RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 URI1O94763 535 aaPredicted RBP6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 MBD4O95243 580 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 CCDC175P0C221 793 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 PNMA6AP0CW24 399 aaPredicted RBP6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 GYS1P13807 737 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 CDK11BP21127 795 aaKnown RBP6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 PBX1P40424 430 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 TGFB2P61812 414 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 PDE4BQ07343 736 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 SPAG1Q07617 926 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 BRD3Q15059 726 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 HLFQ16534 295 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 FILIP1LQ4L180 1135 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 CDKAL1Q5VV42 579 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 PI16Q6UXB8 463 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 TPTE2Q6XPS3 522 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 ZNF771Q7L3S4 317 aaPredicted RBP6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 DZIP3Q86Y13 1208 aaKnown RBP6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 ZNF654Q8IZM8 581 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 MAGEB6Q8N7X4 407 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 CEP112Q8N8E3 955 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 ESR2Q92731 530 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 CLIC6Q96NY7 704 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 CDK5RAP2Q96SN8 1893 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 ARID3AQ99856 593 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 SGIP1Q9BQI5 828 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 PHF20Q9BVI0 1012 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 BRIP1Q9BX63 1249 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 CALCOCO1Q9P1Z2 691 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 SERTAD1Q9UHV2 236 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 ZBTB1Q9Y2K1 713 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 ZNF804BA4D1E1 1349 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 ATAD5Q96QE3 1844 aa6.97□□□□□ -1.29
UBQLN4-202ENST00000459954 CCDC151A5D8V7 595 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 NPM3O75607 178 aaKnown RBP6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 DDAH1O94760 285 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 MYL1P05976 194 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 TM4SF1P30408 202 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 HOXA7P31268 230 aaPredicted RBP6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 CYP2C19P33261 490 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 KRT2P35908 639 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 KCNQ4P56696 695 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 AKAP17AQ02040 695 aaKnown RBP6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 PPARAQ07869 468 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 FUT2Q10981 343 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 CUL4BQ13620 913 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 RASGRF1Q13972 1273 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 CCDC152Q4G0S7 254 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 ARL6IP4Q66PJ3 421 aaKnown RBP6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 ZNF662Q6ZS27 426 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 RASGRP2Q7LDG7 609 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 APTXQ7Z2E3 356 aaKnown RBP6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 PPFIBP1Q86W92 1011 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 TMTC1Q8IUR5 882 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 CNGA4Q8IV77 575 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 GOLGA1Q92805 767 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 FBXW7Q969H0 707 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 KIFC2Q96AC6 838 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 UBAC1Q9BSL1 405 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 RNF39Q9H2S5 420 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 SENP2Q9HC62 589 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 BRMS1Q9HCU9 246 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 GNL3LQ9NVN8 582 aaKnown RBP6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 PSD3Q9NYI0 1048 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 ADD3Q9UEY8 706 aaKnown RBP6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 LIMA1Q9UHB6 759 aaKnown RBP6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 TTF2Q9UNY4 1162 aaKnown RBP6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 MYH10P35580 1976 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 TAF1LQ8IZX4 1826 aa6.96□□□□□ -1.3
UBQLN4-202ENST00000459954 TMEM232C9JQI7 657 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 ORC4O43929 436 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 PPFIA3O75145 1194 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 CAMTA2O94983 1202 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 ZBTB7AO95365 584 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 IGHMBP2P38935 993 aaKnown RBP6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 PTGER2P43116 358 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 USP5P45974 858 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 PLA2G4AP47712 749 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 TDO2P48775 406 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 GNG11P61952 73 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 ATP2C1P98194 919 aaPredicted RBP6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 CTDSPL2Q05D32 466 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 PPP2R3AQ06190 1150 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 FMR1Q06787 632 aaKnown RBP eCLIP6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 DPYDQ12882 1025 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 UBE4AQ14139 1066 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 PKN1Q16512 942 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 GRIPAP1Q4V328 841 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 ISM2Q6H9L7 571 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 CC2D1AQ6P1N0 951 aaPredicted RBP6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 SRGAP1Q7Z6B7 1085 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 RAB11FIP4Q86YS3 637 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 ANKRD20A12PQ8NF67 263 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 NKX2-3Q8TAU0 364 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 TNFRSF25Q93038 417 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 CARD6Q9BX69 1037 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 CSRNP2Q9H175 543 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 ARMT1Q9H993 441 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 ARFGAP3Q9NP61 516 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 SH3GLB2Q9NR46 395 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms