RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 CCDC69A6NI79 296 aa10.22□□□□□ -0.77
RIF1-208ENST00000457745 POTECB2RU33 542 aa10.22□□□□□ -0.77
RIF1-208ENST00000457745 PCP11498 1178 aaKnown RBP10.22□□□□□ -0.77
RIF1-208ENST00000457745 RASA3Q14644 834 aa10.22□□□□□ -0.77
RIF1-208ENST00000457745 SEPT2Q15019 361 aa10.22□□□□□ -0.77
RIF1-208ENST00000457745 FOXD4L6Q3SYB3 417 aaPredicted RBP10.22□□□□□ -0.77
RIF1-208ENST00000457745 IFIT1BQ5T764 474 aaKnown RBP10.22□□□□□ -0.77
RIF1-208ENST00000457745 FOXD4L3Q6VB84 417 aaPredicted RBP10.22□□□□□ -0.77
RIF1-208ENST00000457745 MIGA2Q7L4E1 593 aa10.22□□□□□ -0.77
RIF1-208ENST00000457745 TTC6Q86TZ1 520 aa10.22□□□□□ -0.77
RIF1-208ENST00000457745 FERMT3Q86UX7 667 aa10.22□□□□□ -0.77
RIF1-208ENST00000457745 ZSCAN29Q8IWY8 852 aaPredicted RBP10.22□□□□□ -0.77
RIF1-208ENST00000457745 CCDC82Q8N4S0 544 aa10.22□□□□□ -0.77
RIF1-208ENST00000457745 SRBD1Q8N5C6 995 aaKnown RBP10.22□□□□□ -0.77
RIF1-208ENST00000457745 MTA3Q9BTC8 594 aa10.22□□□□□ -0.77
RIF1-208ENST00000457745 CWC22Q9HCG8 908 aaKnown RBP10.22□□□□□ -0.77
RIF1-208ENST00000457745 TCP11L1Q9NUJ3 509 aa10.22□□□□□ -0.77
RIF1-208ENST00000457745 MTMR7Q9Y216 660 aa10.22□□□□□ -0.77
RIF1-208ENST00000457745 SLC12A7Q9Y666 1083 aa10.22□□□□□ -0.77
RIF1-208ENST00000457745 OTOFQ9HC10 1997 aa10.22□□□□□ -0.77
RIF1-208ENST00000457745 CNTNAP5Q8WYK1 1306 aa10.22□□□□□ -0.77
RIF1-208ENST00000457745 A0A1W2PRG0 241 aa10.21□□□□□ -0.77
RIF1-208ENST00000457745 KIF28PB7ZC32 967 aa10.21□□□□□ -0.77
RIF1-208ENST00000457745 STX6O43752 255 aa10.21□□□□□ -0.77
RIF1-208ENST00000457745 BAG4O95429 457 aaKnown RBP10.21□□□□□ -0.77
RIF1-208ENST00000457745 SLC3A2P08195 630 aaKnown RBP10.21□□□□□ -0.77
RIF1-208ENST00000457745 GOLGA8HP0CJ92 632 aa10.21□□□□□ -0.77
RIF1-208ENST00000457745 TSPY3P0CV98 308 aa10.21□□□□□ -0.77
RIF1-208ENST00000457745 TSPY8P0CW00 308 aa10.21□□□□□ -0.77
RIF1-208ENST00000457745 RESTQ13127 1097 aa10.21□□□□□ -0.77
RIF1-208ENST00000457745 NBR1Q14596 966 aa10.21□□□□□ -0.77
RIF1-208ENST00000457745 GRM4Q14833 912 aa10.21□□□□□ -0.77
RIF1-208ENST00000457745 PKN1Q16512 942 aa10.21□□□□□ -0.77
RIF1-208ENST00000457745 GPR162Q16538 588 aa10.21□□□□□ -0.77
RIF1-208ENST00000457745 RTN1Q16799 776 aa10.21□□□□□ -0.77
RIF1-208ENST00000457745 NBPF12Q5TAG4 269 aaPredicted RBP10.21□□□□□ -0.77
RIF1-208ENST00000457745 ANGEL2Q5VTE6 544 aaKnown RBP10.21□□□□□ -0.77
RIF1-208ENST00000457745 TMTC3Q6ZXV5 915 aa10.21□□□□□ -0.77
RIF1-208ENST00000457745 ZNF444Q8N0Y2 327 aaPredicted RBP10.21□□□□□ -0.77
RIF1-208ENST00000457745 GPC2Q8N158 579 aa10.21□□□□□ -0.77
RIF1-208ENST00000457745 OGFOD1Q8N543 542 aa10.21□□□□□ -0.77
RIF1-208ENST00000457745 FANCBQ8NB91 859 aa10.21□□□□□ -0.77
RIF1-208ENST00000457745 CSRNP1Q96S65 589 aa10.21□□□□□ -0.77
RIF1-208ENST00000457745 GLIS2Q9BZE0 524 aaPredicted RBP10.21□□□□□ -0.77
RIF1-208ENST00000457745 MTMR4Q9NYA4 1195 aa10.21□□□□□ -0.77
RIF1-208ENST00000457745 ORC3Q9UBD5 711 aaPredicted RBP10.21□□□□□ -0.77
RIF1-208ENST00000457745 PHIPQ8WWQ0 1821 aa10.21□□□□□ -0.78
RIF1-208ENST00000457745 VPS37CA5D8V6 355 aaPredicted RBP10.2□□□□□ -0.78
RIF1-208ENST00000457745 USP17L5A8MUK1 530 aa10.2□□□□□ -0.78
RIF1-208ENST00000457745 CYTH3O43739 400 aa10.2□□□□□ -0.78
RIF1-208ENST00000457745 F13A1P00488 732 aa10.2□□□□□ -0.78
RIF1-208ENST00000457745 GH2P01242 217 aa10.2□□□□□ -0.78
RIF1-208ENST00000457745 HLA-DOAP06340 250 aa10.2□□□□□ -0.78
RIF1-208ENST00000457745 ZSCAN22P10073 491 aaPredicted RBP10.2□□□□□ -0.78
RIF1-208ENST00000457745 TAL1P17542 331 aaPredicted RBP10.2□□□□□ -0.78
RIF1-208ENST00000457745 DGKZQ13574 1117 aa10.2□□□□□ -0.78
RIF1-208ENST00000457745 NOM1Q5C9Z4 860 aaKnown RBP10.2□□□□□ -0.78
RIF1-208ENST00000457745 FKBP1CQ5VVH2 108 aa10.2□□□□□ -0.78
RIF1-208ENST00000457745 FRMPD2Q68DX3 1309 aaPredicted RBP10.2□□□□□ -0.78
RIF1-208ENST00000457745 IQCA1Q86XH1 822 aa10.2□□□□□ -0.78
RIF1-208ENST00000457745 PNMA1Q8ND90 353 aa10.2□□□□□ -0.78
RIF1-208ENST00000457745 IL27Q8NEV9 243 aa10.2□□□□□ -0.78
RIF1-208ENST00000457745 ACER1Q8TDN7 264 aa10.2□□□□□ -0.78
RIF1-208ENST00000457745 LLPHQ9BRT6 129 aaKnown RBP10.2□□□□□ -0.78
RIF1-208ENST00000457745 GGA3Q9NZ52 723 aa10.2□□□□□ -0.78
RIF1-208ENST00000457745 PI4KBQ9UBF8 816 aa10.2□□□□□ -0.78
RIF1-208ENST00000457745 MAD2L2Q9UI95 211 aa10.2□□□□□ -0.78
RIF1-208ENST00000457745 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.2□□□□□ -0.78
RIF1-208ENST00000457745 DOCK1Q14185 1865 aa10.19□□□□□ -0.78
RIF1-208ENST00000457745 PHF20L1A8MW92 1017 aa10.19□□□□□ -0.78
RIF1-208ENST00000457745 ADM5C9JUS6 153 aa10.19□□□□□ -0.78
RIF1-208ENST00000457745 MPHOSPH10O00566 681 aaKnown RBP10.19□□□□□ -0.78
RIF1-208ENST00000457745 DDAH1O94760 285 aa10.19□□□□□ -0.78
RIF1-208ENST00000457745 FMNL1O95466 1100 aaPredicted RBP10.19□□□□□ -0.78
RIF1-208ENST00000457745 IFNAR1P17181 557 aa10.19□□□□□ -0.78
RIF1-208ENST00000457745 MCM4P33991 863 aa10.19□□□□□ -0.78
RIF1-208ENST00000457745 ECE1P42892 770 aa10.19□□□□□ -0.78
RIF1-208ENST00000457745 FMR1Q06787 632 aaKnown RBP eCLIP10.19□□□□□ -0.78
RIF1-208ENST00000457745 LARP1BQ659C4 914 aaKnown RBP10.19□□□□□ -0.78
RIF1-208ENST00000457745 TTBK2Q6IQ55 1244 aa10.19□□□□□ -0.78
RIF1-208ENST00000457745 TYW1BQ6NUM6 668 aa10.19□□□□□ -0.78
RIF1-208ENST00000457745 USP17L2Q6R6M4 530 aa10.19□□□□□ -0.78
RIF1-208ENST00000457745 FAM83AQ86UY5 434 aa10.19□□□□□ -0.78
RIF1-208ENST00000457745 DGKHQ86XP1 1220 aa10.19□□□□□ -0.78
RIF1-208ENST00000457745 AMOTL1Q8IY63 956 aa10.19□□□□□ -0.78
RIF1-208ENST00000457745 CRACR2BQ8N4Y2 399 aaPredicted RBP10.19□□□□□ -0.78
RIF1-208ENST00000457745 EFCAB3Q8N7B9 438 aa10.19□□□□□ -0.78
RIF1-208ENST00000457745 PIBF1Q8WXW3 757 aa10.19□□□□□ -0.78
RIF1-208ENST00000457745 SLC26A6Q9BXS9 759 aa10.19□□□□□ -0.78
RIF1-208ENST00000457745 FTOQ9C0B1 505 aaKnown RBP eCLIP10.19□□□□□ -0.78
RIF1-208ENST00000457745 DHX36Q9H2U1 1008 aaKnown RBP10.19□□□□□ -0.78
RIF1-208ENST00000457745 GDPD2Q9HCC8 539 aa10.19□□□□□ -0.78
RIF1-208ENST00000457745 SWAP70Q9UH65 585 aa10.19□□□□□ -0.78
RIF1-208ENST00000457745 STX8Q9UNK0 236 aa10.19□□□□□ -0.78
RIF1-208ENST00000457745 COLQQ9Y215 455 aaPredicted RBP10.19□□□□□ -0.78
RIF1-208ENST00000457745 WDR90Q96KV7 1748 aa10.19□□□□□ -0.78
RIF1-208ENST00000457745 PALM3A6NDB9 673 aaPredicted RBP10.18□□□□□ -0.78
RIF1-208ENST00000457745 FAM205CA6NFA0 338 aa10.18□□□□□ -0.78
RIF1-208ENST00000457745 PDHBP11177 359 aa10.18□□□□□ -0.78
RIF1-208ENST00000457745 EEF2P13639 858 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms