RNA–Protein interactions for RNA: ENST00000461469.5

LMBR1-214, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-214ENST00000461469 LBX2Q6XYB7 198 aa28.23■■■□□ 2.11
LMBR1-214ENST00000461469 IFNL3Q8IZI9 196 aa28.23■■■□□ 2.11
LMBR1-214ENST00000461469 SPICE1Q8N0Z3 855 aa28.23■■■□□ 2.11
LMBR1-214ENST00000461469 RABGAP1Q9Y3P9 1069 aa28.23■■■□□ 2.11
LMBR1-214ENST00000461469 PATL2C9JE40 543 aaKnown RBP28.22■■■□□ 2.11
LMBR1-214ENST00000461469 GJB1P08034 283 aa28.22■■■□□ 2.11
LMBR1-214ENST00000461469 AAMPQ13685 434 aa28.22■■■□□ 2.11
LMBR1-214ENST00000461469 GPR142Q7Z601 462 aa28.22■■■□□ 2.11
LMBR1-214ENST00000461469 GTF3C2Q8WUA4 911 aaPredicted RBP28.22■■■□□ 2.11
LMBR1-214ENST00000461469 GNAT2P19087 354 aa28.21■■■□□ 2.11
LMBR1-214ENST00000461469 GJA8P48165 433 aa28.21■■■□□ 2.11
LMBR1-214ENST00000461469 TDO2P48775 406 aa28.21■■■□□ 2.11
LMBR1-214ENST00000461469 TRIB2Q92519 343 aa28.21■■■□□ 2.11
LMBR1-214ENST00000461469 USP6NLQ92738 828 aa28.21■■■□□ 2.11
LMBR1-214ENST00000461469 VCPKMTQ9H867 229 aa28.21■■■□□ 2.11
LMBR1-214ENST00000461469 ARHGEF10LQ9HCE6 1279 aa28.21■■■□□ 2.11
LMBR1-214ENST00000461469 COL11A1P12107 1806 aaPredicted RBP28.2■■■□□ 2.11
LMBR1-214ENST00000461469 APPP05067 770 aa28.2■■■□□ 2.1
LMBR1-214ENST00000461469 CYP2B6P20813 491 aa28.2■■■□□ 2.1
LMBR1-214ENST00000461469 MORN1Q5T089 497 aa28.2■■■□□ 2.1
LMBR1-214ENST00000461469 RWDD1Q9H446 243 aaPredicted RBP28.2■■■□□ 2.1
LMBR1-214ENST00000461469 ZBTB47Q9UFB7 747 aaPredicted RBP28.2■■■□□ 2.1
LMBR1-214ENST00000461469 PRDM1O75626 825 aa28.19■■■□□ 2.1
LMBR1-214ENST00000461469 MAPK4P31152 587 aa28.19■■■□□ 2.1
LMBR1-214ENST00000461469 U2AF1L4Q8WU68 220 aaKnown RBP28.19■■■□□ 2.1
LMBR1-214ENST00000461469 TANGO6Q9C0B7 1094 aa28.19■■■□□ 2.1
LMBR1-214ENST00000461469 MYH4Q9Y623 1939 aa28.19■■■□□ 2.1
LMBR1-214ENST00000461469 ATP2B2Q01814 1243 aa28.18■■■□□ 2.1
LMBR1-214ENST00000461469 LRRFIP1Q32MZ4 808 aaKnown RBP28.18■■■□□ 2.1
LMBR1-214ENST00000461469 PRPF38BQ5VTL8 546 aaKnown RBP28.18■■■□□ 2.1
LMBR1-214ENST00000461469 EVI5LQ96CN4 794 aa28.18■■■□□ 2.1
LMBR1-214ENST00000461469 KANSL2Q9H9L4 492 aa28.18■■■□□ 2.1
LMBR1-214ENST00000461469 HMGCRP04035 888 aa28.17■■■□□ 2.1
LMBR1-214ENST00000461469 COG2Q14746 738 aa28.17■■■□□ 2.1
LMBR1-214ENST00000461469 CCL14Q16627 93 aa28.17■■■□□ 2.1
LMBR1-214ENST00000461469 VPS53Q5VIR6 699 aa28.17■■■□□ 2.1
LMBR1-214ENST00000461469 PLEKHH3Q7Z736 793 aa28.17■■■□□ 2.1
LMBR1-214ENST00000461469 UBE2Q1Q7Z7E8 422 aa28.17■■■□□ 2.1
LMBR1-214ENST00000461469 NUDT12Q9BQG2 462 aa28.17■■■□□ 2.1
LMBR1-214ENST00000461469 PAK6Q9NQU5 681 aaPredicted RBP28.17■■■□□ 2.1
LMBR1-214ENST00000461469 IGKV6D-41A0A0C4DH26 115 aa28.16■■■□□ 2.1
LMBR1-214ENST00000461469 NUCB1Q02818 461 aa28.16■■■□□ 2.1
LMBR1-214ENST00000461469 CHD1LQ86WJ1 897 aa28.16■■■□□ 2.1
LMBR1-214ENST00000461469 LPAR1Q92633 364 aa28.16■■■□□ 2.1
LMBR1-214ENST00000461469 ATG4CQ96DT6 458 aa28.16■■■□□ 2.1
LMBR1-214ENST00000461469 FAM227BQ96M60 508 aa28.16■■■□□ 2.1
LMBR1-214ENST00000461469 MKNK2Q9HBH9 465 aa28.16■■■□□ 2.1
LMBR1-214ENST00000461469 TACC3Q9Y6A5 838 aa28.16■■■□□ 2.1
LMBR1-214ENST00000461469 SGPL1O95470 568 aa28.15■■■□□ 2.1
LMBR1-214ENST00000461469 DSG3P32926 999 aa28.15■■■□□ 2.1
LMBR1-214ENST00000461469 IRX6P78412 446 aaPredicted RBP28.15■■■□□ 2.1
LMBR1-214ENST00000461469 PLEKHM2Q8IWE5 1019 aa28.15■■■□□ 2.1
LMBR1-214ENST00000461469 SOCS4Q8WXH5 440 aa28.15■■■□□ 2.1
LMBR1-214ENST00000461469 DEFB118Q96PH6 123 aa28.15■■■□□ 2.1
LMBR1-214ENST00000461469 FBXO28Q9NVF7 368 aa28.15■■■□□ 2.1
LMBR1-214ENST00000461469 A0A0D9SFI3 127 aa28.14■■■□□ 2.1
LMBR1-214ENST00000461469 NKX2-3Q8TAU0 364 aa28.14■■■□□ 2.1
LMBR1-214ENST00000461469 MOV10L1Q9BXT6 1211 aaKnown RBP28.14■■■□□ 2.1
LMBR1-214ENST00000461469 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.14■■■□□ 2.13e-6■■■■□ 19.8
LMBR1-214ENST00000461469 SH2D4AQ9H788 454 aa28.14■■■□□ 2.1
LMBR1-214ENST00000461469 INCENPQ9NQS7 918 aa28.14■■■□□ 2.1
LMBR1-214ENST00000461469 WDR46O15213 610 aaKnown RBP28.13■■■□□ 2.09
LMBR1-214ENST00000461469 FLOT1O75955 427 aa28.13■■■□□ 2.09
LMBR1-214ENST00000461469 XRCC5P13010 732 aaKnown RBP28.13■■■□□ 2.09
LMBR1-214ENST00000461469 PPARAQ07869 468 aa28.13■■■□□ 2.09
LMBR1-214ENST00000461469 CCAR1Q8IX12 1150 aaKnown RBP28.13■■■□□ 2.09
LMBR1-214ENST00000461469 NAPBQ9H115 298 aa28.13■■■□□ 2.09
LMBR1-214ENST00000461469 PTPREP23469 700 aa28.12■■■□□ 2.09
LMBR1-214ENST00000461469 CCNA1P78396 465 aa28.12■■■□□ 2.09
LMBR1-214ENST00000461469 MAP3K21Q5TCX8 1036 aa28.12■■■□□ 2.09
LMBR1-214ENST00000461469 WDR78Q5VTH9 848 aa28.12■■■□□ 2.09
LMBR1-214ENST00000461469 NUP88Q99567 741 aaPredicted RBP28.12■■■□□ 2.09
LMBR1-214ENST00000461469 HOXC10Q9NYD6 342 aa28.12■■■□□ 2.09
LMBR1-214ENST00000461469 FLRT1Q9NZU1 646 aa28.12■■■□□ 2.09
LMBR1-214ENST00000461469 MAP2K5Q13163 448 aa28.11■■■□□ 2.09
LMBR1-214ENST00000461469 FAM83BQ5T0W9 1011 aa28.11■■■□□ 2.09
LMBR1-214ENST00000461469 SAMD1Q6SPF0 538 aaPredicted RBP28.11■■■□□ 2.09
LMBR1-214ENST00000461469 NACAP1Q9BZK3 213 aa28.11■■■□□ 2.09
LMBR1-214ENST00000461469 SPATC1LQ9H0A9 340 aa28.11■■■□□ 2.09
LMBR1-214ENST00000461469 CRISPLD2Q9H0B8 497 aa28.11■■■□□ 2.09
LMBR1-214ENST00000461469 NYAP2Q9P242 653 aa28.11■■■□□ 2.09
LMBR1-214ENST00000461469 ZNF236Q9UL36 1845 aa28.11■■■□□ 2.09
LMBR1-214ENST00000461469 RGS2P41220 211 aa28.1■■■□□ 2.09
LMBR1-214ENST00000461469 CTDSPL2Q05D32 466 aa28.1■■■□□ 2.09
LMBR1-214ENST00000461469 NMIQ13287 307 aaPredicted RBP28.1■■■□□ 2.09
LMBR1-214ENST00000461469 FAM47AQ5JRC9 791 aa28.1■■■□□ 2.09
LMBR1-214ENST00000461469 ZNF589Q86UQ0 364 aaPredicted RBP28.1■■■□□ 2.09
LMBR1-214ENST00000461469 NPLOC4Q8TAT6 608 aa28.1■■■□□ 2.09
LMBR1-214ENST00000461469 CEP95Q96GE4 821 aa28.1■■■□□ 2.09
LMBR1-214ENST00000461469 APBA2Q99767 749 aa28.1■■■□□ 2.09
LMBR1-214ENST00000461469 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.1■■■□□ 2.09
LMBR1-214ENST00000461469 RAD21O60216 631 aa28.09■■■□□ 2.09
LMBR1-214ENST00000461469 PRKAR2AP13861 404 aaKnown RBP28.09■■■□□ 2.09
LMBR1-214ENST00000461469 GRB14Q14449 540 aa28.09■■■□□ 2.09
LMBR1-214ENST00000461469 ZNF444Q8N0Y2 327 aaPredicted RBP28.09■■■□□ 2.09
LMBR1-214ENST00000461469 OSBPL3Q9H4L5 887 aa28.09■■■□□ 2.09
LMBR1-214ENST00000461469 GOPCQ9HD26 462 aa28.09■■■□□ 2.09
LMBR1-214ENST00000461469 HELLSQ9NRZ9 838 aa28.09■■■□□ 2.09
LMBR1-214ENST00000461469 CLIP2Q9UDT6 1046 aa28.09■■■□□ 2.09
LMBR1-214ENST00000461469 ADAMTS5Q9UNA0 930 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms