RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 A0A1W2PRG0 241 aa18.2■□□□□ 0.5
COL16A1-206ENST00000461217 SLC15A5A6NIM6 579 aa18.2■□□□□ 0.5
COL16A1-206ENST00000461217 PTPREP23469 700 aa18.2■□□□□ 0.5
COL16A1-206ENST00000461217 LRRCC1Q9C099 1032 aa18.2■□□□□ 0.5
COL16A1-206ENST00000461217 ARHGEF10LQ9HCE6 1279 aa18.2■□□□□ 0.5
COL16A1-206ENST00000461217 MYH8P13535 1937 aa18.19■□□□□ 0.5
COL16A1-206ENST00000461217 A0A1W2PPC1 479 aa18.19■□□□□ 0.5
COL16A1-206ENST00000461217 SYN1P17600 705 aa18.19■□□□□ 0.5
COL16A1-206ENST00000461217 MNX1P50219 401 aaPredicted RBP18.19■□□□□ 0.5
COL16A1-206ENST00000461217 ATP2B2Q01814 1243 aa18.19■□□□□ 0.5
COL16A1-206ENST00000461217 ICA1Q05084 483 aa18.19■□□□□ 0.5
COL16A1-206ENST00000461217 COG2Q14746 738 aa18.19■□□□□ 0.5
COL16A1-206ENST00000461217 ZSCAN25Q6NSZ9 544 aa18.19■□□□□ 0.5
COL16A1-206ENST00000461217 CLEC10AQ8IUN9 316 aa18.19■□□□□ 0.5
COL16A1-206ENST00000461217 SH2D4AQ9H788 454 aa18.19■□□□□ 0.5
COL16A1-206ENST00000461217 SMARCA5O60264 1052 aaPredicted RBP18.18■□□□□ 0.5
COL16A1-206ENST00000461217 AKR1B1P15121 316 aa18.18■□□□□ 0.5
COL16A1-206ENST00000461217 CNGA1P29973 690 aa18.18■□□□□ 0.5
COL16A1-206ENST00000461217 GRB14Q14449 540 aa18.18■□□□□ 0.5
COL16A1-206ENST00000461217 SAMD1Q6SPF0 538 aaPredicted RBP18.18■□□□□ 0.5
COL16A1-206ENST00000461217 HOXC10Q9NYD6 342 aa18.18■□□□□ 0.5
COL16A1-206ENST00000461217 FLRT1Q9NZU1 646 aa18.18■□□□□ 0.5
COL16A1-206ENST00000461217 SLC4A4Q9Y6R1 1079 aa18.18■□□□□ 0.5
COL16A1-206ENST00000461217 PFASO15067 1338 aa18.18■□□□□ 0.5
COL16A1-206ENST00000461217 CYP2D7A0A087X1C5 515 aa18.17■□□□□ 0.5
COL16A1-206ENST00000461217 USP17L12C9JPN9 530 aa18.17■□□□□ 0.5
COL16A1-206ENST00000461217 USP17L21D6R901 530 aa18.17■□□□□ 0.5
COL16A1-206ENST00000461217 CHGBP05060 677 aa18.17■□□□□ 0.5
COL16A1-206ENST00000461217 PLS1Q14651 629 aa18.17■□□□□ 0.5
COL16A1-206ENST00000461217 UBE3CQ15386 1083 aa18.17■□□□□ 0.5
COL16A1-206ENST00000461217 C20orf194Q5TEA3 1177 aa18.17■□□□□ 0.5
COL16A1-206ENST00000461217 DPP9Q86TI2 863 aa18.17■□□□□ 0.5
COL16A1-206ENST00000461217 SPICE1Q8N0Z3 855 aa18.17■□□□□ 0.5
COL16A1-206ENST00000461217 LPAR1Q92633 364 aa18.17■□□□□ 0.5
COL16A1-206ENST00000461217 MOV10L1Q9BXT6 1211 aaKnown RBP18.17■□□□□ 0.5
COL16A1-206ENST00000461217 CEP290O15078 2479 aa18.16■□□□□ 0.5
COL16A1-206ENST00000461217 MYH7P12883 1935 aa18.16■□□□□ 0.5
COL16A1-206ENST00000461217 BAZ2AQ9UIF9 1905 aaKnown RBP18.16■□□□□ 0.5
COL16A1-206ENST00000461217 FLOT1O75955 427 aa18.16■□□□□ 0.5
COL16A1-206ENST00000461217 CDK8P49336 464 aa18.16■□□□□ 0.5
COL16A1-206ENST00000461217 AAMPQ13685 434 aa18.16■□□□□ 0.5
COL16A1-206ENST00000461217 C12orf60Q5U649 245 aa18.16■□□□□ 0.5
COL16A1-206ENST00000461217 LHX8Q68G74 356 aa18.16■□□□□ 0.5
COL16A1-206ENST00000461217 NPLOC4Q8TAT6 608 aa18.16■□□□□ 0.5
COL16A1-206ENST00000461217 CCDC17Q96LX7 622 aa18.16■□□□□ 0.5
COL16A1-206ENST00000461217 CRBNQ96SW2 442 aa18.16■□□□□ 0.5
COL16A1-206ENST00000461217 SPATC1LQ9H0A9 340 aa18.16■□□□□ 0.5
COL16A1-206ENST00000461217 A0A0G2JMZ2 1700 aa18.15■□□□□ 0.5
COL16A1-206ENST00000461217 TRIOBPQ9H2D6 2365 aa18.15■□□□□ 0.5
COL16A1-206ENST00000461217 FRMPD3Q5JV73 1810 aa18.15■□□□□ 0.5
COL16A1-206ENST00000461217 HOXC6P09630 235 aa18.15■□□□□ 0.5
COL16A1-206ENST00000461217 ADORA2AP29274 412 aa18.15■□□□□ 0.5
COL16A1-206ENST00000461217 CYP2C19P33261 490 aa18.15■□□□□ 0.5
COL16A1-206ENST00000461217 KIAA1755Q5JYT7 1200 aa18.15■□□□□ 0.5
COL16A1-206ENST00000461217 MB21D1Q8N884 522 aa18.15■□□□□ 0.5
COL16A1-206ENST00000461217 GDF15Q99988 308 aa18.15■□□□□ 0.5
COL16A1-206ENST00000461217 VCPKMTQ9H867 229 aa18.15■□□□□ 0.5
COL16A1-206ENST00000461217 DDX20Q9UHI6 824 aaKnown RBP18.15■□□□□ 0.5
COL16A1-206ENST00000461217 TMX2Q9Y320 296 aa18.15■□□□□ 0.5
COL16A1-206ENST00000461217 SMIM22K7EJ46 135 aa18.14■□□□□ 0.49
COL16A1-206ENST00000461217 WDR46O15213 610 aaKnown RBP18.14■□□□□ 0.49
COL16A1-206ENST00000461217 STRNO43815 780 aa18.14■□□□□ 0.49
COL16A1-206ENST00000461217 RAD21O60216 631 aa18.14■□□□□ 0.49
COL16A1-206ENST00000461217 MSCO60682 206 aa18.14■□□□□ 0.49
COL16A1-206ENST00000461217 COL6A1P12109 1028 aa18.14■□□□□ 0.49
COL16A1-206ENST00000461217 ERCC3P19447 782 aa18.14■□□□□ 0.49
COL16A1-206ENST00000461217 C16orf86Q6ZW13 317 aa18.14■□□□□ 0.49
COL16A1-206ENST00000461217 NCAPG2Q86XI2 1143 aa18.14■□□□□ 0.49
COL16A1-206ENST00000461217 SHCBP1Q8NEM2 672 aa18.14■□□□□ 0.49
COL16A1-206ENST00000461217 EXOC6Q8TAG9 804 aa18.14■□□□□ 0.49
COL16A1-206ENST00000461217 ATG4CQ96DT6 458 aa18.14■□□□□ 0.49
COL16A1-206ENST00000461217 GPATCH3Q96I76 525 aa18.14■□□□□ 0.49
COL16A1-206ENST00000461217 PUS7LQ9H0K6 701 aaKnown RBP18.14■□□□□ 0.49
COL16A1-206ENST00000461217 ECHDC1Q9NTX5 307 aa18.14■□□□□ 0.49
COL16A1-206ENST00000461217 ARPP21Q9UBL0 812 aaPredicted RBP18.14■□□□□ 0.49
COL16A1-206ENST00000461217 ZNF236Q9UL36 1845 aa18.14■□□□□ 0.49
COL16A1-206ENST00000461217 EEF2P13639 858 aaKnown RBP18.13■□□□□ 0.49
COL16A1-206ENST00000461217 DSG3P32926 999 aa18.13■□□□□ 0.49
COL16A1-206ENST00000461217 MAGEA10P43363 369 aaPredicted RBP18.13■□□□□ 0.49
COL16A1-206ENST00000461217 CTR9Q6PD62 1173 aa18.13■□□□□ 0.49
COL16A1-206ENST00000461217 SLC5A4Q9NY91 659 aa18.13■□□□□ 0.49
COL16A1-206ENST00000461217 SOX1O00570 391 aaPredicted RBP18.12■□□□□ 0.49
COL16A1-206ENST00000461217 BMP8BP34820 402 aa18.12■□□□□ 0.49
COL16A1-206ENST00000461217 LRRC26Q2I0M4 334 aa18.12■□□□□ 0.49
COL16A1-206ENST00000461217 SIAH1Q8IUQ4 282 aa18.12■□□□□ 0.49
COL16A1-206ENST00000461217 SENP6Q9GZR1 1112 aaPredicted RBP18.12■□□□□ 0.49
COL16A1-206ENST00000461217 MROH8Q9H579 483 aa18.12■□□□□ 0.49
COL16A1-206ENST00000461217 KANSL2Q9H9L4 492 aa18.12■□□□□ 0.49
COL16A1-206ENST00000461217 GOPCQ9HD26 462 aa18.12■□□□□ 0.49
COL16A1-206ENST00000461217 PPP4R2Q9NY27 417 aa18.12■□□□□ 0.49
COL16A1-206ENST00000461217 CYBAP13498 195 aa18.11■□□□□ 0.49
COL16A1-206ENST00000461217 STK11IPQ8N1F8 1099 aa18.11■□□□□ 0.49
COL16A1-206ENST00000461217 LRCH3Q96II8 777 aa18.11■□□□□ 0.49
COL16A1-206ENST00000461217 UBE2OQ9C0C9 1292 aaKnown RBP18.11■□□□□ 0.49
COL16A1-206ENST00000461217 RLFQ13129 1914 aa18.1■□□□□ 0.49
COL16A1-206ENST00000461217 MYCNP04198 464 aaPredicted RBP18.1■□□□□ 0.49
COL16A1-206ENST00000461217 TSHZ3Q63HK5 1081 aa18.1■□□□□ 0.49
COL16A1-206ENST00000461217 OLFML2BQ68BL8 750 aa18.1■□□□□ 0.49
COL16A1-206ENST00000461217 KBTBD3Q8NAB2 608 aa18.1■□□□□ 0.49
COL16A1-206ENST00000461217 TRPV1Q8NER1 839 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms