RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 MOGSQ13724 837 aa26.5■■□□□ 1.83
C9orf3-209ENST00000460573 KIF22Q14807 665 aa26.5■■□□□ 1.83
C9orf3-209ENST00000460573 OTOP1Q7RTM1 612 aa26.5■■□□□ 1.83
C9orf3-209ENST00000460573 SIAH1Q8IUQ4 282 aa26.5■■□□□ 1.83
C9orf3-209ENST00000460573 NCOA7Q8NI08 942 aa26.5■■□□□ 1.83
C9orf3-209ENST00000460573 ACER1Q8TDN7 264 aa26.5■■□□□ 1.83
C9orf3-209ENST00000460573 MKL1Q969V6 931 aa26.5■■□□□ 1.83
C9orf3-209ENST00000460573 CEP95Q96GE4 821 aa26.5■■□□□ 1.83
C9orf3-209ENST00000460573 C12orf42Q96LP6 360 aa26.5■■□□□ 1.83
C9orf3-209ENST00000460573 KDM4AO75164 1064 aa26.49■■□□□ 1.83
C9orf3-209ENST00000460573 ZKSCAN1P17029 563 aaPredicted RBP26.49■■□□□ 1.83
C9orf3-209ENST00000460573 GADL1Q6ZQY3 521 aa26.49■■□□□ 1.83
C9orf3-209ENST00000460573 IQCA1Q86XH1 822 aa26.49■■□□□ 1.83
C9orf3-209ENST00000460573 SLC45A1Q9Y2W3 748 aa26.49■■□□□ 1.83
C9orf3-209ENST00000460573 PTPRFP10586 1907 aa26.48■■□□□ 1.83
C9orf3-209ENST00000460573 A0A1W2PRG0 241 aa26.48■■□□□ 1.83
C9orf3-209ENST00000460573 B4E1Z4 1266 aa26.48■■□□□ 1.83
C9orf3-209ENST00000460573 BTBD19C9JJ37 291 aa26.48■■□□□ 1.83
C9orf3-209ENST00000460573 ATP2B2Q01814 1243 aa26.48■■□□□ 1.83
C9orf3-209ENST00000460573 PABPC4Q13310 644 aaKnown RBP eCLIP26.48■■□□□ 1.83
C9orf3-209ENST00000460573 TSGA10IPQ3SY00 556 aa26.48■■□□□ 1.83
C9orf3-209ENST00000460573 RALYLQ86SE5 291 aaKnown RBP26.48■■□□□ 1.83
C9orf3-209ENST00000460573 IL17RBQ9NRM6 502 aa26.48■■□□□ 1.83
C9orf3-209ENST00000460573 CLIP2Q9UDT6 1046 aa26.48■■□□□ 1.83
C9orf3-209ENST00000460573 AGTPBP1Q9UPW5 1226 aa26.48■■□□□ 1.83
C9orf3-209ENST00000460573 HSPA4P34932 840 aa26.47■■□□□ 1.83
C9orf3-209ENST00000460573 CLEC10AQ8IUN9 316 aa26.47■■□□□ 1.83
C9orf3-209ENST00000460573 TTC14Q96N46 770 aa26.47■■□□□ 1.83
C9orf3-209ENST00000460573 USP26Q9BXU7 913 aa26.47■■□□□ 1.83
C9orf3-209ENST00000460573 EMILIN3Q9NT22 766 aa26.47■■□□□ 1.83
C9orf3-209ENST00000460573 NOVP48745 357 aa26.46■■□□□ 1.83
C9orf3-209ENST00000460573 KRT32Q14532 448 aa26.46■■□□□ 1.83
C9orf3-209ENST00000460573 GPAT2Q6NUI2 795 aa26.46■■□□□ 1.83
C9orf3-209ENST00000460573 LPAR1Q92633 364 aa26.46■■□□□ 1.83
C9orf3-209ENST00000460573 KCNB2Q92953 911 aa26.46■■□□□ 1.83
C9orf3-209ENST00000460573 VCPKMTQ9H867 229 aa26.46■■□□□ 1.83
C9orf3-209ENST00000460573 GOPCQ9HD26 462 aa26.46■■□□□ 1.83
C9orf3-209ENST00000460573 ZSWIM5Q9P217 1185 aa26.46■■□□□ 1.83
C9orf3-209ENST00000460573 MCCP23508 829 aa26.45■■□□□ 1.82
C9orf3-209ENST00000460573 ZYXQ15942 572 aaKnown RBP26.45■■□□□ 1.82
C9orf3-209ENST00000460573 STOX1Q6ZVD7 989 aa26.45■■□□□ 1.82
C9orf3-209ENST00000460573 STX8Q9UNK0 236 aa26.45■■□□□ 1.82
C9orf3-209ENST00000460573 LOC285556D6RIA3 1793 aa26.45■■□□□ 1.82
C9orf3-209ENST00000460573 PDHXO00330 501 aa26.44■■□□□ 1.82
C9orf3-209ENST00000460573 DGKHQ86XP1 1220 aa26.44■■□□□ 1.82
C9orf3-209ENST00000460573 PNMA3Q9UL41 463 aa26.44■■□□□ 1.82
C9orf3-209ENST00000460573 TAF6LQ9Y6J9 622 aa26.44■■□□□ 1.82
C9orf3-209ENST00000460573 NMT2O60551 498 aa26.43■■□□□ 1.82
C9orf3-209ENST00000460573 TLR2O60603 784 aa26.43■■□□□ 1.82
C9orf3-209ENST00000460573 HOXA7P31268 230 aaPredicted RBP26.43■■□□□ 1.82
C9orf3-209ENST00000460573 C8orf34Q49A92 452 aa26.43■■□□□ 1.82
C9orf3-209ENST00000460573 ZSCAN10Q96SZ4 725 aaPredicted RBP26.43■■□□□ 1.82
C9orf3-209ENST00000460573 UBAC1Q9BSL1 405 aa26.43■■□□□ 1.82
C9orf3-209ENST00000460573 MTA3Q9BTC8 594 aa26.43■■□□□ 1.82
C9orf3-209ENST00000460573 PTPN22Q9Y2R2 807 aa26.43■■□□□ 1.82
C9orf3-209ENST00000460573 TREML2Q5T2D2 321 aa26.42■■□□□ 1.82
C9orf3-209ENST00000460573 GMCL1P1Q8NEA9 526 aa26.42■■□□□ 1.82
C9orf3-209ENST00000460573 TOP1P11387 765 aaKnown RBP26.41■■□□□ 1.82
C9orf3-209ENST00000460573 VCAM1P19320 739 aa26.41■■□□□ 1.82
C9orf3-209ENST00000460573 OSBPP22059 807 aa26.41■■□□□ 1.82
C9orf3-209ENST00000460573 SART3Q15020 963 aaKnown RBP26.41■■□□□ 1.82
C9orf3-209ENST00000460573 MB21D2Q8IYB1 491 aaPredicted RBP26.41■■□□□ 1.82
C9orf3-209ENST00000460573 RASEFQ8IZ41 740 aa26.41■■□□□ 1.82
C9orf3-209ENST00000460573 NKX2-3Q8TAU0 364 aa26.41■■□□□ 1.82
C9orf3-209ENST00000460573 ANKS1AQ92625 1134 aa26.41■■□□□ 1.82
C9orf3-209ENST00000460573 PARK7Q99497 189 aaKnown RBP26.41■■□□□ 1.82
C9orf3-209ENST00000460573 USP17L15C9J2P7 530 aa26.4■■□□□ 1.82
C9orf3-209ENST00000460573 USP17L13C9JLJ4 530 aa26.4■■□□□ 1.82
C9orf3-209ENST00000460573 USP17L11C9JVI0 530 aa26.4■■□□□ 1.82
C9orf3-209ENST00000460573 USP17L18D6R9N7 530 aa26.4■■□□□ 1.82
C9orf3-209ENST00000460573 USP17L22D6RA61 530 aa26.4■■□□□ 1.82
C9orf3-209ENST00000460573 USP17L17D6RBQ6 530 aa26.4■■□□□ 1.82
C9orf3-209ENST00000460573 USP17L19D6RCP7 530 aa26.4■■□□□ 1.82
C9orf3-209ENST00000460573 USP17L20D6RJB6 530 aa26.4■■□□□ 1.82
C9orf3-209ENST00000460573 F5H6K3 240 aa26.4■■□□□ 1.82
C9orf3-209ENST00000460573 WDR46O15213 610 aaKnown RBP26.4■■□□□ 1.82
C9orf3-209ENST00000460573 ECM2O94769 699 aaPredicted RBP26.4■■□□□ 1.82
C9orf3-209ENST00000460573 MCM5P33992 734 aa26.4■■□□□ 1.82
C9orf3-209ENST00000460573 KLRC3Q07444 240 aa26.4■■□□□ 1.82
C9orf3-209ENST00000460573 USP17L24Q0WX57 530 aa26.4■■□□□ 1.82
C9orf3-209ENST00000460573 CYB5R4Q7L1T6 521 aa26.4■■□□□ 1.82
C9orf3-209ENST00000460573 NEK1Q96PY6 1258 aa26.4■■□□□ 1.82
C9orf3-209ENST00000460573 ZKSCAN3Q9BRR0 538 aa26.4■■□□□ 1.82
C9orf3-209ENST00000460573 ERICH2A1L162 156 aa26.39■■□□□ 1.82
C9orf3-209ENST00000460573 HMGB1P09429 215 aaKnown RBP26.39■■□□□ 1.82
C9orf3-209ENST00000460573 RCSD1Q6JBY9 416 aa26.39■■□□□ 1.82
C9orf3-209ENST00000460573 TMEM47Q9BQJ4 181 aa26.39■■□□□ 1.82
C9orf3-209ENST00000460573 MYH4Q9Y623 1939 aa26.39■■□□□ 1.81
C9orf3-209ENST00000460573 TNKSO95271 1327 aa26.39■■□□□ 1.81
C9orf3-209ENST00000460573 IRX3P78415 501 aaPredicted RBP26.38■■□□□ 1.81
C9orf3-209ENST00000460573 CATSPERGQ6ZRH7 1159 aa26.38■■□□□ 1.81
C9orf3-209ENST00000460573 NBPF11Q86T75 865 aa26.38■■□□□ 1.81
C9orf3-209ENST00000460573 RPAP3Q9H6T3 665 aaPredicted RBP26.38■■□□□ 1.81
C9orf3-209ENST00000460573 CPA4Q9UI42 421 aa26.38■■□□□ 1.81
C9orf3-209ENST00000460573 SNX14Q9Y5W7 946 aa26.38■■□□□ 1.81
C9orf3-209ENST00000460573 RAD21O60216 631 aa26.37■■□□□ 1.81
C9orf3-209ENST00000460573 PSMA5P28066 241 aa26.37■■□□□ 1.81
C9orf3-209ENST00000460573 SLC9C1Q4G0N8 1177 aa26.37■■□□□ 1.81
C9orf3-209ENST00000460573 KIAA1755Q5JYT7 1200 aa26.37■■□□□ 1.81
C9orf3-209ENST00000460573 SPICE1Q8N0Z3 855 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms