RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 COL9A3Q14050 684 aaPredicted RBP17.79■□□□□ 0.44
TMEM39A-203ENST00000461654 SYNE3Q6ZMZ3 975 aa17.79■□□□□ 0.44
TMEM39A-203ENST00000461654 OTOP1Q7RTM1 612 aa17.79■□□□□ 0.44
TMEM39A-203ENST00000461654 EHD4Q9H223 541 aa17.79■□□□□ 0.44
TMEM39A-203ENST00000461654 PI4KBQ9UBF8 816 aa17.79■□□□□ 0.44
TMEM39A-203ENST00000461654 SERPINB13Q9UIV8 391 aa17.79■□□□□ 0.44
TMEM39A-203ENST00000461654 TPCN1Q9ULQ1 816 aa17.79■□□□□ 0.44
TMEM39A-203ENST00000461654 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.79■□□□□ 0.44
TMEM39A-203ENST00000461654 CCDC69A6NI79 296 aa17.78■□□□□ 0.44
TMEM39A-203ENST00000461654 SH2B2O14492 632 aaPredicted RBP17.78■□□□□ 0.44
TMEM39A-203ENST00000461654 PTPRAP18433 802 aa17.78■□□□□ 0.44
TMEM39A-203ENST00000461654 CDK8P49336 464 aa17.78■□□□□ 0.44
TMEM39A-203ENST00000461654 CUL4AQ13619 759 aa17.78■□□□□ 0.44
TMEM39A-203ENST00000461654 WTAPQ15007 396 aa17.78■□□□□ 0.44
TMEM39A-203ENST00000461654 FOXP4Q8IVH2 680 aaPredicted RBP17.78■□□□□ 0.44
TMEM39A-203ENST00000461654 ZNF274Q96GC6 653 aaPredicted RBP17.78■□□□□ 0.44
TMEM39A-203ENST00000461654 INTS4Q96HW7 963 aaKnown RBP17.78■□□□□ 0.44
TMEM39A-203ENST00000461654 SLKQ9H2G2 1235 aaPredicted RBP17.78■□□□□ 0.44
TMEM39A-203ENST00000461654 PICK1Q9NRD5 415 aa17.78■□□□□ 0.44
TMEM39A-203ENST00000461654 TACC3Q9Y6A5 838 aa17.78■□□□□ 0.44
TMEM39A-203ENST00000461654 SMIM22K7EJ46 135 aa17.77■□□□□ 0.44
TMEM39A-203ENST00000461654 TSPY3P0CV98 308 aa17.77■□□□□ 0.44
TMEM39A-203ENST00000461654 TSPY8P0CW00 308 aa17.77■□□□□ 0.44
TMEM39A-203ENST00000461654 LIFRP42702 1097 aa17.77■□□□□ 0.44
TMEM39A-203ENST00000461654 TFAP4Q01664 338 aa17.77■□□□□ 0.44
TMEM39A-203ENST00000461654 APOBRQ0VD83 1088 aa17.77■□□□□ 0.44
TMEM39A-203ENST00000461654 ARHGEF6Q15052 776 aa17.77■□□□□ 0.44
TMEM39A-203ENST00000461654 ME3Q16798 604 aa17.77■□□□□ 0.44
TMEM39A-203ENST00000461654 CD99L2Q8TCZ2 262 aa17.77■□□□□ 0.44
TMEM39A-203ENST00000461654 ZSCAN10Q96SZ4 725 aaPredicted RBP17.77■□□□□ 0.44
TMEM39A-203ENST00000461654 CWC22Q9HCG8 908 aaKnown RBP17.77■□□□□ 0.44
TMEM39A-203ENST00000461654 FOXD4L1Q9NU39 408 aa17.77■□□□□ 0.44
TMEM39A-203ENST00000461654 HERC5Q9UII4 1024 aaKnown RBP17.77■□□□□ 0.44
TMEM39A-203ENST00000461654 AFG3L2Q9Y4W6 797 aa17.77■□□□□ 0.44
TMEM39A-203ENST00000461654 TRIM17Q9Y577 477 aa17.77■□□□□ 0.44
TMEM39A-203ENST00000461654 ZHX2Q9Y6X8 837 aa17.77■□□□□ 0.44
TMEM39A-203ENST00000461654 KLF18A0A0U1RQI7 1052 aa17.76■□□□□ 0.43
TMEM39A-203ENST00000461654 MLLT1Q03111 559 aaPredicted RBP17.76■□□□□ 0.43
TMEM39A-203ENST00000461654 EVX2Q03828 476 aa17.76■□□□□ 0.43
TMEM39A-203ENST00000461654 FASTKD5Q7L8L6 764 aaKnown RBP17.76■□□□□ 0.43
TMEM39A-203ENST00000461654 IGDCC4Q8TDY8 1250 aa17.76■□□□□ 0.43
TMEM39A-203ENST00000461654 ZKSCAN3Q9BRR0 538 aa17.76■□□□□ 0.43
TMEM39A-203ENST00000461654 EFCC1Q9HA90 598 aa17.76■□□□□ 0.43
TMEM39A-203ENST00000461654 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.76■□□□□ 0.43
TMEM39A-203ENST00000461654 PTPN22Q9Y2R2 807 aa17.76■□□□□ 0.43
TMEM39A-203ENST00000461654 FOCADQ5VW36 1801 aa17.76■□□□□ 0.43
TMEM39A-203ENST00000461654 CDK5RAP2Q96SN8 1893 aa17.75■□□□□ 0.43
TMEM39A-203ENST00000461654 DDX60LQ5H9U9 1706 aaKnown RBP17.75■□□□□ 0.43
TMEM39A-203ENST00000461654 TNKSO95271 1327 aa17.75■□□□□ 0.43
TMEM39A-203ENST00000461654 A0A0G2JLL6 359 aaPredicted RBP17.75■□□□□ 0.43
TMEM39A-203ENST00000461654 PDHXO00330 501 aa17.75■□□□□ 0.43
TMEM39A-203ENST00000461654 DHX16O60231 1041 aaKnown RBP17.75■□□□□ 0.43
TMEM39A-203ENST00000461654 SLURP2P0DP57 97 aa17.75■□□□□ 0.43
TMEM39A-203ENST00000461654 EVCP57679 992 aa17.75■□□□□ 0.43
TMEM39A-203ENST00000461654 STK3Q13188 491 aa17.75■□□□□ 0.43
TMEM39A-203ENST00000461654 FAM47AQ5JRC9 791 aa17.75■□□□□ 0.43
TMEM39A-203ENST00000461654 GPAT2Q6NUI2 795 aa17.75■□□□□ 0.43
TMEM39A-203ENST00000461654 C17orf99Q6UX52 265 aa17.75■□□□□ 0.43
TMEM39A-203ENST00000461654 PRRT2Q7Z6L0 340 aaPredicted RBP17.75■□□□□ 0.43
TMEM39A-203ENST00000461654 METTL16Q86W50 562 aaKnown RBP17.75■□□□□ 0.43
TMEM39A-203ENST00000461654 CCDC83Q8IWF9 413 aa17.75■□□□□ 0.43
TMEM39A-203ENST00000461654 SLC45A1Q9Y2W3 748 aa17.75■□□□□ 0.43
TMEM39A-203ENST00000461654 SLC12A7Q9Y666 1083 aa17.75■□□□□ 0.43
TMEM39A-203ENST00000461654 MYH1P12882 1939 aa17.74■□□□□ 0.43
TMEM39A-203ENST00000461654 GOLGA8BA8MQT2 603 aa17.74■□□□□ 0.43
TMEM39A-203ENST00000461654 PFKFB2O60825 505 aa17.74■□□□□ 0.43
TMEM39A-203ENST00000461654 RASA1P20936 1047 aa17.74■□□□□ 0.43
TMEM39A-203ENST00000461654 CAP2P40123 477 aa17.74■□□□□ 0.43
TMEM39A-203ENST00000461654 CAP1Q01518 475 aa17.74■□□□□ 0.43
TMEM39A-203ENST00000461654 GABPAQ06546 454 aa17.74■□□□□ 0.43
TMEM39A-203ENST00000461654 IFIT1BQ5T764 474 aaKnown RBP17.74■□□□□ 0.43
TMEM39A-203ENST00000461654 SGMS1Q86VZ5 419 aa17.74■□□□□ 0.43
TMEM39A-203ENST00000461654 SLC44A5Q8NCS7 719 aa17.74■□□□□ 0.43
TMEM39A-203ENST00000461654 CCDC17Q96LX7 622 aa17.74■□□□□ 0.43
TMEM39A-203ENST00000461654 LY9Q9HBG7 655 aa17.74■□□□□ 0.43
TMEM39A-203ENST00000461654 GPHNQ9NQX3 736 aaPredicted RBP17.74■□□□□ 0.43
TMEM39A-203ENST00000461654 SMC3Q9UQE7 1217 aa17.74■□□□□ 0.43
TMEM39A-203ENST00000461654 LARGE1O95461 756 aa17.73■□□□□ 0.43
TMEM39A-203ENST00000461654 GNRH1P01148 92 aa17.73■□□□□ 0.43
TMEM39A-203ENST00000461654 PDIA3P30101 505 aaKnown RBP17.73■□□□□ 0.43
TMEM39A-203ENST00000461654 PPP4R3BQ5MIZ7 849 aa17.73■□□□□ 0.43
TMEM39A-203ENST00000461654 NECAB1Q8N987 351 aa17.73■□□□□ 0.43
TMEM39A-203ENST00000461654 NEDD1Q8NHV4 660 aa17.73■□□□□ 0.43
TMEM39A-203ENST00000461654 GTF3C6Q969F1 213 aa17.73■□□□□ 0.43
TMEM39A-203ENST00000461654 TCP11L1Q9NUJ3 509 aa17.73■□□□□ 0.43
TMEM39A-203ENST00000461654 ADGRA2Q96PE1 1338 aa17.72■□□□□ 0.43
TMEM39A-203ENST00000461654 ZBTB43O43298 467 aa17.72■□□□□ 0.43
TMEM39A-203ENST00000461654 LACTBP83111 547 aaPredicted RBP17.72■□□□□ 0.43
TMEM39A-203ENST00000461654 CPLX2Q6PUV4 134 aaKnown RBP17.72■□□□□ 0.43
TMEM39A-203ENST00000461654 CATIPQ7Z7H3 387 aa17.72■□□□□ 0.43
TMEM39A-203ENST00000461654 DGKHQ86XP1 1220 aa17.72■□□□□ 0.43
TMEM39A-203ENST00000461654 ENAHQ8N8S7 591 aaPredicted RBP17.72■□□□□ 0.43
TMEM39A-203ENST00000461654 NKX2-3Q8TAU0 364 aa17.72■□□□□ 0.43
TMEM39A-203ENST00000461654 CHMP5Q9NZZ3 219 aa17.72■□□□□ 0.43
TMEM39A-203ENST00000461654 BRPF3Q9ULD4 1205 aa17.72■□□□□ 0.43
TMEM39A-203ENST00000461654 CIZ1Q9ULV3 898 aaPredicted RBP17.72■□□□□ 0.43
TMEM39A-203ENST00000461654 FAM196BA6NMK8 535 aa17.71■□□□□ 0.43
TMEM39A-203ENST00000461654 CPLX1O14810 134 aa17.71■□□□□ 0.43
TMEM39A-203ENST00000461654 CALM1P0DP23 149 aa17.71■□□□□ 0.43
TMEM39A-203ENST00000461654 CALM2P0DP24 149 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms