RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 RHBDL3P58872 404 aa13.49□□□□□ -0.25
VTA1-203ENST00000452973 NLRP12P59046 1061 aa13.49□□□□□ -0.25
VTA1-203ENST00000452973 HOMER1Q86YM7 354 aa13.49□□□□□ -0.25
VTA1-203ENST00000452973 SLF2Q8IX21 1173 aa13.49□□□□□ -0.25
VTA1-203ENST00000452973 CERS5Q8N5B7 392 aa13.49□□□□□ -0.25
VTA1-203ENST00000452973 AKT1S1Q96B36 256 aa13.49□□□□□ -0.25
VTA1-203ENST00000452973 PCDHA5Q9Y5H7 936 aa13.49□□□□□ -0.25
VTA1-203ENST00000452973 KLRG2A4D1S0 409 aaPredicted RBP13.49□□□□□ -0.25
VTA1-203ENST00000452973 LMOD1P29536 600 aaPredicted RBP13.49□□□□□ -0.25
VTA1-203ENST00000452973 MCM7P33993 719 aa13.49□□□□□ -0.25
VTA1-203ENST00000452973 NOLC1Q14978 699 aaKnown RBP eCLIP13.49□□□□□ -0.25
VTA1-203ENST00000452973 HSP90AA4PQ58FG1 418 aa13.49□□□□□ -0.25
VTA1-203ENST00000452973 TMED8Q6PL24 325 aaPredicted RBP13.49□□□□□ -0.25
VTA1-203ENST00000452973 HEATR3Q7Z4Q2 680 aa13.49□□□□□ -0.25
VTA1-203ENST00000452973 FOXP4Q8IVH2 680 aaPredicted RBP13.49□□□□□ -0.25
VTA1-203ENST00000452973 EPSTI1Q96J88 318 aa13.49□□□□□ -0.25
VTA1-203ENST00000452973 PLCG2P16885 1265 aa13.48□□□□□ -0.25
VTA1-203ENST00000452973 NPY5RQ15761 445 aa13.48□□□□□ -0.25
VTA1-203ENST00000452973 PFKFB3Q16875 520 aaPredicted RBP13.48□□□□□ -0.25
VTA1-203ENST00000452973 CCDC144BQ3MJ40 725 aa13.48□□□□□ -0.25
VTA1-203ENST00000452973 ZNF772Q68DY9 489 aaPredicted RBP13.48□□□□□ -0.25
VTA1-203ENST00000452973 VWA3AA6NCI4 1184 aa13.48□□□□□ -0.25
VTA1-203ENST00000452973 SMC2O95347 1197 aa13.48□□□□□ -0.25
VTA1-203ENST00000452973 ALDH1B1P30837 517 aa13.48□□□□□ -0.25
VTA1-203ENST00000452973 PDE6BP35913 854 aa13.48□□□□□ -0.25
VTA1-203ENST00000452973 DHX58Q96C10 678 aa13.48□□□□□ -0.25
VTA1-203ENST00000452973 TIGD1Q96MW7 591 aa13.48□□□□□ -0.25
VTA1-203ENST00000452973 COA1Q9GZY4 146 aa13.48□□□□□ -0.25
VTA1-203ENST00000452973 ZNF287Q9HBT7 754 aa13.48□□□□□ -0.25
VTA1-203ENST00000452973 MAD2L2Q9UI95 211 aa13.48□□□□□ -0.25
VTA1-203ENST00000452973 SRPRBQ9Y5M8 271 aaKnown RBP13.48□□□□□ -0.25
VTA1-203ENST00000452973 PLSCR1O15162 318 aa13.48□□□□□ -0.25
VTA1-203ENST00000452973 SLURP2P0DP57 97 aa13.48□□□□□ -0.25
VTA1-203ENST00000452973 PTGDRQ13258 359 aa13.48□□□□□ -0.25
VTA1-203ENST00000452973 ARID5BQ14865 1188 aa13.48□□□□□ -0.25
VTA1-203ENST00000452973 TTC38Q5R3I4 469 aa13.48□□□□□ -0.25
VTA1-203ENST00000452973 USP17L2Q6R6M4 530 aa13.48□□□□□ -0.25
VTA1-203ENST00000452973 CLEC10AQ8IUN9 316 aa13.48□□□□□ -0.25
VTA1-203ENST00000452973 KIAA1551Q9HCM1 1747 aa13.48□□□□□ -0.25
VTA1-203ENST00000452973 PRR29P0C7W0 189 aa13.47□□□□□ -0.25
VTA1-203ENST00000452973 AFMP43652 599 aa13.47□□□□□ -0.25
VTA1-203ENST00000452973 CEP95Q96GE4 821 aa13.47□□□□□ -0.25
VTA1-203ENST00000452973 KLRF2D3W0D1 207 aa13.47□□□□□ -0.25
VTA1-203ENST00000452973 USP40Q9NVE5 1235 aa13.47□□□□□ -0.25
VTA1-203ENST00000452973 MAST2Q6P0Q8 1798 aa13.47□□□□□ -0.25
VTA1-203ENST00000452973 CYTH3O43739 400 aa13.46□□□□□ -0.25
VTA1-203ENST00000452973 RXRBP28702 533 aa13.46□□□□□ -0.25
VTA1-203ENST00000452973 CASP1P29466 404 aa13.46□□□□□ -0.25
VTA1-203ENST00000452973 CHRNA5P30532 468 aa13.46□□□□□ -0.25
VTA1-203ENST00000452973 RBM5P52756 815 aaKnown RBP eCLIP13.46□□□□□ -0.25
VTA1-203ENST00000452973 CACNB3P54284 484 aa13.46□□□□□ -0.25
VTA1-203ENST00000452973 TYW1BQ6NUM6 668 aa13.46□□□□□ -0.25
VTA1-203ENST00000452973 C16orf86Q6ZW13 317 aa13.46□□□□□ -0.25
VTA1-203ENST00000452973 C2CD5Q86YS7 1000 aa13.46□□□□□ -0.25
VTA1-203ENST00000452973 STAMQ92783 540 aa13.46□□□□□ -0.25
VTA1-203ENST00000452973 ATP2B2Q01814 1243 aa13.46□□□□□ -0.25
VTA1-203ENST00000452973 POSTNQ15063 836 aa13.46□□□□□ -0.25
VTA1-203ENST00000452973 TMC4Q7Z404 712 aa13.46□□□□□ -0.25
VTA1-203ENST00000452973 KIAA0825Q8IV33 1275 aa13.46□□□□□ -0.25
VTA1-203ENST00000452973 MASTLQ96GX5 879 aa13.46□□□□□ -0.25
VTA1-203ENST00000452973 DDX4Q9NQI0 724 aaKnown RBP13.46□□□□□ -0.25
VTA1-203ENST00000452973 IFNKQ9P0W0 207 aa13.46□□□□□ -0.25
VTA1-203ENST00000452973 LAMB1P07942 1786 aa13.46□□□□□ -0.25
VTA1-203ENST00000452973 GRM4Q14833 912 aa13.46□□□□□ -0.26
VTA1-203ENST00000452973 SLC35G1Q2M3R5 365 aa13.46□□□□□ -0.26
VTA1-203ENST00000452973 UBE2Q2Q8WVN8 375 aa13.46□□□□□ -0.26
VTA1-203ENST00000452973 SYMPKQ92797 1274 aaKnown RBP13.46□□□□□ -0.26
VTA1-203ENST00000452973 UBA5Q9GZZ9 404 aa13.46□□□□□ -0.26
VTA1-203ENST00000452973 FAM205AQ6ZU69 1335 aa13.46□□□□□ -0.26
VTA1-203ENST00000452973 RAD21O60216 631 aa13.45□□□□□ -0.26
VTA1-203ENST00000452973 TPM3P06753 285 aa13.45□□□□□ -0.26
VTA1-203ENST00000452973 ATP1A3P13637 1013 aa13.45□□□□□ -0.26
VTA1-203ENST00000452973 CDC25AP30304 524 aa13.45□□□□□ -0.26
VTA1-203ENST00000452973 BLIDQ8IZY5 108 aa13.45□□□□□ -0.26
VTA1-203ENST00000452973 CACTINQ8WUQ7 758 aaKnown RBP13.45□□□□□ -0.26
VTA1-203ENST00000452973 HOOK1Q9UJC3 728 aaKnown RBP13.45□□□□□ -0.26
VTA1-203ENST00000452973 TUBE1Q9UJT0 475 aa13.45□□□□□ -0.26
VTA1-203ENST00000452973 PCDHAC2Q9Y5I4 1007 aa13.45□□□□□ -0.26
VTA1-203ENST00000452973 FRMPD2Q68DX3 1309 aaPredicted RBP13.45□□□□□ -0.26
VTA1-203ENST00000452973 A0A087X0B3 334 aa13.45□□□□□ -0.26
VTA1-203ENST00000452973 TPM4P67936 248 aa13.45□□□□□ -0.26
VTA1-203ENST00000452973 TCP10Q12799 353 aa13.45□□□□□ -0.26
VTA1-203ENST00000452973 PTPN21Q16825 1174 aa13.45□□□□□ -0.26
VTA1-203ENST00000452973 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.45□□□□□ -0.26
VTA1-203ENST00000452973 LRRC47Q8N1G4 583 aaKnown RBP13.45□□□□□ -0.26
VTA1-203ENST00000452973 TNFRSF25Q93038 417 aa13.45□□□□□ -0.26
VTA1-203ENST00000452973 FAM163AQ96GL9 167 aaPredicted RBP13.45□□□□□ -0.26
VTA1-203ENST00000452973 GAKO14976 1311 aa13.45□□□□□ -0.26
VTA1-203ENST00000452973 ROBO3Q96MS0 1386 aa13.45□□□□□ -0.26
VTA1-203ENST00000452973 FAM237AA0A1B0GTK4 181 aa13.44□□□□□ -0.26
VTA1-203ENST00000452973 MPHOSPH10O00566 681 aaKnown RBP13.44□□□□□ -0.26
VTA1-203ENST00000452973 WWC2Q6AWC2 1192 aa13.44□□□□□ -0.26
VTA1-203ENST00000452973 SARM1Q6SZW1 724 aa13.44□□□□□ -0.26
VTA1-203ENST00000452973 CERS3Q8IU89 383 aa13.44□□□□□ -0.26
VTA1-203ENST00000452973 KIAA1524Q8TCG1 905 aa13.44□□□□□ -0.26
VTA1-203ENST00000452973 XPO4Q9C0E2 1151 aaKnown RBP13.44□□□□□ -0.26
VTA1-203ENST00000452973 PARP1P09874 1014 aaKnown RBP13.44□□□□□ -0.26
VTA1-203ENST00000452973 GNAQP50148 359 aa13.44□□□□□ -0.26
VTA1-203ENST00000452973 CCDC178Q5BJE1 867 aa13.44□□□□□ -0.26
VTA1-203ENST00000452973 NEDD1Q8NHV4 660 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms