RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 TNFAIP1Q13829 316 aa19.57■□□□□ 0.72
NELFCD-201ENST00000460601 DLK2Q6UY11 383 aa19.57■□□□□ 0.72
NELFCD-201ENST00000460601 ALG1Q9BT22 464 aa19.57■□□□□ 0.72
NELFCD-201ENST00000460601 SLC35G1Q2M3R5 365 aa19.57■□□□□ 0.72
NELFCD-201ENST00000460601 SIAH1Q8IUQ4 282 aa19.57■□□□□ 0.72
NELFCD-201ENST00000460601 C8orf76Q96K31 380 aa19.57■□□□□ 0.72
NELFCD-201ENST00000460601 GBP4Q96PP9 640 aa19.57■□□□□ 0.72
NELFCD-201ENST00000460601 GDPD2Q9HCC8 539 aa19.57■□□□□ 0.72
NELFCD-201ENST00000460601 USP17L5A8MUK1 530 aa19.56■□□□□ 0.72
NELFCD-201ENST00000460601 EEF2P13639 858 aaKnown RBP19.56■□□□□ 0.72
NELFCD-201ENST00000460601 NBPF12Q5TAG4 269 aaPredicted RBP19.56■□□□□ 0.72
NELFCD-201ENST00000460601 CLEC17AQ6ZS10 378 aa19.56■□□□□ 0.72
NELFCD-201ENST00000460601 RBM28Q9NW13 759 aaKnown RBP19.56■□□□□ 0.72
NELFCD-201ENST00000460601 CNTNAP5Q8WYK1 1306 aa19.56■□□□□ 0.72
NELFCD-201ENST00000460601 VEGFAP15692 232 aaPredicted RBP19.55■□□□□ 0.72
NELFCD-201ENST00000460601 GRM4Q14833 912 aa19.55■□□□□ 0.72
NELFCD-201ENST00000460601 KIF3AQ9Y496 699 aa19.55■□□□□ 0.72
NELFCD-201ENST00000460601 V9GY48 417 aaPredicted RBP19.55■□□□□ 0.72
NELFCD-201ENST00000460601 FRMPD2Q68DX3 1309 aaPredicted RBP19.55■□□□□ 0.72
NELFCD-201ENST00000460601 MYH4Q9Y623 1939 aa19.55■□□□□ 0.72
NELFCD-201ENST00000460601 RAD21O60216 631 aa19.55■□□□□ 0.72
NELFCD-201ENST00000460601 PDHBP11177 359 aa19.55■□□□□ 0.72
NELFCD-201ENST00000460601 LMOD1P29536 600 aaPredicted RBP19.55■□□□□ 0.72
NELFCD-201ENST00000460601 ICA1Q05084 483 aa19.55■□□□□ 0.72
NELFCD-201ENST00000460601 PPP2R5BQ15173 497 aa19.55■□□□□ 0.72
NELFCD-201ENST00000460601 TMEM179Q6ZVK1 233 aa19.55■□□□□ 0.72
NELFCD-201ENST00000460601 TRIM22Q8IYM9 498 aa19.55■□□□□ 0.72
NELFCD-201ENST00000460601 FBXO18Q8NFZ0 1043 aa19.55■□□□□ 0.72
NELFCD-201ENST00000460601 SHISA4Q96DD7 197 aa19.55■□□□□ 0.72
NELFCD-201ENST00000460601 STK36Q9NRP7 1315 aa19.54■□□□□ 0.72
NELFCD-201ENST00000460601 DNM1Q05193 864 aaKnown RBP19.54■□□□□ 0.72
NELFCD-201ENST00000460601 PKN1Q16512 942 aa19.54■□□□□ 0.72
NELFCD-201ENST00000460601 CCDC84Q86UT8 332 aaPredicted RBP19.54■□□□□ 0.72
NELFCD-201ENST00000460601 CYTH3O43739 400 aa19.54■□□□□ 0.72
NELFCD-201ENST00000460601 GRIN3BO60391 1043 aa19.54■□□□□ 0.72
NELFCD-201ENST00000460601 KIF5BP33176 963 aa19.54■□□□□ 0.72
NELFCD-201ENST00000460601 KANSL2Q9H9L4 492 aa19.54■□□□□ 0.72
NELFCD-201ENST00000460601 TCHHQ07283 1943 aa19.53■□□□□ 0.72
NELFCD-201ENST00000460601 PALM3A6NDB9 673 aaPredicted RBP19.53■□□□□ 0.72
NELFCD-201ENST00000460601 RESTQ13127 1097 aa19.53■□□□□ 0.72
NELFCD-201ENST00000460601 DPY19L2Q6NUT2 758 aa19.53■□□□□ 0.72
NELFCD-201ENST00000460601 RNF26Q9BY78 433 aaPredicted RBP19.53■□□□□ 0.72
NELFCD-201ENST00000460601 ADARB2Q9NS39 739 aaKnown RBP19.53■□□□□ 0.72
NELFCD-201ENST00000460601 CNPY2Q9Y2B0 182 aa19.53■□□□□ 0.72
NELFCD-201ENST00000460601 TBC1D12O60347 775 aa19.52■□□□□ 0.72
NELFCD-201ENST00000460601 DEXIO95424 95 aa19.52■□□□□ 0.72
NELFCD-201ENST00000460601 ECE1P42892 770 aa19.52■□□□□ 0.72
NELFCD-201ENST00000460601 KCNJ14Q9UNX9 436 aa19.52■□□□□ 0.72
NELFCD-201ENST00000460601 POLR2AP24928 1970 aaKnown RBP19.52■□□□□ 0.72
NELFCD-201ENST00000460601 A0A1W2PRG0 241 aa19.52■□□□□ 0.72
NELFCD-201ENST00000460601 PHF20L1A8MW92 1017 aa19.52■□□□□ 0.72
NELFCD-201ENST00000460601 KIF28PB7ZC32 967 aa19.52■□□□□ 0.72
NELFCD-201ENST00000460601 KLRF2D3W0D1 207 aa19.52■□□□□ 0.72
NELFCD-201ENST00000460601 PARP1P09874 1014 aaKnown RBP19.52■□□□□ 0.72
NELFCD-201ENST00000460601 KRT40Q6A162 431 aa19.52■□□□□ 0.72
NELFCD-201ENST00000460601 MAP3K14Q99558 947 aa19.52■□□□□ 0.72
NELFCD-201ENST00000460601 UBA5Q9GZZ9 404 aa19.52■□□□□ 0.72
NELFCD-201ENST00000460601 ZBTB21Q9ULJ3 1066 aa19.52■□□□□ 0.72
NELFCD-201ENST00000460601 MYH6P13533 1939 aa19.51■□□□□ 0.71
NELFCD-201ENST00000460601 NCLP19338 710 aaKnown RBP19.51■□□□□ 0.71
NELFCD-201ENST00000460601 MAP3K10Q02779 954 aa19.51■□□□□ 0.71
NELFCD-201ENST00000460601 CABP5Q9NP86 173 aa19.51■□□□□ 0.71
NELFCD-201ENST00000460601 VPS54Q9P1Q0 977 aa19.51■□□□□ 0.71
NELFCD-201ENST00000460601 PRPF3O43395 683 aaKnown RBP19.51■□□□□ 0.71
NELFCD-201ENST00000460601 CAP2P40123 477 aa19.51■□□□□ 0.71
NELFCD-201ENST00000460601 KCTD1Q719H9 257 aa19.51■□□□□ 0.71
NELFCD-201ENST00000460601 APOBEC3FQ8IUX4 373 aaKnown RBP19.51■□□□□ 0.71
NELFCD-201ENST00000460601 GLIS2Q9BZE0 524 aaPredicted RBP19.51■□□□□ 0.71
NELFCD-201ENST00000460601 GLTPD2A6NH11 291 aa19.5■□□□□ 0.71
NELFCD-201ENST00000460601 SNHG28P0DPA3 235 aa19.5■□□□□ 0.71
NELFCD-201ENST00000460601 AKAP17AQ02040 695 aaKnown RBP19.5■□□□□ 0.71
NELFCD-201ENST00000460601 ACER1Q8TDN7 264 aa19.5■□□□□ 0.71
NELFCD-201ENST00000460601 FTOQ9C0B1 505 aaKnown RBP eCLIP19.5■□□□□ 0.71
NELFCD-201ENST00000460601 GPCPD1Q9NPB8 672 aa19.5■□□□□ 0.71
NELFCD-201ENST00000460601 NYAP2Q9P242 653 aa19.5■□□□□ 0.71
NELFCD-201ENST00000460601 TTBK2Q6IQ55 1244 aa19.49■□□□□ 0.71
NELFCD-201ENST00000460601 L3MBTL3Q96JM7 780 aaPredicted RBP19.49■□□□□ 0.71
NELFCD-201ENST00000460601 NUP88Q99567 741 aaPredicted RBP19.49■□□□□ 0.71
NELFCD-201ENST00000460601 ADM5C9JUS6 153 aa19.49■□□□□ 0.71
NELFCD-201ENST00000460601 FIBPO43427 364 aa19.49■□□□□ 0.71
NELFCD-201ENST00000460601 PRPF40AO75400 957 aaKnown RBP19.49■□□□□ 0.71
NELFCD-201ENST00000460601 PDIA4P13667 645 aaKnown RBP19.49■□□□□ 0.71
NELFCD-201ENST00000460601 SPICE1Q8N0Z3 855 aa19.49■□□□□ 0.71
NELFCD-201ENST00000460601 GPKOWQ92917 476 aaPredicted RBP eCLIP19.49■□□□□ 0.715e-8■□□□□ 10.7
NELFCD-201ENST00000460601 VAT1LQ9HCJ6 419 aa19.49■□□□□ 0.71
NELFCD-201ENST00000460601 TFIP11Q9UBB9 837 aaKnown RBP19.49■□□□□ 0.71
NELFCD-201ENST00000460601 ISY1Q9ULR0 285 aaKnown RBP19.49■□□□□ 0.71
NELFCD-201ENST00000460601 SSC5DA1L4H1 1573 aa19.49■□□□□ 0.71
NELFCD-201ENST00000460601 INPP5BP32019 993 aa19.48■□□□□ 0.71
NELFCD-201ENST00000460601 SLC16A2P36021 539 aa19.48■□□□□ 0.71
NELFCD-201ENST00000460601 KIF23Q02241 960 aaPredicted RBP19.48■□□□□ 0.71
NELFCD-201ENST00000460601 PRKG1Q13976 671 aa19.48■□□□□ 0.71
NELFCD-201ENST00000460601 TPRNQ4KMQ1 711 aa19.48■□□□□ 0.71
NELFCD-201ENST00000460601 HOMER1Q86YM7 354 aa19.48■□□□□ 0.71
NELFCD-201ENST00000460601 MKL1Q969V6 931 aa19.48■□□□□ 0.71
NELFCD-201ENST00000460601 DDX11L8A8MPP1 907 aa19.48■□□□□ 0.71
NELFCD-201ENST00000460601 EPHX2P34913 555 aa19.48■□□□□ 0.71
NELFCD-201ENST00000460601 ZNF543Q08ER8 600 aa19.48■□□□□ 0.71
NELFCD-201ENST00000460601 ZYXQ15942 572 aaKnown RBP19.48■□□□□ 0.71
NELFCD-201ENST00000460601 CCDC96Q2M329 555 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms