RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 KIR3DL1P43629 444 aa9.78□□□□□ -0.84
CKAP2-204ENST00000459902 PMS1P54277 932 aaKnown RBP9.78□□□□□ -0.84
CKAP2-204ENST00000459902 PLD6Q8N2A8 252 aaKnown RBP9.78□□□□□ -0.84
CKAP2-204ENST00000459902 HNRNPLLQ8WVV9 542 aaKnown RBP9.78□□□□□ -0.84
CKAP2-204ENST00000459902 ACTR10Q9NZ32 417 aa9.78□□□□□ -0.84
CKAP2-204ENST00000459902 ZNF214Q9UL59 606 aaPredicted RBP9.78□□□□□ -0.84
CKAP2-204ENST00000459902 C9IYK1 514 aa9.77□□□□□ -0.85
CKAP2-204ENST00000459902 KLF4O43474 513 aa9.77□□□□□ -0.85
CKAP2-204ENST00000459902 GRIK1P39086 918 aa9.77□□□□□ -0.85
CKAP2-204ENST00000459902 TNK2Q07912 1038 aa9.77□□□□□ -0.85
CKAP2-204ENST00000459902 RBL2Q08999 1139 aa9.77□□□□□ -0.85
CKAP2-204ENST00000459902 PPFIBP1Q86W92 1011 aa9.77□□□□□ -0.85
CKAP2-204ENST00000459902 SPACA3Q8IXA5 215 aa9.77□□□□□ -0.85
CKAP2-204ENST00000459902 MFSD4AQ8N468 514 aa9.77□□□□□ -0.85
CKAP2-204ENST00000459902 NETO1Q8TDF5 533 aa9.77□□□□□ -0.85
CKAP2-204ENST00000459902 ARMC5Q96C12 935 aa9.77□□□□□ -0.85
CKAP2-204ENST00000459902 PCDHB10Q9UN67 800 aa9.77□□□□□ -0.85
CKAP2-204ENST00000459902 COBLO75128 1261 aa9.76□□□□□ -0.85
CKAP2-204ENST00000459902 RNF4P78317 190 aa9.76□□□□□ -0.85
CKAP2-204ENST00000459902 MSMPQ1L6U9 139 aa9.76□□□□□ -0.85
CKAP2-204ENST00000459902 INTS5Q6P9B9 1019 aaKnown RBP9.76□□□□□ -0.85
CKAP2-204ENST00000459902 DTWD2Q8NBA8 298 aa9.76□□□□□ -0.85
CKAP2-204ENST00000459902 PHAXQ9H814 394 aaKnown RBP9.76□□□□□ -0.85
CKAP2-204ENST00000459902 FAM155AB1AL88 458 aaPredicted RBP9.75□□□□□ -0.85
CKAP2-204ENST00000459902 NBPF9Q3BBW0 867 aa9.75□□□□□ -0.85
CKAP2-204ENST00000459902 TDRD10Q5VZ19 366 aaKnown RBP9.75□□□□□ -0.85
CKAP2-204ENST00000459902 TP53P04637 393 aaPredicted RBP9.74□□□□□ -0.85
CKAP2-204ENST00000459902 SSTR4P31391 388 aa9.74□□□□□ -0.85
CKAP2-204ENST00000459902 IFI16Q16666 785 aaKnown RBP9.74□□□□□ -0.85
CKAP2-204ENST00000459902 GNPTABQ3T906 1256 aa9.74□□□□□ -0.85
CKAP2-204ENST00000459902 CDKAL1Q5VV42 579 aa9.74□□□□□ -0.85
CKAP2-204ENST00000459902 CKAP2LQ8IYA6 745 aa9.74□□□□□ -0.85
CKAP2-204ENST00000459902 PIWIL2Q8TC59 973 aaKnown RBP9.74□□□□□ -0.85
CKAP2-204ENST00000459902 KLHL6Q8WZ60 621 aa9.74□□□□□ -0.85
CKAP2-204ENST00000459902 MKRN2Q9H000 416 aaKnown RBP9.74□□□□□ -0.85
CKAP2-204ENST00000459902 FAM86C1Q9NVL1 165 aa9.74□□□□□ -0.85
CKAP2-204ENST00000459902 KCNH3Q9ULD8 1083 aa9.74□□□□□ -0.85
CKAP2-204ENST00000459902 R3HCC1Q9Y3T6 440 aaKnown RBP9.74□□□□□ -0.85
CKAP2-204ENST00000459902 ST14Q9Y5Y6 855 aa9.74□□□□□ -0.85
CKAP2-204ENST00000459902 CD97P48960 835 aa9.73□□□□□ -0.85
CKAP2-204ENST00000459902 BBS9Q3SYG4 887 aa9.73□□□□□ -0.85
CKAP2-204ENST00000459902 AXDND1Q5T1B0 1012 aaPredicted RBP9.73□□□□□ -0.85
CKAP2-204ENST00000459902 LARP1BQ659C4 914 aaKnown RBP9.73□□□□□ -0.85
CKAP2-204ENST00000459902 MICAL1Q8TDZ2 1067 aa9.73□□□□□ -0.85
CKAP2-204ENST00000459902 HSPA12BQ96MM6 686 aa9.73□□□□□ -0.85
CKAP2-204ENST00000459902 HIRIP3Q9BW71 556 aaPredicted RBP9.73□□□□□ -0.85
CKAP2-204ENST00000459902 SLC7A5Q01650 507 aa9.72□□□□□ -0.85
CKAP2-204ENST00000459902 AUHQ13825 339 aaKnown RBP9.72□□□□□ -0.85
CKAP2-204ENST00000459902 VHLLQ6RSH7 139 aa9.72□□□□□ -0.85
CKAP2-204ENST00000459902 CCDC144CPQ8IYA2 1237 aa9.72□□□□□ -0.85
CKAP2-204ENST00000459902 CELF2-AS1Q8N7Q2 184 aa9.72□□□□□ -0.85
CKAP2-204ENST00000459902 SMARCC1Q92922 1105 aaPredicted RBP9.72□□□□□ -0.85
CKAP2-204ENST00000459902 SNX11Q9Y5W9 270 aa9.72□□□□□ -0.85
CKAP2-204ENST00000459902 TMEM265A0A087WTH1 108 aa9.71□□□□□ -0.86
CKAP2-204ENST00000459902 SNW1Q13573 536 aaKnown RBP9.71□□□□□ -0.86
CKAP2-204ENST00000459902 RAB33AQ14088 237 aa9.71□□□□□ -0.86
CKAP2-204ENST00000459902 FXNQ16595 210 aa9.71□□□□□ -0.86
CKAP2-204ENST00000459902 ZMYM1Q5SVZ6 1142 aa9.71□□□□□ -0.86
CKAP2-204ENST00000459902 DCAF15Q66K64 600 aa9.71□□□□□ -0.86
CKAP2-204ENST00000459902 C6orf15Q6UXA7 325 aaPredicted RBP9.71□□□□□ -0.86
CKAP2-204ENST00000459902 UBXN4Q92575 508 aa9.71□□□□□ -0.86
CKAP2-204ENST00000459902 DNAJC2Q99543 621 aaKnown RBP9.71□□□□□ -0.86
CKAP2-204ENST00000459902 DUSP15Q9H1R2 295 aaPredicted RBP9.71□□□□□ -0.86
CKAP2-204ENST00000459902 ST7Q9NRC1 585 aa9.71□□□□□ -0.86
CKAP2-204ENST00000459902 BSDC1Q9NW68 430 aaPredicted RBP9.71□□□□□ -0.86
CKAP2-204ENST00000459902 H3BS24 57 aa9.7□□□□□ -0.86
CKAP2-204ENST00000459902 SHOXO15266 292 aa9.7□□□□□ -0.86
CKAP2-204ENST00000459902 CLCN7P51798 805 aa9.7□□□□□ -0.86
CKAP2-204ENST00000459902 ANKRD39Q53RE8 183 aa9.7□□□□□ -0.86
CKAP2-204ENST00000459902 KIAA1211LQ6NV74 962 aa9.7□□□□□ -0.86
CKAP2-204ENST00000459902 DTX1Q86Y01 620 aa9.7□□□□□ -0.86
CKAP2-204ENST00000459902 C7orf61Q8IZ16 206 aa9.7□□□□□ -0.86
CKAP2-204ENST00000459902 GPR62Q9BZJ7 368 aa9.7□□□□□ -0.86
CKAP2-204ENST00000459902 PRDM14Q9GZV8 571 aa9.7□□□□□ -0.86
CKAP2-204ENST00000459902 SEMA3GQ9NS98 782 aa9.7□□□□□ -0.86
CKAP2-204ENST00000459902 SHISA3A0PJX4 238 aa9.69□□□□□ -0.86
CKAP2-204ENST00000459902 KIAA1324LA8MWY0 1029 aaPredicted RBP9.69□□□□□ -0.86
CKAP2-204ENST00000459902 B2RBV5 119 aa9.69□□□□□ -0.86
CKAP2-204ENST00000459902 DDAH1O94760 285 aa9.69□□□□□ -0.86
CKAP2-204ENST00000459902 SRFP11831 508 aa9.69□□□□□ -0.86
CKAP2-204ENST00000459902 SPINK2P20155 84 aa9.69□□□□□ -0.86
CKAP2-204ENST00000459902 TMC3Q7Z5M5 1100 aa9.69□□□□□ -0.86
CKAP2-204ENST00000459902 FAM178BQ8IXR5 827 aa9.69□□□□□ -0.86
CKAP2-204ENST00000459902 HRASLS5Q96KN8 279 aa9.69□□□□□ -0.86
CKAP2-204ENST00000459902 FBXL21Q9UKT6 434 aa9.69□□□□□ -0.86
CKAP2-204ENST00000459902 VAV3Q9UKW4 847 aa9.69□□□□□ -0.86
CKAP2-204ENST00000459902 WASH4PA8MWX3 477 aa9.68□□□□□ -0.86
CKAP2-204ENST00000459902 CBFA2T2O43439 604 aa9.68□□□□□ -0.86
CKAP2-204ENST00000459902 PRKCQQ04759 706 aa9.68□□□□□ -0.86
CKAP2-204ENST00000459902 BNIP3Q12983 259 aa9.68□□□□□ -0.86
CKAP2-204ENST00000459902 NCAPHQ15003 741 aa9.68□□□□□ -0.86
CKAP2-204ENST00000459902 AOC3Q16853 763 aa9.68□□□□□ -0.86
CKAP2-204ENST00000459902 NBPF6Q5VWK0 638 aa9.68□□□□□ -0.86
CKAP2-204ENST00000459902 UBE2FQ969M7 185 aa9.68□□□□□ -0.86
CKAP2-204ENST00000459902 NBPF4Q96M43 638 aa9.68□□□□□ -0.86
CKAP2-204ENST00000459902 HAUS7Q99871 368 aa9.68□□□□□ -0.86
CKAP2-204ENST00000459902 TRIM55Q9BYV6 548 aa9.68□□□□□ -0.86
CKAP2-204ENST00000459902 ZSWIM5Q9P217 1185 aa9.68□□□□□ -0.86
CKAP2-204ENST00000459902 USP35Q9P2H5 1018 aa9.68□□□□□ -0.86
CKAP2-204ENST00000459902 ZNF451Q9Y4E5 1061 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms