RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 TRDNQ13061 729 aa10.49□□□□□ -0.73
COL8A1-203ENST00000452013 DGKZQ13574 1117 aa10.49□□□□□ -0.73
COL8A1-203ENST00000452013 COG2Q14746 738 aa10.49□□□□□ -0.73
COL8A1-203ENST00000452013 TNS4Q8IZW8 715 aa10.49□□□□□ -0.73
COL8A1-203ENST00000452013 CEP95Q96GE4 821 aa10.49□□□□□ -0.73
COL8A1-203ENST00000452013 TTC14Q96N46 770 aa10.49□□□□□ -0.73
COL8A1-203ENST00000452013 KRT23Q9C075 422 aa10.49□□□□□ -0.73
COL8A1-203ENST00000452013 RPAP3Q9H6T3 665 aaPredicted RBP10.49□□□□□ -0.73
COL8A1-203ENST00000452013 CNNM2Q9H8M5 875 aa10.49□□□□□ -0.73
COL8A1-203ENST00000452013 EFCC1Q9HA90 598 aa10.49□□□□□ -0.73
COL8A1-203ENST00000452013 TCP11L1Q9NUJ3 509 aa10.49□□□□□ -0.73
COL8A1-203ENST00000452013 WDR46O15213 610 aaKnown RBP10.48□□□□□ -0.73
COL8A1-203ENST00000452013 FMNL1O95466 1100 aaPredicted RBP10.48□□□□□ -0.73
COL8A1-203ENST00000452013 BCRP11274 1271 aa10.48□□□□□ -0.73
COL8A1-203ENST00000452013 HERVK_113P62684 666 aa10.48□□□□□ -0.73
COL8A1-203ENST00000452013 GPRC5AQ8NFJ5 357 aa10.48□□□□□ -0.73
COL8A1-203ENST00000452013 CD99L2Q8TCZ2 262 aa10.48□□□□□ -0.73
COL8A1-203ENST00000452013 IL25Q9H293 177 aa10.48□□□□□ -0.73
COL8A1-203ENST00000452013 STX8Q9UNK0 236 aa10.48□□□□□ -0.73
COL8A1-203ENST00000452013 TRIM17Q9Y577 477 aa10.48□□□□□ -0.73
COL8A1-203ENST00000452013 PSMC4P43686 418 aa10.47□□□□□ -0.73
COL8A1-203ENST00000452013 PRMT2P55345 433 aa10.47□□□□□ -0.73
COL8A1-203ENST00000452013 FCGRTP55899 365 aa10.47□□□□□ -0.73
COL8A1-203ENST00000452013 LACTBP83111 547 aaPredicted RBP10.47□□□□□ -0.73
COL8A1-203ENST00000452013 FAM110CQ1W6H9 321 aa10.47□□□□□ -0.73
COL8A1-203ENST00000452013 IQCA1Q86XH1 822 aa10.47□□□□□ -0.73
COL8A1-203ENST00000452013 CLEC10AQ8IUN9 316 aa10.47□□□□□ -0.73
COL8A1-203ENST00000452013 TBC1D10CQ8IV04 446 aa10.47□□□□□ -0.73
COL8A1-203ENST00000452013 CCAR1Q8IX12 1150 aaKnown RBP10.47□□□□□ -0.73
COL8A1-203ENST00000452013 SPICE1Q8N0Z3 855 aa10.47□□□□□ -0.73
COL8A1-203ENST00000452013 ANKRD13CQ8N6S4 541 aa10.47□□□□□ -0.73
COL8A1-203ENST00000452013 GMCL1P1Q8NEA9 526 aa10.47□□□□□ -0.73
COL8A1-203ENST00000452013 TANGO6Q9C0B7 1094 aa10.47□□□□□ -0.73
COL8A1-203ENST00000452013 ANO2Q9NQ90 1003 aa10.47□□□□□ -0.73
COL8A1-203ENST00000452013 IL17RBQ9NRM6 502 aa10.47□□□□□ -0.73
COL8A1-203ENST00000452013 MORF4L1Q9UBU8 362 aa10.47□□□□□ -0.73
COL8A1-203ENST00000452013 RABGAP1Q9Y3P9 1069 aa10.47□□□□□ -0.73
COL8A1-203ENST00000452013 TACC3Q9Y6A5 838 aa10.47□□□□□ -0.73
COL8A1-203ENST00000452013 ADGRA2Q96PE1 1338 aa10.47□□□□□ -0.73
COL8A1-203ENST00000452013 MYO5AQ9Y4I1 1855 aaKnown RBP10.47□□□□□ -0.73
COL8A1-203ENST00000452013 KDM4AO75164 1064 aa10.46□□□□□ -0.73
COL8A1-203ENST00000452013 FLOT1O75955 427 aa10.46□□□□□ -0.73
COL8A1-203ENST00000452013 TOP1P11387 765 aaKnown RBP10.46□□□□□ -0.73
COL8A1-203ENST00000452013 DSG3P32926 999 aa10.46□□□□□ -0.73
COL8A1-203ENST00000452013 NOVP48745 357 aa10.46□□□□□ -0.73
COL8A1-203ENST00000452013 CCNA1P78396 465 aa10.46□□□□□ -0.73
COL8A1-203ENST00000452013 KIAA1755Q5JYT7 1200 aa10.46□□□□□ -0.73
COL8A1-203ENST00000452013 RNF20Q5VTR2 975 aa10.46□□□□□ -0.73
COL8A1-203ENST00000452013 SLFN13Q68D06 897 aa10.46□□□□□ -0.73
COL8A1-203ENST00000452013 FBXO46Q6PJ61 603 aaPredicted RBP10.46□□□□□ -0.73
COL8A1-203ENST00000452013 LBX2Q6XYB7 198 aa10.46□□□□□ -0.73
COL8A1-203ENST00000452013 OTOP1Q7RTM1 612 aa10.46□□□□□ -0.73
COL8A1-203ENST00000452013 DGKHQ86XP1 1220 aa10.46□□□□□ -0.73
COL8A1-203ENST00000452013 MCOLN1Q9GZU1 580 aa10.46□□□□□ -0.73
COL8A1-203ENST00000452013 LSG1Q9H089 658 aaKnown RBP10.46□□□□□ -0.73
COL8A1-203ENST00000452013 NBPF3Q9H094 633 aa10.46□□□□□ -0.73
COL8A1-203ENST00000452013 RBPJLQ9UBG7 517 aa10.46□□□□□ -0.73
COL8A1-203ENST00000452013 RBM8AQ9Y5S9 174 aaKnown RBP10.46□□□□□ -0.73
COL8A1-203ENST00000452013 MYPNQ86TC9 1320 aa10.46□□□□□ -0.73
COL8A1-203ENST00000452013 PLIN4Q96Q06 1357 aa10.46□□□□□ -0.74
COL8A1-203ENST00000452013 AK9Q5TCS8 1911 aa10.45□□□□□ -0.74
COL8A1-203ENST00000452013 B4E1Z4 1266 aa10.45□□□□□ -0.74
COL8A1-203ENST00000452013 NMT2O60551 498 aa10.45□□□□□ -0.74
COL8A1-203ENST00000452013 EIF5BO60841 1220 aaKnown RBP10.45□□□□□ -0.74
COL8A1-203ENST00000452013 NDUFB10O96000 172 aa10.45□□□□□ -0.74
COL8A1-203ENST00000452013 CYP21A2P08686 494 aa10.45□□□□□ -0.74
COL8A1-203ENST00000452013 BMP3P12645 472 aa10.45□□□□□ -0.74
COL8A1-203ENST00000452013 FAM83BQ5T0W9 1011 aa10.45□□□□□ -0.74
COL8A1-203ENST00000452013 RALYLQ86SE5 291 aaKnown RBP10.45□□□□□ -0.74
COL8A1-203ENST00000452013 LRRC47Q8N1G4 583 aaKnown RBP10.45□□□□□ -0.74
COL8A1-203ENST00000452013 MB21D1Q8N884 522 aa10.45□□□□□ -0.74
COL8A1-203ENST00000452013 PRPF38AQ8NAV1 312 aaKnown RBP10.45□□□□□ -0.74
COL8A1-203ENST00000452013 NCOA7Q8NI08 942 aa10.45□□□□□ -0.74
COL8A1-203ENST00000452013 CHURC1Q8WUH1 139 aa10.45□□□□□ -0.74
COL8A1-203ENST00000452013 COA7Q96BR5 231 aa10.45□□□□□ -0.74
COL8A1-203ENST00000452013 UBAC1Q9BSL1 405 aa10.45□□□□□ -0.74
COL8A1-203ENST00000452013 PAGR1Q9BTK6 254 aa10.45□□□□□ -0.74
COL8A1-203ENST00000452013 CWC22Q9HCG8 908 aaKnown RBP10.45□□□□□ -0.74
COL8A1-203ENST00000452013 ZSWIM5Q9P217 1185 aa10.45□□□□□ -0.74
COL8A1-203ENST00000452013 FEM1BQ9UK73 627 aa10.45□□□□□ -0.74
COL8A1-203ENST00000452013 PTPN22Q9Y2R2 807 aa10.45□□□□□ -0.74
COL8A1-203ENST00000452013 CTDP1Q9Y5B0 961 aaPredicted RBP10.45□□□□□ -0.74
COL8A1-203ENST00000452013 NEDD4P46934 1319 aa10.44□□□□□ -0.74
COL8A1-203ENST00000452013 ERICH2A1L162 156 aa10.44□□□□□ -0.74
COL8A1-203ENST00000452013 SPDYE16A6NNV3 312 aaPredicted RBP10.44□□□□□ -0.74
COL8A1-203ENST00000452013 E7EWF7 191 aa10.44□□□□□ -0.74
COL8A1-203ENST00000452013 TNPO2O14787 897 aaKnown RBP10.44□□□□□ -0.74
COL8A1-203ENST00000452013 ZBED4O75132 1171 aa10.44□□□□□ -0.74
COL8A1-203ENST00000452013 REC8O95072 547 aa10.44□□□□□ -0.74
COL8A1-203ENST00000452013 FDX1P10109 184 aa10.44□□□□□ -0.74
COL8A1-203ENST00000452013 MAPK4P31152 587 aa10.44□□□□□ -0.74
COL8A1-203ENST00000452013 SLC1A4P43007 532 aa10.44□□□□□ -0.74
COL8A1-203ENST00000452013 ERVK-9P63128 1117 aa10.44□□□□□ -0.74
COL8A1-203ENST00000452013 ERVK-24P63145 666 aa10.44□□□□□ -0.74
COL8A1-203ENST00000452013 NECTIN1Q15223 517 aa10.44□□□□□ -0.74
COL8A1-203ENST00000452013 Q3C1V9 767 aa10.44□□□□□ -0.74
COL8A1-203ENST00000452013 RCSD1Q6JBY9 416 aa10.44□□□□□ -0.74
COL8A1-203ENST00000452013 SAMD1Q6SPF0 538 aaPredicted RBP10.44□□□□□ -0.74
COL8A1-203ENST00000452013 ANKS1AQ92625 1134 aa10.44□□□□□ -0.74
COL8A1-203ENST00000452013 GMCL1Q96IK5 515 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms