RNA–Protein interactions for RNA: ENST00000453640.1

SSXP1-201, Transcript of SSX family pseudogene 1, humanhuman

BASIC

Gene SSXP1, Length 473 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP1-201ENST00000453640 NLRC3Q7RTR2 1065 aa6.37□□□□□ -1.39
SSXP1-201ENST00000453640 ATG4DQ86TL0 474 aaPredicted RBP6.37□□□□□ -1.39
SSXP1-201ENST00000453640 KRTAP9-2Q9BYQ4 174 aa6.37□□□□□ -1.39
SSXP1-201ENST00000453640 C19orf73Q9NVV2 129 aa6.37□□□□□ -1.39
SSXP1-201ENST00000453640 KCNH3Q9ULD8 1083 aa6.37□□□□□ -1.39
SSXP1-201ENST00000453640 CTNND2Q9UQB3 1225 aa6.37□□□□□ -1.39
SSXP1-201ENST00000453640 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.36□□□□□ -1.39
SSXP1-201ENST00000453640 NME1P15531 152 aaKnown RBP6.36□□□□□ -1.39
SSXP1-201ENST00000453640 PAK2Q13177 524 aa6.36□□□□□ -1.39
SSXP1-201ENST00000453640 NBPF12Q5TAG4 269 aaPredicted RBP6.36□□□□□ -1.39
SSXP1-201ENST00000453640 TMPRSS7Q7RTY8 843 aa6.36□□□□□ -1.39
SSXP1-201ENST00000453640 TSPYL5Q86VY4 417 aaPredicted RBP6.36□□□□□ -1.39
SSXP1-201ENST00000453640 NT5DC4Q86YG4 428 aa6.36□□□□□ -1.39
SSXP1-201ENST00000453640 CREG2Q8IUH2 290 aa6.36□□□□□ -1.39
SSXP1-201ENST00000453640 ZNF654Q8IZM8 581 aa6.36□□□□□ -1.39
SSXP1-201ENST00000453640 FLAD1Q8NFF5 587 aa6.36□□□□□ -1.39
SSXP1-201ENST00000453640 ZNRF3Q9ULT6 936 aa6.36□□□□□ -1.39
SSXP1-201ENST00000453640 CCDC9Q9Y3X0 531 aaKnown RBP6.36□□□□□ -1.39
SSXP1-201ENST00000453640 RNF114Q9Y508 228 aa6.36□□□□□ -1.39
SSXP1-201ENST00000453640 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.36□□□□□ -1.39
SSXP1-201ENST00000453640 TNFRSF10CO14798 259 aa6.35□□□□□ -1.39
SSXP1-201ENST00000453640 LRRFIP1Q32MZ4 808 aaKnown RBP6.35□□□□□ -1.39
SSXP1-201ENST00000453640 TMEM192Q8IY95 271 aa6.35□□□□□ -1.39
SSXP1-201ENST00000453640 ZNF428Q96B54 188 aa6.35□□□□□ -1.39
SSXP1-201ENST00000453640 SLC9A7Q96T83 725 aa6.35□□□□□ -1.39
SSXP1-201ENST00000453640 GPATCH2Q9NW75 528 aa6.35□□□□□ -1.39
SSXP1-201ENST00000453640 PPT2Q9UMR5 302 aa6.35□□□□□ -1.39
SSXP1-201ENST00000453640 DNAJC25-GNG10A0A024R161 153 aa6.34□□□□□ -1.39
SSXP1-201ENST00000453640 ACRP10323 421 aa6.34□□□□□ -1.39
SSXP1-201ENST00000453640 SNW1Q13573 536 aaKnown RBP6.34□□□□□ -1.39
SSXP1-201ENST00000453640 RALGPS1Q5JS13 557 aa6.34□□□□□ -1.39
SSXP1-201ENST00000453640 FYB2Q5VWT5 728 aa6.34□□□□□ -1.39
SSXP1-201ENST00000453640 ZNF512BQ96KM6 892 aaPredicted RBP6.34□□□□□ -1.39
SSXP1-201ENST00000453640 ALPK1Q96QP1 1244 aa6.34□□□□□ -1.39
SSXP1-201ENST00000453640 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.34□□□□□ -1.39
SSXP1-201ENST00000453640 TRIT1Q9H3H1 467 aaKnown RBP6.34□□□□□ -1.39
SSXP1-201ENST00000453640 GINM1Q9NU53 330 aa6.34□□□□□ -1.39
SSXP1-201ENST00000453640 SLAMF8Q9P0V8 285 aa6.34□□□□□ -1.39
SSXP1-201ENST00000453640 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.34□□□□□ -1.39
SSXP1-201ENST00000453640 KRTAP9-6A0A140TA67 174 aa6.33□□□□□ -1.4
SSXP1-201ENST00000453640 BIN1O00499 593 aa6.33□□□□□ -1.4
SSXP1-201ENST00000453640 RNF4P78317 190 aa6.33□□□□□ -1.4
SSXP1-201ENST00000453640 RAD51AP2Q09MP3 1159 aa6.33□□□□□ -1.4
SSXP1-201ENST00000453640 NBPF9Q3BBW0 867 aa6.33□□□□□ -1.4
SSXP1-201ENST00000453640 FAM168AQ92567 244 aa6.33□□□□□ -1.4
SSXP1-201ENST00000453640 ASIC4Q96FT7 647 aa6.33□□□□□ -1.4
SSXP1-201ENST00000453640 DUSP13Q9UII6 198 aa6.33□□□□□ -1.4
SSXP1-201ENST00000453640 PCDHA11Q9Y5I1 949 aa6.33□□□□□ -1.4
SSXP1-201ENST00000453640 FAM86C2PA6NEL3 165 aa6.32□□□□□ -1.4
SSXP1-201ENST00000453640 CLEC3AO75596 197 aa6.32□□□□□ -1.4
SSXP1-201ENST00000453640 GDNFP39905 211 aa6.32□□□□□ -1.4
SSXP1-201ENST00000453640 CCNFP41002 786 aa6.32□□□□□ -1.4
SSXP1-201ENST00000453640 CHMP4BP1P59074 171 aa6.32□□□□□ -1.4
SSXP1-201ENST00000453640 EGR3Q06889 387 aa6.32□□□□□ -1.4
SSXP1-201ENST00000453640 TMC3Q7Z5M5 1100 aa6.32□□□□□ -1.4
SSXP1-201ENST00000453640 SLC6A18Q96N87 628 aa6.32□□□□□ -1.4
SSXP1-201ENST00000453640 FERD3LQ96RJ6 166 aa6.32□□□□□ -1.4
SSXP1-201ENST00000453640 KRTAP4-12Q9BQ66 201 aa6.32□□□□□ -1.4
SSXP1-201ENST00000453640 ADAMTS10Q9H324 1103 aa6.32□□□□□ -1.4
SSXP1-201ENST00000453640 IMPDH2P12268 514 aa6.31□□□□□ -1.4
SSXP1-201ENST00000453640 NMIQ13287 307 aaPredicted RBP6.31□□□□□ -1.4
SSXP1-201ENST00000453640 INTS3Q68E01 1043 aaKnown RBP6.31□□□□□ -1.4
SSXP1-201ENST00000453640 CCDC81Q6ZN84 652 aa6.31□□□□□ -1.4
SSXP1-201ENST00000453640 RUFY4Q6ZNE9 571 aa6.31□□□□□ -1.4
SSXP1-201ENST00000453640 TTC6Q86TZ1 520 aa6.31□□□□□ -1.4
SSXP1-201ENST00000453640 RASGRP4Q8TDF6 673 aa6.31□□□□□ -1.4
SSXP1-201ENST00000453640 GPRASP2Q96D09 838 aa6.31□□□□□ -1.4
SSXP1-201ENST00000453640 HDAC8Q9BY41 377 aa6.31□□□□□ -1.4
SSXP1-201ENST00000453640 EFR3BQ9Y2G0 817 aa6.31□□□□□ -1.4
SSXP1-201ENST00000453640 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.3□□□□□ -1.4
SSXP1-201ENST00000453640 LTKP29376 864 aa6.3□□□□□ -1.4
SSXP1-201ENST00000453640 GJA8P48165 433 aa6.3□□□□□ -1.4
SSXP1-201ENST00000453640 SOX9P48436 509 aa6.3□□□□□ -1.4
SSXP1-201ENST00000453640 ERVFC1P60507 584 aa6.3□□□□□ -1.4
SSXP1-201ENST00000453640 ZYXQ15942 572 aaKnown RBP6.3□□□□□ -1.4
SSXP1-201ENST00000453640 FBXW10Q5XX13 1052 aa6.3□□□□□ -1.4
SSXP1-201ENST00000453640 LSRQ86X29 649 aaPredicted RBP6.3□□□□□ -1.4
SSXP1-201ENST00000453640 ZSWIM9Q86XI8 627 aa6.3□□□□□ -1.4
SSXP1-201ENST00000453640 TAB3Q8N5C8 712 aaPredicted RBP6.3□□□□□ -1.4
SSXP1-201ENST00000453640 RBBP8NLQ8NC74 664 aaPredicted RBP6.3□□□□□ -1.4
SSXP1-201ENST00000453640 SYTL5Q8TDW5 730 aaPredicted RBP6.3□□□□□ -1.4
SSXP1-201ENST00000453640 PRDM14Q9GZV8 571 aa6.3□□□□□ -1.4
SSXP1-201ENST00000453640 ACBD3Q9H3P7 528 aa6.3□□□□□ -1.4
SSXP1-201ENST00000453640 TMEM59LQ9UK28 342 aa6.3□□□□□ -1.4
SSXP1-201ENST00000453640 ZNF503-AS2A6NEH8 195 aa6.29□□□□□ -1.4
SSXP1-201ENST00000453640 C9IYK1 514 aa6.29□□□□□ -1.4
SSXP1-201ENST00000453640 AFMP43652 599 aa6.29□□□□□ -1.4
SSXP1-201ENST00000453640 HK2P52789 917 aa6.29□□□□□ -1.4
SSXP1-201ENST00000453640 TEKQ02763 1124 aa6.29□□□□□ -1.4
SSXP1-201ENST00000453640 COL9A2Q14055 689 aaPredicted RBP6.29□□□□□ -1.4
SSXP1-201ENST00000453640 CLEC16AQ2KHT3 1053 aa6.29□□□□□ -1.4
SSXP1-201ENST00000453640 OGFOD2Q6N063 350 aa6.29□□□□□ -1.4
SSXP1-201ENST00000453640 KRTAP19-1Q8IUB9 90 aa6.29□□□□□ -1.4
SSXP1-201ENST00000453640 ENOX1Q8TC92 643 aaKnown RBP6.29□□□□□ -1.4
SSXP1-201ENST00000453640 TM9SF2Q99805 663 aa6.29□□□□□ -1.4
SSXP1-201ENST00000453640 TGIF2Q9GZN2 237 aa6.29□□□□□ -1.4
SSXP1-201ENST00000453640 SP110Q9HB58 689 aa6.29□□□□□ -1.4
SSXP1-201ENST00000453640 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.29□□□□□ -1.4
SSXP1-201ENST00000453640 SUCOQ9UBS9 1254 aaKnown RBP6.29□□□□□ -1.4
SSXP1-201ENST00000453640 EBF1Q9UH73 591 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms