00000461661 PDZD8Q8NEN9 1154 aa4.72□□□□□ -1.65
ITCH-203ENST00000461661 MYLIPQ8WY64 445 aa4.72□□□□□ -1.65
ITCH-203ENST00000461661 ZNF512BQ96KM6 892 aaPredicted RBP4.72□□□□□ -1.65
ITCH-203ENST00000461661 C19orf44Q9H6X5 657 aa4.72□□□□□ -1.65
ITCH-203ENST00000461661 SCAMP3O14828 347 aaKnown RBP4.71□□□□□ -1.66
ITCH-203ENST00000461661 JAG1P78504 1218 aa4.71□□□□□ -1.66
ITCH-203ENST00000461661 INTS3Q68E01 1043 aaKnown RBP4.71□□□□□ -1.66
ITCH-203ENST00000461661 MPZL3Q6UWV2 235 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms