RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 ZFYP08048 801 aaPredicted RBP18.09■□□□□ 0.49
CMTM3-203ENST00000460097 CERS3Q8IU89 383 aa18.09■□□□□ 0.49
CMTM3-203ENST00000460097 CDCA5Q96FF9 252 aa18.09■□□□□ 0.49
CMTM3-203ENST00000460097 NEK1Q96PY6 1258 aa18.09■□□□□ 0.49
CMTM3-203ENST00000460097 IDI2Q9BXS1 227 aa18.09■□□□□ 0.49
CMTM3-203ENST00000460097 DYNLL1P63167 89 aaKnown RBP18.08■□□□□ 0.48
CMTM3-203ENST00000460097 NFIAQ12857 509 aa18.08■□□□□ 0.48
CMTM3-203ENST00000460097 SH3RF3Q8TEJ3 882 aaPredicted RBP18.08■□□□□ 0.48
CMTM3-203ENST00000460097 BBXQ8WY36 941 aaPredicted RBP18.08■□□□□ 0.48
CMTM3-203ENST00000460097 ZNF408Q9H9D4 720 aa18.08■□□□□ 0.48
CMTM3-203ENST00000460097 ARGLU1Q9NWB6 273 aaPredicted RBP18.08■□□□□ 0.48
CMTM3-203ENST00000460097 FHOD1Q9Y613 1164 aa18.08■□□□□ 0.48
CMTM3-203ENST00000460097 MAST2Q6P0Q8 1798 aa18.08■□□□□ 0.48
CMTM3-203ENST00000460097 MAGEB6P1A0A0J9YX57 407 aa18.07■□□□□ 0.48
CMTM3-203ENST00000460097 RNF113AO15541 343 aaKnown RBP18.07■□□□□ 0.48
CMTM3-203ENST00000460097 WDHD1O75717 1129 aaPredicted RBP18.07■□□□□ 0.48
CMTM3-203ENST00000460097 ZRANB2O95218 330 aaKnown RBP eCLIP18.07■□□□□ 0.48
CMTM3-203ENST00000460097 CELF2O95319 508 aaKnown RBP18.07■□□□□ 0.48
CMTM3-203ENST00000460097 CHGBP05060 677 aa18.07■□□□□ 0.48
CMTM3-203ENST00000460097 APLP1P51693 650 aa18.07■□□□□ 0.48
CMTM3-203ENST00000460097 E4F1Q66K89 784 aaPredicted RBP18.07■□□□□ 0.48
CMTM3-203ENST00000460097 TEX11Q8IYF3 940 aa18.07■□□□□ 0.48
CMTM3-203ENST00000460097 FAM151AQ8WW52 585 aa18.07■□□□□ 0.48
CMTM3-203ENST00000460097 PPP1R13BQ96KQ4 1090 aa18.07■□□□□ 0.48
CMTM3-203ENST00000460097 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.07■□□□□ 0.48
CMTM3-203ENST00000460097 MYH15Q9Y2K3 1946 aa18.07■□□□□ 0.48
CMTM3-203ENST00000460097 TCP10Q12799 353 aa18.07■□□□□ 0.48
CMTM3-203ENST00000460097 ARID5BQ14865 1188 aa18.07■□□□□ 0.48
CMTM3-203ENST00000460097 CST9Q5W186 159 aa18.07■□□□□ 0.48
CMTM3-203ENST00000460097 NBPF11Q86T75 865 aa18.07■□□□□ 0.48
CMTM3-203ENST00000460097 AGXT2Q9BYV1 514 aa18.07■□□□□ 0.48
CMTM3-203ENST00000460097 TMEM39BQ9GZU3 492 aa18.07■□□□□ 0.48
CMTM3-203ENST00000460097 FAM198AQ9UFP1 575 aa18.07■□□□□ 0.48
CMTM3-203ENST00000460097 TMEM88BA6NKF7 163 aa18.06■□□□□ 0.48
CMTM3-203ENST00000460097 ENTPD3O75355 529 aa18.06■□□□□ 0.48
CMTM3-203ENST00000460097 NF2P35240 595 aa18.06■□□□□ 0.48
CMTM3-203ENST00000460097 PICALMQ13492 652 aa18.06■□□□□ 0.48
CMTM3-203ENST00000460097 SUPT20HL1Q3ZLR7 823 aa18.06■□□□□ 0.48
CMTM3-203ENST00000460097 FCHSD1Q86WN1 690 aa18.06■□□□□ 0.48
CMTM3-203ENST00000460097 RIOK1Q9BRS2 568 aaKnown RBP18.06■□□□□ 0.48
CMTM3-203ENST00000460097 UBXN6Q9BZV1 441 aa18.06■□□□□ 0.48
CMTM3-203ENST00000460097 CNTNAP1P78357 1384 aa18.06■□□□□ 0.48
CMTM3-203ENST00000460097 JAK2O60674 1132 aa18.05■□□□□ 0.48
CMTM3-203ENST00000460097 NPM3O75607 178 aaKnown RBP18.05■□□□□ 0.48
CMTM3-203ENST00000460097 HSPA6P17066 643 aa18.05■□□□□ 0.48
CMTM3-203ENST00000460097 TPM4P67936 248 aa18.05■□□□□ 0.48
CMTM3-203ENST00000460097 IRX5P78411 483 aaPredicted RBP18.05■□□□□ 0.48
CMTM3-203ENST00000460097 FBXL16Q8N461 479 aa18.05■□□□□ 0.48
CMTM3-203ENST00000460097 APPBP2Q92624 585 aa18.05■□□□□ 0.48
CMTM3-203ENST00000460097 DDX4Q9NQI0 724 aaKnown RBP18.05■□□□□ 0.48
CMTM3-203ENST00000460097 MUM1L1Q5H9M0 696 aa18.04■□□□□ 0.48
CMTM3-203ENST00000460097 TEX35Q5T0J7 233 aa18.04■□□□□ 0.48
CMTM3-203ENST00000460097 NBPF12Q5TAG4 269 aaPredicted RBP18.04■□□□□ 0.48
CMTM3-203ENST00000460097 FMR1NBQ8N0W7 255 aaPredicted RBP18.04■□□□□ 0.48
CMTM3-203ENST00000460097 NSUN7Q8NE18 718 aaKnown RBP18.04■□□□□ 0.48
CMTM3-203ENST00000460097 TGFBRAP1Q8WUH2 860 aa18.04■□□□□ 0.48
CMTM3-203ENST00000460097 TEPSINQ96N21 525 aa18.04■□□□□ 0.48
CMTM3-203ENST00000460097 PUS7LQ9H0K6 701 aaKnown RBP18.04■□□□□ 0.48
CMTM3-203ENST00000460097 GOLPH3LQ9H4A5 285 aa18.04■□□□□ 0.48
CMTM3-203ENST00000460097 PNMA6AP0CW24 399 aaPredicted RBP18.04■□□□□ 0.48
CMTM3-203ENST00000460097 SFPQP23246 707 aaKnown RBP eCLIP18.04■□□□□ 0.48
CMTM3-203ENST00000460097 CLCN6P51797 869 aa18.04■□□□□ 0.48
CMTM3-203ENST00000460097 ETF1P62495 437 aaKnown RBP18.04■□□□□ 0.48
CMTM3-203ENST00000460097 ADALQ6DHV7 355 aa18.04■□□□□ 0.48
CMTM3-203ENST00000460097 ZFPM1Q8IX07 1006 aa18.04■□□□□ 0.48
CMTM3-203ENST00000460097 AIDAQ96BJ3 306 aa18.04■□□□□ 0.48
CMTM3-203ENST00000460097 RTEL1Q9NZ71 1219 aa18.04■□□□□ 0.48
CMTM3-203ENST00000460097 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.04■□□□□ 0.48
CMTM3-203ENST00000460097 V9GYY5 206 aaPredicted RBP18.04■□□□□ 0.48
CMTM3-203ENST00000460097 IKBKBO14920 756 aa18.03■□□□□ 0.48
CMTM3-203ENST00000460097 C2orf69Q8N8R5 385 aa18.03■□□□□ 0.48
CMTM3-203ENST00000460097 MRPS27Q92552 414 aaKnown RBP18.03■□□□□ 0.48
CMTM3-203ENST00000460097 OSBP2Q969R2 916 aa18.03■□□□□ 0.48
CMTM3-203ENST00000460097 CRNKL1Q9BZJ0 848 aaKnown RBP18.03■□□□□ 0.48
CMTM3-203ENST00000460097 GBA2Q9HCG7 927 aaPredicted RBP18.03■□□□□ 0.48
CMTM3-203ENST00000460097 CREBZFQ9NS37 354 aa18.03■□□□□ 0.48
CMTM3-203ENST00000460097 MBD4O95243 580 aa18.02■□□□□ 0.48
CMTM3-203ENST00000460097 USP5P45974 858 aa18.02■□□□□ 0.48
CMTM3-203ENST00000460097 SCRN1Q12765 414 aa18.02■□□□□ 0.48
CMTM3-203ENST00000460097 COL9A3Q14050 684 aaPredicted RBP18.02■□□□□ 0.48
CMTM3-203ENST00000460097 Q6ZUG5 572 aa18.02■□□□□ 0.48
CMTM3-203ENST00000460097 ZNF589Q86UQ0 364 aaPredicted RBP18.02■□□□□ 0.48
CMTM3-203ENST00000460097 MAPKAPK5Q8IW41 473 aa18.02■□□□□ 0.48
CMTM3-203ENST00000460097 ZSCAN29Q8IWY8 852 aaPredicted RBP18.02■□□□□ 0.48
CMTM3-203ENST00000460097 LCORLQ8N3X6 602 aa18.02■□□□□ 0.48
CMTM3-203ENST00000460097 AOPEPQ8N6M6 819 aa18.02■□□□□ 0.48
CMTM3-203ENST00000460097 ARMT1Q9H993 441 aa18.02■□□□□ 0.48
CMTM3-203ENST00000460097 TRMT1Q9NXH9 659 aaKnown RBP18.02■□□□□ 0.48
CMTM3-203ENST00000460097 MYH7P12883 1935 aa18.02■□□□□ 0.48
CMTM3-203ENST00000460097 EFCAB8A8MWE9 144 aa18.02■□□□□ 0.47
CMTM3-203ENST00000460097 ZMYM1Q5SVZ6 1142 aa18.02■□□□□ 0.47
CMTM3-203ENST00000460097 CDAN1Q8IWY9 1227 aa18.02■□□□□ 0.47
CMTM3-203ENST00000460097 TXLNBQ8N3L3 684 aa18.02■□□□□ 0.47
CMTM3-203ENST00000460097 FSIP1Q8NA03 581 aa18.02■□□□□ 0.47
CMTM3-203ENST00000460097 HOOK2Q96ED9 719 aa18.02■□□□□ 0.47
CMTM3-203ENST00000460097 KIAA1468Q9P260 1216 aa18.02■□□□□ 0.47
CMTM3-203ENST00000460097 TAF6LQ9Y6J9 622 aa18.02■□□□□ 0.47
CMTM3-203ENST00000460097 TRPM7Q96QT4 1865 aa18.01■□□□□ 0.47
CMTM3-203ENST00000460097 PPP1R12BO60237 982 aaPredicted RBP18.01■□□□□ 0.47
CMTM3-203ENST00000460097 PLA2G4AP47712 749 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms