RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 PRUNE2Q8WUY3 3088 aa28.31■■■□□ 2.12
PTPRA-208ENST00000455631 CDH23Q9H251 3354 aa28.31■■■□□ 2.12
PTPRA-208ENST00000455631 NAV1Q8NEY1 1877 aa28.3■■■□□ 2.12
PTPRA-208ENST00000455631 IPO8O15397 1037 aaKnown RBP28.3■■■□□ 2.12
PTPRA-208ENST00000455631 STRNO43815 780 aa28.3■■■□□ 2.12
PTPRA-208ENST00000455631 ERCC3P19447 782 aa28.3■■■□□ 2.12
PTPRA-208ENST00000455631 SPATC1LQ9H0A9 340 aa28.3■■■□□ 2.12
PTPRA-208ENST00000455631 TLR7Q9NYK1 1049 aaKnown RBP28.3■■■□□ 2.12
PTPRA-208ENST00000455631 DBNLQ9UJU6 430 aaKnown RBP28.3■■■□□ 2.12
PTPRA-208ENST00000455631 TRIM43BA6NCK2 446 aa28.29■■■□□ 2.12
PTPRA-208ENST00000455631 GUCY1A2P33402 732 aa28.29■■■□□ 2.12
PTPRA-208ENST00000455631 POLA2Q14181 598 aa28.29■■■□□ 2.12
PTPRA-208ENST00000455631 COG2Q14746 738 aa28.29■■■□□ 2.12
PTPRA-208ENST00000455631 SEPT2Q15019 361 aa28.29■■■□□ 2.12
PTPRA-208ENST00000455631 FRAT1Q92837 279 aaPredicted RBP28.29■■■□□ 2.12
PTPRA-208ENST00000455631 CLUAP1Q96AJ1 413 aa28.29■■■□□ 2.12
PTPRA-208ENST00000455631 TRIM43Q96BQ3 446 aaPredicted RBP28.29■■■□□ 2.12
PTPRA-208ENST00000455631 COBLO75128 1261 aa28.28■■■□□ 2.12
PTPRA-208ENST00000455631 SURF6O75683 361 aaKnown RBP28.28■■■□□ 2.12
PTPRA-208ENST00000455631 PLCD1P51178 756 aa28.28■■■□□ 2.12
PTPRA-208ENST00000455631 LRRC41Q15345 812 aa28.28■■■□□ 2.12
PTPRA-208ENST00000455631 FAM47AQ5JRC9 791 aa28.28■■■□□ 2.12
PTPRA-208ENST00000455631 PRAMEF19Q5SWL8 479 aa28.28■■■□□ 2.12
PTPRA-208ENST00000455631 SHCBP1Q8NEM2 672 aa28.28■■■□□ 2.12
PTPRA-208ENST00000455631 SLC5A4Q9NY91 659 aa28.28■■■□□ 2.12
PTPRA-208ENST00000455631 SPTBN5Q9NRC6 3674 aaKnown RBP28.28■■■□□ 2.12
PTPRA-208ENST00000455631 PLS1Q14651 629 aa28.27■■■□□ 2.12
PTPRA-208ENST00000455631 RNPC3Q96LT9 517 aaKnown RBP28.27■■■□□ 2.12
PTPRA-208ENST00000455631 HOXC10Q9NYD6 342 aa28.27■■■□□ 2.12
PTPRA-208ENST00000455631 MPHOSPH10O00566 681 aaKnown RBP28.26■■■□□ 2.11
PTPRA-208ENST00000455631 POLR3DP05423 398 aaPredicted RBP28.26■■■□□ 2.11
PTPRA-208ENST00000455631 C1orf53Q5VUE5 145 aa28.26■■■□□ 2.11
PTPRA-208ENST00000455631 SYMPKQ92797 1274 aaKnown RBP28.26■■■□□ 2.11
PTPRA-208ENST00000455631 CCDC8Q9H0W5 538 aaPredicted RBP28.26■■■□□ 2.11
PTPRA-208ENST00000455631 A0A1W2PRG0 241 aa28.25■■■□□ 2.11
PTPRA-208ENST00000455631 TLE2Q04725 743 aa28.25■■■□□ 2.11
PTPRA-208ENST00000455631 NCAPG2Q86XI2 1143 aa28.25■■■□□ 2.11
PTPRA-208ENST00000455631 SSH3Q8TE77 659 aa28.25■■■□□ 2.11
PTPRA-208ENST00000455631 MAP3K12Q12852 859 aa28.24■■■□□ 2.11
PTPRA-208ENST00000455631 MROH8Q9H579 483 aa28.24■■■□□ 2.11
PTPRA-208ENST00000455631 ANTXR1Q9H6X2 564 aa28.24■■■□□ 2.11
PTPRA-208ENST00000455631 TMEM265A0A087WTH1 108 aa28.23■■■□□ 2.11
PTPRA-208ENST00000455631 BCAR3O75815 825 aa28.23■■■□□ 2.11
PTPRA-208ENST00000455631 CLTBP09497 229 aa28.23■■■□□ 2.11
PTPRA-208ENST00000455631 ITGB8P26012 769 aa28.23■■■□□ 2.11
PTPRA-208ENST00000455631 MB21D1Q8N884 522 aa28.23■■■□□ 2.11
PTPRA-208ENST00000455631 MAML3Q96JK9 1138 aa28.23■■■□□ 2.11
PTPRA-208ENST00000455631 TACC3Q9Y6A5 838 aa28.23■■■□□ 2.11
PTPRA-208ENST00000455631 ABRAQ8N0Z2 381 aa28.22■■■□□ 2.11
PTPRA-208ENST00000455631 XPNPEP3Q9NQH7 507 aa28.22■■■□□ 2.11
PTPRA-208ENST00000455631 PHF24Q9UPV7 400 aa28.22■■■□□ 2.11
PTPRA-208ENST00000455631 EPHB4P54760 987 aa28.21■■■□□ 2.11
PTPRA-208ENST00000455631 ATP8B2P98198 1209 aa28.21■■■□□ 2.11
PTPRA-208ENST00000455631 GABPAQ06546 454 aa28.21■■■□□ 2.11
PTPRA-208ENST00000455631 SAMD1Q6SPF0 538 aaPredicted RBP28.21■■■□□ 2.11
PTPRA-208ENST00000455631 TMEM57Q8N5G2 664 aa28.21■■■□□ 2.11
PTPRA-208ENST00000455631 EAF2Q96CJ1 260 aaPredicted RBP28.21■■■□□ 2.11
PTPRA-208ENST00000455631 RIOK1Q9BRS2 568 aaKnown RBP28.21■■■□□ 2.11
PTPRA-208ENST00000455631 C1orf115Q9H7X2 142 aa28.21■■■□□ 2.11
PTPRA-208ENST00000455631 FLOT1O75955 427 aa28.2■■■□□ 2.1
PTPRA-208ENST00000455631 RARBP10826 455 aa28.2■■■□□ 2.1
PTPRA-208ENST00000455631 RAG1P15918 1043 aa28.2■■■□□ 2.1
PTPRA-208ENST00000455631 EVX2Q03828 476 aa28.2■■■□□ 2.1
PTPRA-208ENST00000455631 ATG4CQ96DT6 458 aa28.2■■■□□ 2.1
PTPRA-208ENST00000455631 MYH8P13535 1937 aa28.2■■■□□ 2.1
PTPRA-208ENST00000455631 ZNFX1Q9P2E3 1918 aaKnown RBP28.2■■■□□ 2.1
PTPRA-208ENST00000455631 SMCHD1A6NHR9 2005 aa28.19■■■□□ 2.1
PTPRA-208ENST00000455631 MAGEB6P1A0A0J9YX57 407 aa28.19■■■□□ 2.1
PTPRA-208ENST00000455631 PQBP1O60828 265 aaKnown RBP28.19■■■□□ 2.1
PTPRA-208ENST00000455631 FCER1AP12319 257 aa28.19■■■□□ 2.1
PTPRA-208ENST00000455631 DSG3P32926 999 aa28.19■■■□□ 2.1
PTPRA-208ENST00000455631 KIAA1755Q5JYT7 1200 aa28.19■■■□□ 2.1
PTPRA-208ENST00000455631 TMED8Q6PL24 325 aaPredicted RBP28.19■■■□□ 2.1
PTPRA-208ENST00000455631 MCM9Q9NXL9 1143 aa28.19■■■□□ 2.1
PTPRA-208ENST00000455631 PARP14Q460N5 1801 aa28.19■■■□□ 2.1
PTPRA-208ENST00000455631 PGK1P00558 417 aa28.18■■■□□ 2.1
PTPRA-208ENST00000455631 FPGSQ05932 587 aa28.18■■■□□ 2.1
PTPRA-208ENST00000455631 RNF180Q86T96 592 aa28.18■■■□□ 2.1
PTPRA-208ENST00000455631 SPICE1Q8N0Z3 855 aa28.18■■■□□ 2.1
PTPRA-208ENST00000455631 KIAA0355O15063 1070 aa28.17■■■□□ 2.1
PTPRA-208ENST00000455631 GRIN2CQ14957 1233 aa28.17■■■□□ 2.1
PTPRA-208ENST00000455631 TMEM179Q6ZVK1 233 aa28.17■■■□□ 2.1
PTPRA-208ENST00000455631 USP38Q8NB14 1042 aa28.17■■■□□ 2.1
PTPRA-208ENST00000455631 CRNKL1Q9BZJ0 848 aaKnown RBP28.17■■■□□ 2.1
PTPRA-208ENST00000455631 NOP58Q9Y2X3 529 aaKnown RBP28.17■■■□□ 2.1
PTPRA-208ENST00000455631 COL11A1P12107 1806 aaPredicted RBP28.17■■■□□ 2.1
PTPRA-208ENST00000455631 PLXNA1Q9UIW2 1896 aa28.17■■■□□ 2.1
PTPRA-208ENST00000455631 A0A1W2PQ45 241 aaPredicted RBP28.16■■■□□ 2.1
PTPRA-208ENST00000455631 A0A1W2PQY0 241 aa28.16■■■□□ 2.1
PTPRA-208ENST00000455631 DNAJB2P25686 324 aa28.16■■■□□ 2.1
PTPRA-208ENST00000455631 TJAP1Q5JTD0 557 aa28.16■■■□□ 2.1
PTPRA-208ENST00000455631 CLEC10AQ8IUN9 316 aa28.16■■■□□ 2.1
PTPRA-208ENST00000455631 SLC44A5Q8NCS7 719 aa28.16■■■□□ 2.1
PTPRA-208ENST00000455631 MMP19Q99542 508 aa28.16■■■□□ 2.1
PTPRA-208ENST00000455631 TMEM39AQ9NV64 488 aa28.16■■■□□ 2.1
PTPRA-208ENST00000455631 NRBP1Q9UHY1 535 aa28.16■■■□□ 2.1
PTPRA-208ENST00000455631 ARHGEF10LQ9HCE6 1279 aa28.15■■■□□ 2.1
PTPRA-208ENST00000455631 ROBO3Q96MS0 1386 aa28.14■■■□□ 2.1
PTPRA-208ENST00000455631 PGK2P07205 417 aa28.14■■■□□ 2.1
PTPRA-208ENST00000455631 TMEM132BQ14DG7 1078 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms