RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 H7C1D1 291 aa11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 SH2B2O14492 632 aaPredicted RBP11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 ECM2O94769 699 aaPredicted RBP11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 MMP10P09238 476 aa11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 MECOMQ03112 1051 aa11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 IFFO1Q0D2I5 559 aa11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 CELF1Q92879 486 aaKnown RBP11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 MINPP1Q9UNW1 487 aa11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 IQGAP1P46940 1657 aa11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 USP17L8P0C7I0 530 aa11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 KRT9P35527 623 aa11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 GRM1Q13255 1194 aa11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 RAPGEF1Q13905 1077 aa11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 NEK8Q86SG6 692 aa11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 GOPCQ9HD26 462 aa11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 TAB2Q9NYJ8 693 aa11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 AFF2P51816 1311 aa11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 A0A1W2PQ27 194 aa11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 A0A1W2PQ64 194 aa11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 A0A1W2PQD8 194 aa11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 FOXO4P98177 505 aa11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 ZNF827Q17R98 1081 aa11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 SLFN13Q68D06 897 aa11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 BBXQ8WY36 941 aaPredicted RBP11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 FTOQ9C0B1 505 aaKnown RBP eCLIP11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 XPO4Q9C0E2 1151 aaKnown RBP11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 CCDC113Q9H0I3 377 aa11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 ARFGAP3Q9NP61 516 aa11.25□□□□□ -0.61
CSGALNACT1-203ENST00000454498 ERCC3P19447 782 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 C17orf53Q8N3J3 647 aaPredicted RBP11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 PLVAPQ9BX97 442 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 DIP2AQ14689 1571 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 DDX39AO00148 427 aaKnown RBP11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 NEBLO76041 1014 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 KIAA0754O94854 1291 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 PRDX5P30044 214 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 KIF23Q02241 960 aaPredicted RBP11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 BMS1Q14692 1282 aaKnown RBP11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 CCDC122Q5T0U0 273 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 GALNT17Q6IS24 598 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 KRBA2Q6ZNG9 492 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 FNBP4Q8N3X1 1017 aaPredicted RBP11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 AIFM3Q96NN9 605 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 TAOK3Q9H2K8 898 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 FOXP1Q9H334 677 aaPredicted RBP11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 RCOR1Q9UKL0 485 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 PCDHA12Q9UN75 941 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 FRMD4BQ9Y2L6 1034 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 PREX1Q8TCU6 1659 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 ZBED4O75132 1171 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 EPB41P11171 864 aaKnown RBP11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 GPR101Q96P66 508 aaPredicted RBP11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 POLR3EQ9NVU0 708 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 TBC1D7Q9P0N9 293 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 PCDHA5Q9Y5H7 936 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 DIP2BQ9P265 1576 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 FMNL1O95466 1100 aaPredicted RBP11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 OR52Z1P0C646 297 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 TECP42680 631 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 SOS2Q07890 1332 aaPredicted RBP11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 NR5A1Q13285 461 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 NELFBQ8WX92 580 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 FAM212AQ96EL1 285 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 PCDHA1Q9Y5I3 950 aa11.24□□□□□ -0.61
CSGALNACT1-203ENST00000454498 OVOS2A0A0G2JMS6 1433 aa11.23□□□□□ -0.61
CSGALNACT1-203ENST00000454498 ERICH4A6NGS2 130 aa11.23□□□□□ -0.61
CSGALNACT1-203ENST00000454498 CCDC169A6NNP5 214 aa11.23□□□□□ -0.61
CSGALNACT1-203ENST00000454498 TRIM14Q14142 442 aa11.23□□□□□ -0.61
CSGALNACT1-203ENST00000454498 TBC1D9BQ66K14 1250 aa11.23□□□□□ -0.61
CSGALNACT1-203ENST00000454498 ARHGEF1Q92888 912 aaKnown RBP11.23□□□□□ -0.61
CSGALNACT1-203ENST00000454498 IMPACTQ9P2X3 320 aa11.23□□□□□ -0.61
CSGALNACT1-203ENST00000454498 KIAA0753Q2KHM9 967 aa11.23□□□□□ -0.61
CSGALNACT1-203ENST00000454498 ABCB5Q2M3G0 1257 aa11.23□□□□□ -0.61
CSGALNACT1-203ENST00000454498 MAEAQ7L5Y9 396 aa11.23□□□□□ -0.61
CSGALNACT1-203ENST00000454498 NELFCDQ8IXH7 590 aa11.23□□□□□ -0.61
CSGALNACT1-203ENST00000454498 DYNLL2Q96FJ2 89 aa11.23□□□□□ -0.61
CSGALNACT1-203ENST00000454498 NT5C3AQ9H0P0 336 aa11.23□□□□□ -0.61
CSGALNACT1-203ENST00000454498 CEMIPQ8WUJ3 1361 aa11.23□□□□□ -0.61
CSGALNACT1-203ENST00000454498 ANKRD62A6NC57 917 aa11.23□□□□□ -0.61
CSGALNACT1-203ENST00000454498 GPATCH4Q5T3I0 446 aaKnown RBP11.23□□□□□ -0.61
CSGALNACT1-203ENST00000454498 FBXO11Q86XK2 927 aa11.23□□□□□ -0.61
CSGALNACT1-203ENST00000454498 CEP112Q8N8E3 955 aa11.23□□□□□ -0.61
CSGALNACT1-203ENST00000454498 LINC00301Q8NCQ3 95 aa11.23□□□□□ -0.61
CSGALNACT1-203ENST00000454498 ZNF408Q9H9D4 720 aa11.23□□□□□ -0.61
CSGALNACT1-203ENST00000454498 GOLGA6L10A0A0M3HER8 536 aa11.22□□□□□ -0.61
CSGALNACT1-203ENST00000454498 CLRN2A0PK11 232 aa11.22□□□□□ -0.61
CSGALNACT1-203ENST00000454498 SMTNP53814 917 aa11.22□□□□□ -0.61
CSGALNACT1-203ENST00000454498 RBM6P78332 1123 aaKnown RBP11.22□□□□□ -0.61
CSGALNACT1-203ENST00000454498 SCARF1Q14162 830 aa11.22□□□□□ -0.61
CSGALNACT1-203ENST00000454498 RASGRP4Q8TDF6 673 aa11.22□□□□□ -0.61
CSGALNACT1-203ENST00000454498 CSRNP1Q96S65 589 aa11.22□□□□□ -0.61
CSGALNACT1-203ENST00000454498 SELENOOQ9BVL4 669 aa11.22□□□□□ -0.61
CSGALNACT1-203ENST00000454498 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.22□□□□□ -0.61
CSGALNACT1-203ENST00000454498 SYNCQ9H7C4 482 aa11.22□□□□□ -0.61
CSGALNACT1-203ENST00000454498 FRMPD1Q5SYB0 1578 aa11.22□□□□□ -0.61
CSGALNACT1-203ENST00000454498 ARHGAP6O43182 974 aa11.22□□□□□ -0.61
CSGALNACT1-203ENST00000454498 TOB2Q14106 344 aaPredicted RBP11.22□□□□□ -0.61
CSGALNACT1-203ENST00000454498 PRR16Q569H4 304 aa11.22□□□□□ -0.61
CSGALNACT1-203ENST00000454498 CC2D2BQ6DHV5 1058 aa11.22□□□□□ -0.61
CSGALNACT1-203ENST00000454498 ATG9AQ7Z3C6 839 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms