RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 CENPFP49454 3210 aa26.79■■□□□ 1.88
TRAF4-207ENST00000461195 PRDM1O75626 825 aa26.78■■□□□ 1.88
TRAF4-207ENST00000461195 SH3TC2Q8TF17 1288 aa26.78■■□□□ 1.88
TRAF4-207ENST00000461195 ZNF333Q96JL9 665 aa26.78■■□□□ 1.88
TRAF4-207ENST00000461195 DOCK3Q8IZD9 2030 aa26.77■■□□□ 1.88
TRAF4-207ENST00000461195 CCDC171Q6TFL3 1326 aa26.77■■□□□ 1.88
TRAF4-207ENST00000461195 ALX1Q15699 326 aa26.77■■□□□ 1.88
TRAF4-207ENST00000461195 KIAA1755Q5JYT7 1200 aa26.77■■□□□ 1.88
TRAF4-207ENST00000461195 PAGR1Q9BTK6 254 aa26.77■■□□□ 1.88
TRAF4-207ENST00000461195 HIP1O00291 1037 aa26.76■■□□□ 1.87
TRAF4-207ENST00000461195 PEX10O60683 326 aa26.76■■□□□ 1.87
TRAF4-207ENST00000461195 FLT3LGP49771 235 aa26.76■■□□□ 1.87
TRAF4-207ENST00000461195 MFAP1P55081 439 aaKnown RBP26.76■■□□□ 1.87
TRAF4-207ENST00000461195 ERVK-9P63128 1117 aa26.76■■□□□ 1.87
TRAF4-207ENST00000461195 ERVK-24P63145 666 aa26.76■■□□□ 1.87
TRAF4-207ENST00000461195 LBX2Q6XYB7 198 aa26.76■■□□□ 1.87
TRAF4-207ENST00000461195 ZNF589Q86UQ0 364 aaPredicted RBP26.76■■□□□ 1.87
TRAF4-207ENST00000461195 TANGO6Q9C0B7 1094 aa26.76■■□□□ 1.87
TRAF4-207ENST00000461195 DIAPH3Q9NSV4 1193 aa26.76■■□□□ 1.87
TRAF4-207ENST00000461195 RABGAP1Q9Y3P9 1069 aa26.76■■□□□ 1.87
TRAF4-207ENST00000461195 HSPD1P10809 573 aaKnown RBP26.75■■□□□ 1.87
TRAF4-207ENST00000461195 GRK4P32298 578 aa26.75■■□□□ 1.87
TRAF4-207ENST00000461195 POTEEQ6S8J3 1075 aa26.75■■□□□ 1.87
TRAF4-207ENST00000461195 SPICE1Q8N0Z3 855 aa26.75■■□□□ 1.87
TRAF4-207ENST00000461195 GOPCQ9HD26 462 aa26.75■■□□□ 1.87
TRAF4-207ENST00000461195 NYAP2Q9P242 653 aa26.75■■□□□ 1.87
TRAF4-207ENST00000461195 RBBP6Q7Z6E9 1792 aaKnown RBP26.74■■□□□ 1.87
TRAF4-207ENST00000461195 SPDYE16A6NNV3 312 aaPredicted RBP26.74■■□□□ 1.87
TRAF4-207ENST00000461195 IRF5Q13568 498 aa26.74■■□□□ 1.87
TRAF4-207ENST00000461195 COG2Q14746 738 aa26.74■■□□□ 1.87
TRAF4-207ENST00000461195 Q3C1V9 767 aa26.74■■□□□ 1.87
TRAF4-207ENST00000461195 TTC22Q5TAA0 569 aa26.74■■□□□ 1.87
TRAF4-207ENST00000461195 SLAIN1Q8ND83 568 aa26.74■■□□□ 1.87
TRAF4-207ENST00000461195 HOXC10Q9NYD6 342 aa26.74■■□□□ 1.87
TRAF4-207ENST00000461195 ANAPC4Q9UJX5 808 aa26.74■■□□□ 1.87
TRAF4-207ENST00000461195 MYH4Q9Y623 1939 aa26.73■■□□□ 1.87
TRAF4-207ENST00000461195 IGKV6D-41A0A0C4DH26 115 aa26.73■■□□□ 1.87
TRAF4-207ENST00000461195 WDR46O15213 610 aaKnown RBP26.73■■□□□ 1.87
TRAF4-207ENST00000461195 FGAP02671 866 aa26.73■■□□□ 1.87
TRAF4-207ENST00000461195 CTDSPL2Q05D32 466 aa26.73■■□□□ 1.87
TRAF4-207ENST00000461195 CWC27Q6UX04 472 aaKnown RBP26.73■■□□□ 1.87
TRAF4-207ENST00000461195 CCAR1Q8IX12 1150 aaKnown RBP26.73■■□□□ 1.87
TRAF4-207ENST00000461195 RLFQ13129 1914 aa26.73■■□□□ 1.87
TRAF4-207ENST00000461195 PLIN4Q96Q06 1357 aa26.72■■□□□ 1.87
TRAF4-207ENST00000461195 ZMYM6O95789 1325 aa26.72■■□□□ 1.87
TRAF4-207ENST00000461195 ADCY3O60266 1144 aa26.72■■□□□ 1.87
TRAF4-207ENST00000461195 CNMDO75829 334 aa26.72■■□□□ 1.87
TRAF4-207ENST00000461195 TSPY3P0CV98 308 aa26.72■■□□□ 1.87
TRAF4-207ENST00000461195 TSPY8P0CW00 308 aa26.72■■□□□ 1.87
TRAF4-207ENST00000461195 MAPK4P31152 587 aa26.72■■□□□ 1.87
TRAF4-207ENST00000461195 NEDD1Q8NHV4 660 aa26.72■■□□□ 1.87
TRAF4-207ENST00000461195 TMEM106CQ9BVX2 250 aa26.72■■□□□ 1.87
TRAF4-207ENST00000461195 KIAA0100Q14667 2235 aaKnown RBP26.71■■□□□ 1.87
TRAF4-207ENST00000461195 MKI67P46013 3256 aaKnown RBP26.71■■□□□ 1.87
TRAF4-207ENST00000461195 POTEFA5A3E0 1075 aa26.71■■□□□ 1.87
TRAF4-207ENST00000461195 GSPT1P15170 499 aaKnown RBP26.71■■□□□ 1.87
TRAF4-207ENST00000461195 CCNA1P78396 465 aa26.71■■□□□ 1.87
TRAF4-207ENST00000461195 TFAP4Q01664 338 aa26.71■■□□□ 1.87
TRAF4-207ENST00000461195 CEP95Q96GE4 821 aa26.71■■□□□ 1.87
TRAF4-207ENST00000461195 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.71■■□□□ 1.87
TRAF4-207ENST00000461195 PARP14Q460N5 1801 aa26.7■■□□□ 1.87
TRAF4-207ENST00000461195 RAD21O60216 631 aa26.7■■□□□ 1.86
TRAF4-207ENST00000461195 FLOT1O75955 427 aa26.7■■□□□ 1.86
TRAF4-207ENST00000461195 MYCP01106 439 aaPredicted RBP26.7■■□□□ 1.86
TRAF4-207ENST00000461195 FAM47AQ5JRC9 791 aa26.7■■□□□ 1.86
TRAF4-207ENST00000461195 PXYLP1Q8TE99 480 aa26.7■■□□□ 1.86
TRAF4-207ENST00000461195 PORCNQ9H237 461 aa26.7■■□□□ 1.86
TRAF4-207ENST00000461195 MTMR4Q9NYA4 1195 aa26.7■■□□□ 1.86
TRAF4-207ENST00000461195 BTBD7Q9P203 1132 aa26.7■■□□□ 1.86
TRAF4-207ENST00000461195 BIN2Q9UBW5 565 aaPredicted RBP26.7■■□□□ 1.86
TRAF4-207ENST00000461195 CLIP2Q9UDT6 1046 aa26.7■■□□□ 1.86
TRAF4-207ENST00000461195 GJD2Q9UKL4 321 aa26.7■■□□□ 1.86
TRAF4-207ENST00000461195 PLXNB2O15031 1838 aa26.69■■□□□ 1.86
TRAF4-207ENST00000461195 A0A0G2JMZ2 1700 aa26.69■■□□□ 1.86
TRAF4-207ENST00000461195 DSG3P32926 999 aa26.69■■□□□ 1.86
TRAF4-207ENST00000461195 TTLL1O95922 423 aa26.68■■□□□ 1.86
TRAF4-207ENST00000461195 ELNP15502 786 aa26.68■■□□□ 1.86
TRAF4-207ENST00000461195 UBXN2AP68543 259 aa26.68■■□□□ 1.86
TRAF4-207ENST00000461195 MB21D1Q8N884 522 aa26.68■■□□□ 1.86
TRAF4-207ENST00000461195 MKL1Q969V6 931 aa26.68■■□□□ 1.86
TRAF4-207ENST00000461195 CWC22Q9HCG8 908 aaKnown RBP26.68■■□□□ 1.86
TRAF4-207ENST00000461195 INCENPQ9NQS7 918 aa26.68■■□□□ 1.86
TRAF4-207ENST00000461195 SYNPO2Q9UMS6 1093 aa26.68■■□□□ 1.86
TRAF4-207ENST00000461195 TSPY2A6NKD2 308 aa26.67■■□□□ 1.86
TRAF4-207ENST00000461195 F5H6K3 240 aa26.67■■□□□ 1.86
TRAF4-207ENST00000461195 ORC4O43929 436 aa26.67■■□□□ 1.86
TRAF4-207ENST00000461195 KLRC3Q07444 240 aa26.67■■□□□ 1.86
TRAF4-207ENST00000461195 GPR142Q7Z601 462 aa26.67■■□□□ 1.86
TRAF4-207ENST00000461195 PLEKHH3Q7Z736 793 aa26.67■■□□□ 1.86
TRAF4-207ENST00000461195 SOCS4Q8WXH5 440 aa26.67■■□□□ 1.86
TRAF4-207ENST00000461195 NUDT12Q9BQG2 462 aa26.67■■□□□ 1.86
TRAF4-207ENST00000461195 FGRP09769 529 aa26.66■■□□□ 1.86
TRAF4-207ENST00000461195 MTFR1Q15390 333 aa26.66■■□□□ 1.86
TRAF4-207ENST00000461195 PPP4R3BQ5MIZ7 849 aa26.66■■□□□ 1.86
TRAF4-207ENST00000461195 FAM83BQ5T0W9 1011 aa26.66■■□□□ 1.86
TRAF4-207ENST00000461195 TACC3Q9Y6A5 838 aa26.66■■□□□ 1.86
TRAF4-207ENST00000461195 RANBP6O60518 1105 aaKnown RBP26.65■■□□□ 1.86
TRAF4-207ENST00000461195 NDUFB10O96000 172 aa26.65■■□□□ 1.86
TRAF4-207ENST00000461195 SAMD1Q6SPF0 538 aaPredicted RBP26.65■■□□□ 1.86
TRAF4-207ENST00000461195 ATG4CQ96DT6 458 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms