RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 RBPJLQ9UBG7 517 aa20.65■□□□□ 0.9
USP39-208ENST00000455732 PLIN4Q96Q06 1357 aa20.64■□□□□ 0.89
USP39-208ENST00000455732 USP17L15C9J2P7 530 aa20.64■□□□□ 0.89
USP39-208ENST00000455732 USP17L13C9JLJ4 530 aa20.64■□□□□ 0.89
USP39-208ENST00000455732 USP17L11C9JVI0 530 aa20.64■□□□□ 0.89
USP39-208ENST00000455732 USP17L18D6R9N7 530 aa20.64■□□□□ 0.89
USP39-208ENST00000455732 USP17L22D6RA61 530 aa20.64■□□□□ 0.89
USP39-208ENST00000455732 USP17L17D6RBQ6 530 aa20.64■□□□□ 0.89
USP39-208ENST00000455732 USP17L19D6RCP7 530 aa20.64■□□□□ 0.89
USP39-208ENST00000455732 USP17L20D6RJB6 530 aa20.64■□□□□ 0.89
USP39-208ENST00000455732 PEX10O60683 326 aa20.64■□□□□ 0.89
USP39-208ENST00000455732 HSPD1P10809 573 aaKnown RBP20.64■□□□□ 0.89
USP39-208ENST00000455732 USP17L24Q0WX57 530 aa20.64■□□□□ 0.89
USP39-208ENST00000455732 IRF5Q13568 498 aa20.64■□□□□ 0.89
USP39-208ENST00000455732 GTF3C2Q8WUA4 911 aaPredicted RBP20.64■□□□□ 0.89
USP39-208ENST00000455732 COA7Q96BR5 231 aa20.64■□□□□ 0.89
USP39-208ENST00000455732 ARHGEF10LQ9HCE6 1279 aa20.64■□□□□ 0.89
USP39-208ENST00000455732 ANAPC4Q9UJX5 808 aa20.64■□□□□ 0.89
USP39-208ENST00000455732 TMX2Q9Y320 296 aa20.64■□□□□ 0.89
USP39-208ENST00000455732 MYH4Q9Y623 1939 aa20.63■□□□□ 0.89
USP39-208ENST00000455732 PDE4BQ07343 736 aa20.63■□□□□ 0.89
USP39-208ENST00000455732 CLEC10AQ8IUN9 316 aa20.63■□□□□ 0.89
USP39-208ENST00000455732 GPRC5AQ8NFJ5 357 aa20.63■□□□□ 0.89
USP39-208ENST00000455732 LPAR1Q92633 364 aa20.63■□□□□ 0.89
USP39-208ENST00000455732 TMEM106CQ9BVX2 250 aa20.63■□□□□ 0.89
USP39-208ENST00000455732 EN2P19622 333 aaPredicted RBP20.62■□□□□ 0.89
USP39-208ENST00000455732 ERVK-9P63128 1117 aa20.62■□□□□ 0.89
USP39-208ENST00000455732 ERVK-24P63145 666 aa20.62■□□□□ 0.89
USP39-208ENST00000455732 MTFR1Q15390 333 aa20.62■□□□□ 0.89
USP39-208ENST00000455732 Q3C1V9 767 aa20.62■□□□□ 0.89
USP39-208ENST00000455732 KIAA1755Q5JYT7 1200 aa20.62■□□□□ 0.89
USP39-208ENST00000455732 CWC27Q6UX04 472 aaKnown RBP20.62■□□□□ 0.89
USP39-208ENST00000455732 LBX2Q6XYB7 198 aa20.62■□□□□ 0.89
USP39-208ENST00000455732 SLAIN1Q8ND83 568 aa20.62■□□□□ 0.89
USP39-208ENST00000455732 PXYLP1Q8TE99 480 aa20.62■□□□□ 0.89
USP39-208ENST00000455732 RPAP3Q9H6T3 665 aaPredicted RBP20.62■□□□□ 0.89
USP39-208ENST00000455732 GJD2Q9UKL4 321 aa20.62■□□□□ 0.89
USP39-208ENST00000455732 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.62■□□□□ 0.89
USP39-208ENST00000455732 A0A0G2JMZ2 1700 aa20.61■□□□□ 0.89
USP39-208ENST00000455732 IGKV6D-41A0A0C4DH26 115 aa20.61■□□□□ 0.89
USP39-208ENST00000455732 ADCY3O60266 1144 aa20.61■□□□□ 0.89
USP39-208ENST00000455732 MYCP01106 439 aaPredicted RBP20.61■□□□□ 0.89
USP39-208ENST00000455732 FGAP02671 866 aa20.61■□□□□ 0.89
USP39-208ENST00000455732 ZNF444Q8N0Y2 327 aaPredicted RBP20.61■□□□□ 0.89
USP39-208ENST00000455732 STK11IPQ8N1F8 1099 aa20.61■□□□□ 0.89
USP39-208ENST00000455732 VCPKMTQ9H867 229 aa20.61■□□□□ 0.89
USP39-208ENST00000455732 PRDM1O75626 825 aa20.6■□□□□ 0.89
USP39-208ENST00000455732 CNMDO75829 334 aa20.6■□□□□ 0.89
USP39-208ENST00000455732 EEF2P13639 858 aaKnown RBP20.6■□□□□ 0.89
USP39-208ENST00000455732 PAGR1Q9BTK6 254 aa20.6■□□□□ 0.89
USP39-208ENST00000455732 NYAP2Q9P242 653 aa20.6■□□□□ 0.89
USP39-208ENST00000455732 RABGAP1Q9Y3P9 1069 aa20.6■□□□□ 0.89
USP39-208ENST00000455732 COL11A1P12107 1806 aaPredicted RBP20.6■□□□□ 0.89
USP39-208ENST00000455732 RAD50Q92878 1312 aa20.59■□□□□ 0.89
USP39-208ENST00000455732 SPDYE16A6NNV3 312 aaPredicted RBP20.59■□□□□ 0.89
USP39-208ENST00000455732 FGRP09769 529 aa20.59■□□□□ 0.89
USP39-208ENST00000455732 ELNP15502 786 aa20.59■□□□□ 0.89
USP39-208ENST00000455732 NEDD1Q8NHV4 660 aa20.59■□□□□ 0.89
USP39-208ENST00000455732 PORCNQ9H237 461 aa20.59■□□□□ 0.89
USP39-208ENST00000455732 SYNPO2Q9UMS6 1093 aa20.59■□□□□ 0.89
USP39-208ENST00000455732 NEFLP07196 543 aa20.58■□□□□ 0.89
USP39-208ENST00000455732 UBXN2AP68543 259 aa20.58■□□□□ 0.89
USP39-208ENST00000455732 WDR46O15213 610 aaKnown RBP20.57■□□□□ 0.88
USP39-208ENST00000455732 ORC4O43929 436 aa20.57■□□□□ 0.88
USP39-208ENST00000455732 CCL5P13501 91 aa20.57■□□□□ 0.88
USP39-208ENST00000455732 MAPK4P31152 587 aa20.57■□□□□ 0.88
USP39-208ENST00000455732 CTDSPL2Q05D32 466 aa20.57■□□□□ 0.88
USP39-208ENST00000455732 COG2Q14746 738 aa20.57■□□□□ 0.88
USP39-208ENST00000455732 DSCC1Q9BVC3 393 aa20.57■□□□□ 0.88
USP39-208ENST00000455732 GOPCQ9HD26 462 aa20.57■□□□□ 0.88
USP39-208ENST00000455732 MTMR4Q9NYA4 1195 aa20.57■□□□□ 0.88
USP39-208ENST00000455732 BTBD7Q9P203 1132 aa20.57■□□□□ 0.88
USP39-208ENST00000455732 BIN2Q9UBW5 565 aaPredicted RBP20.57■□□□□ 0.88
USP39-208ENST00000455732 INHAP05111 366 aa20.56■□□□□ 0.88
USP39-208ENST00000455732 TSPY3P0CV98 308 aa20.56■□□□□ 0.88
USP39-208ENST00000455732 TSPY8P0CW00 308 aa20.56■□□□□ 0.88
USP39-208ENST00000455732 PCP11498 1178 aaKnown RBP20.56■□□□□ 0.88
USP39-208ENST00000455732 ATP2B2Q01814 1243 aa20.56■□□□□ 0.88
USP39-208ENST00000455732 PPP4R3BQ5MIZ7 849 aa20.56■□□□□ 0.88
USP39-208ENST00000455732 SPICE1Q8N0Z3 855 aa20.56■□□□□ 0.88
USP39-208ENST00000455732 MKL1Q969V6 931 aa20.56■□□□□ 0.88
USP39-208ENST00000455732 CEP95Q96GE4 821 aa20.56■□□□□ 0.88
USP39-208ENST00000455732 IL25Q9H293 177 aa20.56■□□□□ 0.88
USP39-208ENST00000455732 TACC3Q9Y6A5 838 aa20.56■□□□□ 0.88
USP39-208ENST00000455732 ZNFX1Q9P2E3 1918 aaKnown RBP20.55■□□□□ 0.88
USP39-208ENST00000455732 TTLL1O95922 423 aa20.55■□□□□ 0.88
USP39-208ENST00000455732 CENPBP07199 599 aaPredicted RBP20.55■□□□□ 0.88
USP39-208ENST00000455732 GJB1P08034 283 aa20.55■□□□□ 0.88
USP39-208ENST00000455732 CHMLP26374 656 aa20.55■□□□□ 0.88
USP39-208ENST00000455732 TFAP4Q01664 338 aa20.55■□□□□ 0.88
USP39-208ENST00000455732 GPR142Q7Z601 462 aa20.55■□□□□ 0.88
USP39-208ENST00000455732 RUFY2Q8WXA3 655 aa20.55■□□□□ 0.88
USP39-208ENST00000455732 USP6NLQ92738 828 aa20.55■□□□□ 0.88
USP39-208ENST00000455732 SHISA4Q96DD7 197 aa20.55■□□□□ 0.88
USP39-208ENST00000455732 CCDC136Q96JN2 1154 aa20.55■□□□□ 0.88
USP39-208ENST00000455732 TANGO6Q9C0B7 1094 aa20.55■□□□□ 0.88
USP39-208ENST00000455732 HOXC10Q9NYD6 342 aa20.55■□□□□ 0.88
USP39-208ENST00000455732 NT5C2P49902 561 aa20.54■□□□□ 0.88
USP39-208ENST00000455732 CCNA1P78396 465 aa20.54■□□□□ 0.88
USP39-208ENST00000455732 FAM47AQ5JRC9 791 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms