RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 ETF1P62495 437 aaKnown RBP14.19□□□□□ -0.14
LINC00959-201ENST00000456581 NEK11Q8NG66 645 aa14.19□□□□□ -0.14
LINC00959-201ENST00000456581 ZFP91Q96JP5 570 aaPredicted RBP14.19□□□□□ -0.14
LINC00959-201ENST00000456581 ZSCAN10Q96SZ4 725 aaPredicted RBP14.19□□□□□ -0.14
LINC00959-201ENST00000456581 TUBE1Q9UJT0 475 aa14.19□□□□□ -0.14
LINC00959-201ENST00000456581 FAM205CA6NFA0 338 aa14.18□□□□□ -0.14
LINC00959-201ENST00000456581 FMNL1O95466 1100 aaPredicted RBP14.18□□□□□ -0.14
LINC00959-201ENST00000456581 LDHBP07195 334 aaKnown RBP14.18□□□□□ -0.14
LINC00959-201ENST00000456581 IFNAR1P17181 557 aa14.18□□□□□ -0.14
LINC00959-201ENST00000456581 GABPB1Q06547 395 aaPredicted RBP14.18□□□□□ -0.14
LINC00959-201ENST00000456581 CRY2Q49AN0 593 aa14.18□□□□□ -0.14
LINC00959-201ENST00000456581 POTEAQ6S8J7 498 aa14.18□□□□□ -0.14
LINC00959-201ENST00000456581 CCDC125Q86Z20 511 aa14.18□□□□□ -0.14
LINC00959-201ENST00000456581 OXER1Q8TDS5 423 aa14.18□□□□□ -0.14
LINC00959-201ENST00000456581 CCDC34Q96HJ3 373 aa14.18□□□□□ -0.14
LINC00959-201ENST00000456581 CRNKL1Q9BZJ0 848 aaKnown RBP14.18□□□□□ -0.14
LINC00959-201ENST00000456581 TOP1P11387 765 aaKnown RBP14.18□□□□□ -0.14
LINC00959-201ENST00000456581 TOB1P50616 345 aaPredicted RBP14.18□□□□□ -0.14
LINC00959-201ENST00000456581 TPM4P67936 248 aa14.18□□□□□ -0.14
LINC00959-201ENST00000456581 KARSQ15046 597 aaKnown RBP14.18□□□□□ -0.14
LINC00959-201ENST00000456581 CRACR2BQ8N4Y2 399 aaPredicted RBP14.18□□□□□ -0.14
LINC00959-201ENST00000456581 SLC44A5Q8NCS7 719 aa14.18□□□□□ -0.14
LINC00959-201ENST00000456581 MED15Q96RN5 788 aa14.18□□□□□ -0.14
LINC00959-201ENST00000456581 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.18□□□□□ -0.14
LINC00959-201ENST00000456581 PSDA5PKW4 1024 aaPredicted RBP14.17□□□□□ -0.14
LINC00959-201ENST00000456581 VWA3AA6NCI4 1184 aa14.17□□□□□ -0.14
LINC00959-201ENST00000456581 RIMBP2O15034 1052 aa14.17□□□□□ -0.14
LINC00959-201ENST00000456581 IFIT1BQ5T764 474 aaKnown RBP14.17□□□□□ -0.14
LINC00959-201ENST00000456581 RESP18Q5W5W9 173 aa14.17□□□□□ -0.14
LINC00959-201ENST00000456581 MSL1Q68DK7 614 aa14.17□□□□□ -0.14
LINC00959-201ENST00000456581 TMEM139Q8IV31 216 aa14.17□□□□□ -0.14
LINC00959-201ENST00000456581 SAMSN1Q9NSI8 373 aaKnown RBP14.17□□□□□ -0.14
LINC00959-201ENST00000456581 SAP30BPQ9UHR5 308 aaKnown RBP14.17□□□□□ -0.14
LINC00959-201ENST00000456581 LEMD3Q9Y2U8 911 aa14.17□□□□□ -0.14
LINC00959-201ENST00000456581 POLR2DO15514 142 aaKnown RBP14.17□□□□□ -0.14
LINC00959-201ENST00000456581 VEGFAP15692 232 aaPredicted RBP14.17□□□□□ -0.14
LINC00959-201ENST00000456581 KRBA2Q6ZNG9 492 aa14.17□□□□□ -0.14
LINC00959-201ENST00000456581 VSTM4Q8IW00 320 aa14.17□□□□□ -0.14
LINC00959-201ENST00000456581 TGFBRAP1Q8WUH2 860 aa14.17□□□□□ -0.14
LINC00959-201ENST00000456581 CD209Q9NNX6 404 aa14.17□□□□□ -0.14
LINC00959-201ENST00000456581 TMEM51Q9NW97 253 aa14.17□□□□□ -0.14
LINC00959-201ENST00000456581 MTMR7Q9Y216 660 aa14.17□□□□□ -0.14
LINC00959-201ENST00000456581 C6orf229H3BNL8 230 aa14.16□□□□□ -0.14
LINC00959-201ENST00000456581 TRIM29Q14134 588 aa14.16□□□□□ -0.14
LINC00959-201ENST00000456581 SLC27A3Q5K4L6 730 aa14.16□□□□□ -0.14
LINC00959-201ENST00000456581 KCND1Q9NSA2 647 aa14.16□□□□□ -0.14
LINC00959-201ENST00000456581 SERTAD1Q9UHV2 236 aa14.16□□□□□ -0.14
LINC00959-201ENST00000456581 PCDHB6Q9Y5E3 794 aa14.16□□□□□ -0.14
LINC00959-201ENST00000456581 PARP3Q9Y6F1 533 aa14.16□□□□□ -0.14
LINC00959-201ENST00000456581 DUOX1Q9NRD9 1551 aa14.16□□□□□ -0.14
LINC00959-201ENST00000456581 IKBKBO14920 756 aa14.16□□□□□ -0.14
LINC00959-201ENST00000456581 ABL1P00519 1130 aa14.16□□□□□ -0.14
LINC00959-201ENST00000456581 COL23A1Q86Y22 540 aaPredicted RBP14.16□□□□□ -0.14
LINC00959-201ENST00000456581 MAPKAPK5Q8IW41 473 aa14.16□□□□□ -0.14
LINC00959-201ENST00000456581 DIS3L2Q8IYB7 885 aaKnown RBP14.16□□□□□ -0.14
LINC00959-201ENST00000456581 SMYD4Q8IYR2 804 aaPredicted RBP14.16□□□□□ -0.14
LINC00959-201ENST00000456581 VPS54Q9P1Q0 977 aa14.16□□□□□ -0.14
LINC00959-201ENST00000456581 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.16□□□□□ -0.14
LINC00959-201ENST00000456581 PPP2R2CQ9Y2T4 447 aa14.16□□□□□ -0.14
LINC00959-201ENST00000456581 NFE2L3Q9Y4A8 694 aa14.16□□□□□ -0.14
LINC00959-201ENST00000456581 CCDC88AQ3V6T2 1871 aa14.15□□□□□ -0.14
LINC00959-201ENST00000456581 USP5P45974 858 aa14.15□□□□□ -0.14
LINC00959-201ENST00000456581 STX17P56962 302 aa14.15□□□□□ -0.14
LINC00959-201ENST00000456581 ZNF804AQ7Z570 1209 aa14.15□□□□□ -0.14
LINC00959-201ENST00000456581 CPLX3Q8WVH0 158 aa14.15□□□□□ -0.14
LINC00959-201ENST00000456581 GGA1Q9UJY5 639 aa14.15□□□□□ -0.14
LINC00959-201ENST00000456581 MAN1B1Q9UKM7 699 aa14.15□□□□□ -0.14
LINC00959-201ENST00000456581 V9GY48 417 aaPredicted RBP14.15□□□□□ -0.14
LINC00959-201ENST00000456581 APBA3O96018 575 aa14.15□□□□□ -0.14
LINC00959-201ENST00000456581 PLCD1P51178 756 aa14.15□□□□□ -0.14
LINC00959-201ENST00000456581 GNG11P61952 73 aa14.15□□□□□ -0.14
LINC00959-201ENST00000456581 TROAPQ12815 778 aa14.15□□□□□ -0.14
LINC00959-201ENST00000456581 NOM1Q5C9Z4 860 aaKnown RBP14.15□□□□□ -0.14
LINC00959-201ENST00000456581 KLHL10Q6JEL2 608 aa14.15□□□□□ -0.14
LINC00959-201ENST00000456581 IQCA1Q86XH1 822 aa14.15□□□□□ -0.14
LINC00959-201ENST00000456581 MNS1Q8NEH6 495 aa14.15□□□□□ -0.14
LINC00959-201ENST00000456581 TBC1D16Q8TBP0 767 aa14.15□□□□□ -0.14
LINC00959-201ENST00000456581 UBXN4Q92575 508 aa14.15□□□□□ -0.14
LINC00959-201ENST00000456581 RBM17Q96I25 401 aaKnown RBP14.15□□□□□ -0.14
LINC00959-201ENST00000456581 MYH6P13533 1939 aa14.15□□□□□ -0.14
LINC00959-201ENST00000456581 IRX5P78411 483 aaPredicted RBP14.14□□□□□ -0.15
LINC00959-201ENST00000456581 TRIM22Q8IYM9 498 aa14.14□□□□□ -0.15
LINC00959-201ENST00000456581 WDR66Q8TBY9 1149 aa14.14□□□□□ -0.15
LINC00959-201ENST00000456581 STAMQ92783 540 aa14.14□□□□□ -0.15
LINC00959-201ENST00000456581 MXD3Q9BW11 206 aa14.14□□□□□ -0.15
LINC00959-201ENST00000456581 ATP8A2Q9NTI2 1148 aa14.14□□□□□ -0.15
LINC00959-201ENST00000456581 PDS5AQ29RF7 1337 aaKnown RBP14.14□□□□□ -0.15
LINC00959-201ENST00000456581 MMP1P03956 469 aa14.14□□□□□ -0.15
LINC00959-201ENST00000456581 CAPN2P17655 700 aa14.14□□□□□ -0.15
LINC00959-201ENST00000456581 CDK11BP21127 795 aaKnown RBP14.14□□□□□ -0.15
LINC00959-201ENST00000456581 HNRNPH2P55795 449 aaKnown RBP14.14□□□□□ -0.15
LINC00959-201ENST00000456581 EARS2Q5JPH6 523 aaKnown RBP14.14□□□□□ -0.15
LINC00959-201ENST00000456581 RASGRP2Q7LDG7 609 aa14.14□□□□□ -0.15
LINC00959-201ENST00000456581 TMTC2Q8N394 836 aa14.14□□□□□ -0.15
LINC00959-201ENST00000456581 NOL10Q9BSC4 688 aaKnown RBP14.14□□□□□ -0.15
LINC00959-201ENST00000456581 MKRN1Q9UHC7 482 aaKnown RBP14.14□□□□□ -0.15
LINC00959-201ENST00000456581 USP17L3A6NCW0 530 aa14.14□□□□□ -0.15
LINC00959-201ENST00000456581 USP17L4A6NCW7 530 aa14.14□□□□□ -0.15
LINC00959-201ENST00000456581 TSPY2A6NKD2 308 aa14.14□□□□□ -0.15
LINC00959-201ENST00000456581 F8W031 263 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms