RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 ZNF532Q9HCE3 1301 aa13.18□□□□□ -0.3
USP1-204ENST00000452143 SOX1O00570 391 aaPredicted RBP13.18□□□□□ -0.3
USP1-204ENST00000452143 PTPREP23469 700 aa13.18□□□□□ -0.3
USP1-204ENST00000452143 CCND3P30281 292 aaPredicted RBP13.18□□□□□ -0.3
USP1-204ENST00000452143 GUCY1A2P33402 732 aa13.18□□□□□ -0.3
USP1-204ENST00000452143 MFSD14CQ5VZR4 134 aa13.18□□□□□ -0.3
USP1-204ENST00000452143 RPAP2Q8IXW5 612 aaPredicted RBP13.18□□□□□ -0.3
USP1-204ENST00000452143 SWAP70Q9UH65 585 aa13.18□□□□□ -0.3
USP1-204ENST00000452143 ZMYND8Q9ULU4 1186 aaPredicted RBP13.18□□□□□ -0.3
USP1-204ENST00000452143 DDX19BQ9UMR2 479 aa13.18□□□□□ -0.3
USP1-204ENST00000452143 TCRBV5S4A2TA0A5A2 114 aa13.17□□□□□ -0.3
USP1-204ENST00000452143 GOLIM4O00461 696 aa13.17□□□□□ -0.3
USP1-204ENST00000452143 IFIT2P09913 472 aaKnown RBP13.17□□□□□ -0.3
USP1-204ENST00000452143 MAGEA10P43363 369 aaPredicted RBP13.17□□□□□ -0.3
USP1-204ENST00000452143 SEPT2Q15019 361 aa13.17□□□□□ -0.3
USP1-204ENST00000452143 LRIT3Q3SXY7 679 aa13.17□□□□□ -0.3
USP1-204ENST00000452143 WDR78Q5VTH9 848 aa13.17□□□□□ -0.3
USP1-204ENST00000452143 TMEM179Q6ZVK1 233 aa13.17□□□□□ -0.3
USP1-204ENST00000452143 TDHQ8IZJ6 230 aa13.17□□□□□ -0.3
USP1-204ENST00000452143 LPAR1Q92633 364 aa13.17□□□□□ -0.3
USP1-204ENST00000452143 LRCH3Q96II8 777 aa13.17□□□□□ -0.3
USP1-204ENST00000452143 DCP1AQ9NPI6 582 aaPredicted RBP13.17□□□□□ -0.3
USP1-204ENST00000452143 PLSCR2Q9NRY7 297 aa13.17□□□□□ -0.3
USP1-204ENST00000452143 BTBD7Q9P203 1132 aa13.17□□□□□ -0.3
USP1-204ENST00000452143 A0A0C4DFX4 3053 aa13.16□□□□□ -0.3
USP1-204ENST00000452143 MPHOSPH10O00566 681 aaKnown RBP13.16□□□□□ -0.3
USP1-204ENST00000452143 RAB11FIP3O75154 756 aa13.16□□□□□ -0.3
USP1-204ENST00000452143 COG2Q14746 738 aa13.16□□□□□ -0.3
USP1-204ENST00000452143 LCORLQ8N3X6 602 aa13.16□□□□□ -0.3
USP1-204ENST00000452143 MB21D1Q8N884 522 aa13.16□□□□□ -0.3
USP1-204ENST00000452143 SDR42E1Q8WUS8 393 aa13.16□□□□□ -0.3
USP1-204ENST00000452143 DNAJC2Q99543 621 aaKnown RBP13.16□□□□□ -0.3
USP1-204ENST00000452143 CHMP4BQ9H444 224 aaKnown RBP13.16□□□□□ -0.3
USP1-204ENST00000452143 SH2D4AQ9H788 454 aa13.16□□□□□ -0.3
USP1-204ENST00000452143 HOXC10Q9NYD6 342 aa13.16□□□□□ -0.3
USP1-204ENST00000452143 FLRT1Q9NZU1 646 aa13.16□□□□□ -0.3
USP1-204ENST00000452143 DDX20Q9UHI6 824 aaKnown RBP13.16□□□□□ -0.3
USP1-204ENST00000452143 LAMA2P24043 3122 aaKnown RBP13.16□□□□□ -0.3
USP1-204ENST00000452143 COL11A1P12107 1806 aaPredicted RBP13.16□□□□□ -0.3
USP1-204ENST00000452143 LTBP2Q14767 1821 aa13.16□□□□□ -0.3
USP1-204ENST00000452143 A0A1W2PRG0 241 aa13.15□□□□□ -0.3
USP1-204ENST00000452143 STRNO43815 780 aa13.15□□□□□ -0.3
USP1-204ENST00000452143 SYN1P17600 705 aa13.15□□□□□ -0.3
USP1-204ENST00000452143 ATP2B2Q01814 1243 aa13.15□□□□□ -0.3
USP1-204ENST00000452143 OLFML2BQ68BL8 750 aa13.15□□□□□ -0.3
USP1-204ENST00000452143 MIER1Q8N108 512 aa13.15□□□□□ -0.3
USP1-204ENST00000452143 SHCBP1Q8NEM2 672 aa13.15□□□□□ -0.3
USP1-204ENST00000452143 TANGO6Q9C0B7 1094 aa13.15□□□□□ -0.3
USP1-204ENST00000452143 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.15□□□□□ -0.3
USP1-204ENST00000452143 ARHGEF10LQ9HCE6 1279 aa13.15□□□□□ -0.3
USP1-204ENST00000452143 ATP8A2Q9NTI2 1148 aa13.15□□□□□ -0.3
USP1-204ENST00000452143 ZBTB40Q9NUA8 1239 aa13.15□□□□□ -0.3
USP1-204ENST00000452143 PAG1Q9NWQ8 432 aa13.15□□□□□ -0.3
USP1-204ENST00000452143 GREB1LQ9C091 1923 aaPredicted RBP13.15□□□□□ -0.3
USP1-204ENST00000452143 APBB1O00213 710 aa13.14□□□□□ -0.31
USP1-204ENST00000452143 DNM1LO00429 736 aa13.14□□□□□ -0.31
USP1-204ENST00000452143 IGHA2P01877 340 aa13.14□□□□□ -0.31
USP1-204ENST00000452143 PRR29P0C7W0 189 aa13.14□□□□□ -0.31
USP1-204ENST00000452143 CYBAP13498 195 aa13.14□□□□□ -0.31
USP1-204ENST00000452143 ADD2P35612 726 aa13.14□□□□□ -0.31
USP1-204ENST00000452143 LRRC26Q2I0M4 334 aa13.14□□□□□ -0.31
USP1-204ENST00000452143 AMOTL1Q8IY63 956 aa13.14□□□□□ -0.31
USP1-204ENST00000452143 MOV10L1Q9BXT6 1211 aaKnown RBP13.14□□□□□ -0.31
USP1-204ENST00000452143 UBE2OQ9C0C9 1292 aaKnown RBP13.14□□□□□ -0.31
USP1-204ENST00000452143 SPATC1LQ9H0A9 340 aa13.14□□□□□ -0.31
USP1-204ENST00000452143 PLXNA1Q9UIW2 1896 aa13.14□□□□□ -0.31
USP1-204ENST00000452143 ATP5JP18859 108 aa13.13□□□□□ -0.31
USP1-204ENST00000452143 ADORA2AP29274 412 aa13.13□□□□□ -0.31
USP1-204ENST00000452143 CYP2C19P33261 490 aa13.13□□□□□ -0.31
USP1-204ENST00000452143 ICA1Q05084 483 aa13.13□□□□□ -0.31
USP1-204ENST00000452143 MKRN4PQ13434 485 aaPredicted RBP13.13□□□□□ -0.31
USP1-204ENST00000452143 DPP9Q86TI2 863 aa13.13□□□□□ -0.31
USP1-204ENST00000452143 SIRT2Q8IXJ6 389 aa13.13□□□□□ -0.31
USP1-204ENST00000452143 ABRAQ8N0Z2 381 aa13.13□□□□□ -0.31
USP1-204ENST00000452143 SLC44A5Q8NCS7 719 aa13.13□□□□□ -0.31
USP1-204ENST00000452143 NPLOC4Q8TAT6 608 aa13.13□□□□□ -0.31
USP1-204ENST00000452143 DDRGK1Q96HY6 314 aa13.13□□□□□ -0.31
USP1-204ENST00000452143 CCDC17Q96LX7 622 aa13.13□□□□□ -0.31
USP1-204ENST00000452143 MROH8Q9H579 483 aa13.13□□□□□ -0.31
USP1-204ENST00000452143 ARMT1Q9H993 441 aa13.13□□□□□ -0.31
USP1-204ENST00000452143 SLC5A4Q9NY91 659 aa13.13□□□□□ -0.31
USP1-204ENST00000452143 TMX2Q9Y320 296 aa13.13□□□□□ -0.31
USP1-204ENST00000452143 ZNFX1Q9P2E3 1918 aaKnown RBP13.13□□□□□ -0.31
USP1-204ENST00000452143 WDR46O15213 610 aaKnown RBP13.12□□□□□ -0.31
USP1-204ENST00000452143 FLOT1O75955 427 aa13.12□□□□□ -0.31
USP1-204ENST00000452143 MBD4O95243 580 aa13.12□□□□□ -0.31
USP1-204ENST00000452143 CYP2D6P10635 497 aa13.12□□□□□ -0.31
USP1-204ENST00000452143 ERCC3P19447 782 aa13.12□□□□□ -0.31
USP1-204ENST00000452143 CNGA1P29973 690 aa13.12□□□□□ -0.31
USP1-204ENST00000452143 UBE3CQ15386 1083 aa13.12□□□□□ -0.31
USP1-204ENST00000452143 HAUS7Q99871 368 aa13.12□□□□□ -0.31
USP1-204ENST00000452143 VCPKMTQ9H867 229 aa13.12□□□□□ -0.31
USP1-204ENST00000452143 COG6Q9Y2V7 657 aa13.12□□□□□ -0.31
USP1-204ENST00000452143 ROBO3Q96MS0 1386 aa13.11□□□□□ -0.31
USP1-204ENST00000452143 AKR1B1P15121 316 aa13.11□□□□□ -0.31
USP1-204ENST00000452143 C12orf60Q5U649 245 aa13.11□□□□□ -0.31
USP1-204ENST00000452143 DIEXFQ68CQ4 756 aaKnown RBP13.11□□□□□ -0.31
USP1-204ENST00000452143 ZSCAN25Q6NSZ9 544 aa13.11□□□□□ -0.31
USP1-204ENST00000452143 C16orf86Q6ZW13 317 aa13.11□□□□□ -0.31
USP1-204ENST00000452143 SENP6Q9GZR1 1112 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms