RNA–Protein interactions for RNA: ENST00000456378.1

UBP1-205, Transcript of upstream binding protein 1, humanhuman

TSL 4

Gene UBP1, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-205ENST00000456378 PPARAQ07869 468 aa28.31■■■□□ 2.12
UBP1-205ENST00000456378 MCMDC2Q4G0Z9 681 aa28.31■■■□□ 2.12
UBP1-205ENST00000456378 GTF3C2Q8WUA4 911 aaPredicted RBP28.31■■■□□ 2.12
UBP1-205ENST00000456378 GJD2Q9UKL4 321 aa28.31■■■□□ 2.12
UBP1-205ENST00000456378 KIAA0100Q14667 2235 aaKnown RBP28.3■■■□□ 2.12
UBP1-205ENST00000456378 ATP2B2Q01814 1243 aa28.3■■■□□ 2.12
UBP1-205ENST00000456378 LBX2Q6XYB7 198 aa28.3■■■□□ 2.12
UBP1-205ENST00000456378 ZNF589Q86UQ0 364 aaPredicted RBP28.3■■■□□ 2.12
UBP1-205ENST00000456378 SPICE1Q8N0Z3 855 aa28.3■■■□□ 2.12
UBP1-205ENST00000456378 VCPKMTQ9H867 229 aa28.3■■■□□ 2.12
UBP1-205ENST00000456378 SPDYE16A6NNV3 312 aaPredicted RBP28.29■■■□□ 2.12
UBP1-205ENST00000456378 ADCY3O60266 1144 aa28.29■■■□□ 2.12
UBP1-205ENST00000456378 SDSP20132 328 aa28.29■■■□□ 2.12
UBP1-205ENST00000456378 IRF5Q13568 498 aa28.29■■■□□ 2.12
UBP1-205ENST00000456378 MTFR1Q15390 333 aa28.29■■■□□ 2.12
UBP1-205ENST00000456378 PORCNQ9H237 461 aa28.29■■■□□ 2.12
UBP1-205ENST00000456378 RABGAP1Q9Y3P9 1069 aa28.29■■■□□ 2.12
UBP1-205ENST00000456378 IGKV6D-41A0A0C4DH26 115 aa28.28■■■□□ 2.12
UBP1-205ENST00000456378 ZNF444Q8N0Y2 327 aaPredicted RBP28.28■■■□□ 2.12
UBP1-205ENST00000456378 LPAR1Q92633 364 aa28.28■■■□□ 2.12
UBP1-205ENST00000456378 SH2D4AQ9H788 454 aa28.28■■■□□ 2.12
UBP1-205ENST00000456378 BTBD7Q9P203 1132 aa28.28■■■□□ 2.12
UBP1-205ENST00000456378 TACC3Q9Y6A5 838 aa28.28■■■□□ 2.12
UBP1-205ENST00000456378 ELNP15502 786 aa28.27■■■□□ 2.12
UBP1-205ENST00000456378 EN2P19622 333 aaPredicted RBP28.27■■■□□ 2.12
UBP1-205ENST00000456378 COG2Q14746 738 aa28.27■■■□□ 2.12
UBP1-205ENST00000456378 ALX1Q15699 326 aa28.27■■■□□ 2.12
UBP1-205ENST00000456378 SLAIN1Q8ND83 568 aa28.27■■■□□ 2.12
UBP1-205ENST00000456378 TMEM106CQ9BVX2 250 aa28.27■■■□□ 2.12
UBP1-205ENST00000456378 TANGO6Q9C0B7 1094 aa28.27■■■□□ 2.12
UBP1-205ENST00000456378 INCENPQ9NQS7 918 aa28.27■■■□□ 2.12
UBP1-205ENST00000456378 RBBP6Q7Z6E9 1792 aaKnown RBP28.27■■■□□ 2.12
UBP1-205ENST00000456378 RLFQ13129 1914 aa28.26■■■□□ 2.11
UBP1-205ENST00000456378 CTDSPL2Q05D32 466 aa28.26■■■□□ 2.11
UBP1-205ENST00000456378 PXYLP1Q8TE99 480 aa28.26■■■□□ 2.11
UBP1-205ENST00000456378 ZNF287Q9HBT7 754 aa28.26■■■□□ 2.11
UBP1-205ENST00000456378 BRCA2P51587 3418 aa28.25■■■□□ 2.11
UBP1-205ENST00000456378 PLXNB2O15031 1838 aa28.25■■■□□ 2.11
UBP1-205ENST00000456378 HSPD1P10809 573 aaKnown RBP28.25■■■□□ 2.11
UBP1-205ENST00000456378 PDE4BQ07343 736 aa28.25■■■□□ 2.11
UBP1-205ENST00000456378 HOXC10Q9NYD6 342 aa28.25■■■□□ 2.11
UBP1-205ENST00000456378 NYAP2Q9P242 653 aa28.25■■■□□ 2.11
UBP1-205ENST00000456378 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.25■■■□□ 2.11
UBP1-205ENST00000456378 FGAP02671 866 aa28.24■■■□□ 2.11
UBP1-205ENST00000456378 MAPK4P31152 587 aa28.24■■■□□ 2.11
UBP1-205ENST00000456378 FAM47AQ5JRC9 791 aa28.24■■■□□ 2.11
UBP1-205ENST00000456378 BIN2Q9UBW5 565 aaPredicted RBP28.24■■■□□ 2.11
UBP1-205ENST00000456378 ANAPC4Q9UJX5 808 aa28.24■■■□□ 2.11
UBP1-205ENST00000456378 CCDC171Q6TFL3 1326 aa28.23■■■□□ 2.11
UBP1-205ENST00000456378 WDR46O15213 610 aaKnown RBP28.23■■■□□ 2.11
UBP1-205ENST00000456378 SLC3A2P08195 630 aaKnown RBP28.23■■■□□ 2.11
UBP1-205ENST00000456378 DSG3P32926 999 aa28.23■■■□□ 2.11
UBP1-205ENST00000456378 GPR142Q7Z601 462 aa28.23■■■□□ 2.11
UBP1-205ENST00000456378 NEDD1Q8NHV4 660 aa28.23■■■□□ 2.11
UBP1-205ENST00000456378 CEP95Q96GE4 821 aa28.23■■■□□ 2.11
UBP1-205ENST00000456378 CLIP2Q9UDT6 1046 aa28.23■■■□□ 2.11
UBP1-205ENST00000456378 FLOT1O75955 427 aa28.22■■■□□ 2.11
UBP1-205ENST00000456378 TFAP4Q01664 338 aa28.22■■■□□ 2.11
UBP1-205ENST00000456378 GOPCQ9HD26 462 aa28.22■■■□□ 2.11
UBP1-205ENST00000456378 MTMR4Q9NYA4 1195 aa28.22■■■□□ 2.11
UBP1-205ENST00000456378 INHAP05111 366 aa28.21■■■□□ 2.11
UBP1-205ENST00000456378 CCL5P13501 91 aa28.21■■■□□ 2.11
UBP1-205ENST00000456378 GSPT1P15170 499 aaKnown RBP28.21■■■□□ 2.11
UBP1-205ENST00000456378 PLEKHH3Q7Z736 793 aa28.21■■■□□ 2.11
UBP1-205ENST00000456378 USP6NLQ92738 828 aa28.21■■■□□ 2.11
UBP1-205ENST00000456378 ATG4CQ96DT6 458 aa28.21■■■□□ 2.11
UBP1-205ENST00000456378 PLIN4Q96Q06 1357 aa28.21■■■□□ 2.11
UBP1-205ENST00000456378 RAD21O60216 631 aa28.2■■■□□ 2.1
UBP1-205ENST00000456378 TSPY3P0CV98 308 aa28.2■■■□□ 2.1
UBP1-205ENST00000456378 TSPY8P0CW00 308 aa28.2■■■□□ 2.1
UBP1-205ENST00000456378 UBXN2AP68543 259 aa28.2■■■□□ 2.1
UBP1-205ENST00000456378 MORN1Q5T089 497 aa28.2■■■□□ 2.1
UBP1-205ENST00000456378 FAM83BQ5T0W9 1011 aa28.2■■■□□ 2.1
UBP1-205ENST00000456378 TTC22Q5TAA0 569 aa28.2■■■□□ 2.1
UBP1-205ENST00000456378 CWC27Q6UX04 472 aaKnown RBP28.2■■■□□ 2.1
UBP1-205ENST00000456378 MKL1Q969V6 931 aa28.2■■■□□ 2.1
UBP1-205ENST00000456378 UNC93B1Q9H1C4 597 aa28.2■■■□□ 2.1
UBP1-205ENST00000456378 FBXO28Q9NVF7 368 aa28.2■■■□□ 2.1
UBP1-205ENST00000456378 TNRC18O15417 2968 aaPredicted RBP28.2■■■□□ 2.1
UBP1-205ENST00000456378 F5H6K3 240 aa28.19■■■□□ 2.1
UBP1-205ENST00000456378 FGRP09769 529 aa28.19■■■□□ 2.1
UBP1-205ENST00000456378 CYP2B6P20813 491 aa28.19■■■□□ 2.1
UBP1-205ENST00000456378 CCNA1P78396 465 aa28.19■■■□□ 2.1
UBP1-205ENST00000456378 KLRC3Q07444 240 aa28.19■■■□□ 2.1
UBP1-205ENST00000456378 CCAR1Q8IX12 1150 aaKnown RBP28.19■■■□□ 2.1
UBP1-205ENST00000456378 NUP88Q99567 741 aaPredicted RBP28.19■■■□□ 2.1
UBP1-205ENST00000456378 NUDT12Q9BQG2 462 aa28.19■■■□□ 2.1
UBP1-205ENST00000456378 DIAPH3Q9NSV4 1193 aa28.19■■■□□ 2.1
UBP1-205ENST00000456378 A0A0G2JMZ2 1700 aa28.18■■■□□ 2.1
UBP1-205ENST00000456378 PARP14Q460N5 1801 aa28.18■■■□□ 2.1
UBP1-205ENST00000456378 NDUFB10O96000 172 aa28.18■■■□□ 2.1
UBP1-205ENST00000456378 MOV10L1Q9BXT6 1211 aaKnown RBP28.18■■■□□ 2.1
UBP1-205ENST00000456378 RNF208Q9H0X6 261 aa28.18■■■□□ 2.1
UBP1-205ENST00000456378 ADAMTS5Q9UNA0 930 aa28.18■■■□□ 2.1
UBP1-205ENST00000456378 ZMYM6O95789 1325 aa28.18■■■□□ 2.1
UBP1-205ENST00000456378 TTLL1O95922 423 aa28.17■■■□□ 2.1
UBP1-205ENST00000456378 TRIM32Q13049 653 aa28.17■■■□□ 2.1
UBP1-205ENST00000456378 SAMD1Q6SPF0 538 aaPredicted RBP28.17■■■□□ 2.1
UBP1-205ENST00000456378 SOCS4Q8WXH5 440 aa28.17■■■□□ 2.1
UBP1-205ENST00000456378 NBPF3Q9H094 633 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms