RNA–Protein interactions for RNA: ENST00000451343.4

TNXB-203, Transcript of tenascin XB, humanhuman

TSL 1 (best) BASIC

Gene TNXB, Length 3,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-203ENST00000451343 TRERF1Q96PN7 1200 aa13.08□□□□□ -0.32
TNXB-203ENST00000451343 PARD6BQ9BYG5 372 aa13.08□□□□□ -0.32
TNXB-203ENST00000451343 ENAHQ8N8S7 591 aaPredicted RBP13.07□□□□□ -0.32
TNXB-203ENST00000451343 NEK11Q8NG66 645 aa13.07□□□□□ -0.32
TNXB-203ENST00000451343 MYO1BO43795 1136 aa13.07□□□□□ -0.32
TNXB-203ENST00000451343 VEGFAP15692 232 aaPredicted RBP13.07□□□□□ -0.32
TNXB-203ENST00000451343 ATP6V1AP38606 617 aa13.07□□□□□ -0.32
TNXB-203ENST00000451343 ST5P78524 1137 aa13.07□□□□□ -0.32
TNXB-203ENST00000451343 SEC23AQ15436 765 aa13.07□□□□□ -0.32
TNXB-203ENST00000451343 MARCH10Q8NA82 808 aaPredicted RBP13.07□□□□□ -0.32
TNXB-203ENST00000451343 ACRBPQ8NEB7 543 aa13.07□□□□□ -0.32
TNXB-203ENST00000451343 CTNND2Q9UQB3 1225 aa13.07□□□□□ -0.32
TNXB-203ENST00000451343 CCDC196A0A1B0GTZ2 297 aa13.06□□□□□ -0.32
TNXB-203ENST00000451343 NMT2O60551 498 aa13.06□□□□□ -0.32
TNXB-203ENST00000451343 CASP14P31944 242 aa13.06□□□□□ -0.32
TNXB-203ENST00000451343 PPFIBP1Q86W92 1011 aa13.06□□□□□ -0.32
TNXB-203ENST00000451343 ZNF579Q8NAF0 562 aaKnown RBP13.06□□□□□ -0.32
TNXB-203ENST00000451343 MAPK8IP1Q9UQF2 711 aa13.06□□□□□ -0.32
TNXB-203ENST00000451343 AHDC1Q5TGY3 1603 aaPredicted RBP13.06□□□□□ -0.32
TNXB-203ENST00000451343 CCDC175P0C221 793 aa13.06□□□□□ -0.32
TNXB-203ENST00000451343 OAS2P29728 719 aaKnown RBP13.06□□□□□ -0.32
TNXB-203ENST00000451343 FXR1P51114 621 aaKnown RBP eCLIP13.06□□□□□ -0.32
TNXB-203ENST00000451343 CHRNDQ07001 517 aa13.06□□□□□ -0.32
TNXB-203ENST00000451343 CUL4BQ13620 913 aa13.06□□□□□ -0.32
TNXB-203ENST00000451343 RSRC2Q7L4I2 434 aaKnown RBP13.06□□□□□ -0.32
TNXB-203ENST00000451343 PTF1AQ7RTS3 328 aa13.06□□□□□ -0.32
TNXB-203ENST00000451343 SPATA20Q8TB22 786 aa13.06□□□□□ -0.32
TNXB-203ENST00000451343 ZBTB12Q9Y330 459 aaPredicted RBP13.06□□□□□ -0.32
TNXB-203ENST00000451343 ADGRG1Q9Y653 693 aa13.06□□□□□ -0.32
TNXB-203ENST00000451343 RNF225M0QZC1 329 aaPredicted RBP13.06□□□□□ -0.32
TNXB-203ENST00000451343 KRT2P35908 639 aa13.06□□□□□ -0.32
TNXB-203ENST00000451343 TRIML1Q8N9V2 468 aa13.06□□□□□ -0.32
TNXB-203ENST00000451343 RNF217Q8TC41 542 aa13.06□□□□□ -0.32
TNXB-203ENST00000451343 CEP131Q9UPN4 1083 aa13.06□□□□□ -0.32
TNXB-203ENST00000451343 NUP98P52948 1817 aa13.05□□□□□ -0.32
TNXB-203ENST00000451343 PNPLA7Q6ZV29 1317 aa13.05□□□□□ -0.32
TNXB-203ENST00000451343 NID2Q14112 1375 aa13.05□□□□□ -0.32
TNXB-203ENST00000451343 SPATA1Q5VX52 437 aa13.05□□□□□ -0.32
TNXB-203ENST00000451343 CDC5LQ99459 802 aaKnown RBP13.05□□□□□ -0.32
TNXB-203ENST00000451343 AATFQ9NY61 560 aaKnown RBP eCLIP13.05□□□□□ -0.32
TNXB-203ENST00000451343 ADD3Q9UEY8 706 aaKnown RBP13.05□□□□□ -0.32
TNXB-203ENST00000451343 SPATA31A1Q5TZJ5 1347 aa13.05□□□□□ -0.32
TNXB-203ENST00000451343 COL4A1P02462 1669 aa13.05□□□□□ -0.32
TNXB-203ENST00000451343 MAGEB6P1A0A0J9YX57 407 aa13.05□□□□□ -0.32
TNXB-203ENST00000451343 GOLGA6L9A6NEM1 432 aa13.05□□□□□ -0.32
TNXB-203ENST00000451343 PPP1R3GB7ZBB8 358 aa13.05□□□□□ -0.32
TNXB-203ENST00000451343 ERCC5P28715 1186 aaPredicted RBP13.05□□□□□ -0.32
TNXB-203ENST00000451343 FUT2Q10981 343 aa13.05□□□□□ -0.32
TNXB-203ENST00000451343 ZNF569Q5MCW4 686 aa13.05□□□□□ -0.32
TNXB-203ENST00000451343 ELOA2Q8IYF1 753 aaPredicted RBP13.05□□□□□ -0.32
TNXB-203ENST00000451343 CEP120Q8N960 986 aa13.05□□□□□ -0.32
TNXB-203ENST00000451343 ESR2Q92731 530 aa13.05□□□□□ -0.32
TNXB-203ENST00000451343 RNF26Q9BY78 433 aaPredicted RBP13.05□□□□□ -0.32
TNXB-203ENST00000451343 VPS16Q9H269 839 aa13.05□□□□□ -0.32
TNXB-203ENST00000451343 RNF41Q9H4P4 317 aaPredicted RBP13.05□□□□□ -0.32
TNXB-203ENST00000451343 BCL9O00512 1426 aa13.05□□□□□ -0.32
TNXB-203ENST00000451343 EP400Q96L91 3159 aa13.05□□□□□ -0.32
TNXB-203ENST00000451343 GYPCP04921 128 aa13.04□□□□□ -0.32
TNXB-203ENST00000451343 GNAT2P19087 354 aa13.04□□□□□ -0.32
TNXB-203ENST00000451343 CYP2C19P33261 490 aa13.04□□□□□ -0.32
TNXB-203ENST00000451343 IGHMBP2P38935 993 aaKnown RBP13.04□□□□□ -0.32
TNXB-203ENST00000451343 PTGDRQ13258 359 aa13.04□□□□□ -0.32
TNXB-203ENST00000451343 CT47A1Q5JQC4 288 aaPredicted RBP13.04□□□□□ -0.32
TNXB-203ENST00000451343 IFIT1BQ5T764 474 aaKnown RBP13.04□□□□□ -0.32
TNXB-203ENST00000451343 GPR161Q8N6U8 529 aaKnown RBP13.04□□□□□ -0.32
TNXB-203ENST00000451343 PHF20Q9BVI0 1012 aa13.04□□□□□ -0.32
TNXB-203ENST00000451343 XDHP47989 1333 aa13.04□□□□□ -0.32
TNXB-203ENST00000451343 IL6STP40189 918 aaPredicted RBP13.04□□□□□ -0.32
TNXB-203ENST00000451343 KANK3Q6NY19 840 aa13.04□□□□□ -0.32
TNXB-203ENST00000451343 TIAM2Q8IVF5 1701 aa13.04□□□□□ -0.32
TNXB-203ENST00000451343 ZSCAN10Q96SZ4 725 aaPredicted RBP13.04□□□□□ -0.32
TNXB-203ENST00000451343 TAB2Q9NYJ8 693 aa13.04□□□□□ -0.32
TNXB-203ENST00000451343 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.04□□□□□ -0.32
TNXB-203ENST00000451343 GOLGB1Q14789 3259 aaKnown RBP13.04□□□□□ -0.32
TNXB-203ENST00000451343 MFAP3LO75121 409 aa13.04□□□□□ -0.32
TNXB-203ENST00000451343 SMC1AQ14683 1233 aaKnown RBP13.04□□□□□ -0.32
TNXB-203ENST00000451343 NPY5RQ15761 445 aa13.04□□□□□ -0.32
TNXB-203ENST00000451343 FAM47AQ5JRC9 791 aa13.04□□□□□ -0.32
TNXB-203ENST00000451343 TTC38Q5R3I4 469 aa13.04□□□□□ -0.32
TNXB-203ENST00000451343 TMTC2Q8N394 836 aa13.04□□□□□ -0.32
TNXB-203ENST00000451343 GOLGA1Q92805 767 aa13.04□□□□□ -0.32
TNXB-203ENST00000451343 ITGB4P16144 1822 aa13.03□□□□□ -0.32
TNXB-203ENST00000451343 MYH2Q9UKX2 1941 aa13.03□□□□□ -0.32
TNXB-203ENST00000451343 ERVV-1B6SEH8 477 aa13.03□□□□□ -0.32
TNXB-203ENST00000451343 MCM7P33993 719 aa13.03□□□□□ -0.32
TNXB-203ENST00000451343 PBX1P40424 430 aa13.03□□□□□ -0.32
TNXB-203ENST00000451343 CDKAL1Q5VV42 579 aa13.03□□□□□ -0.32
TNXB-203ENST00000451343 RRAGBQ5VZM2 374 aa13.03□□□□□ -0.32
TNXB-203ENST00000451343 PIK3AP1Q6ZUJ8 805 aa13.03□□□□□ -0.32
TNXB-203ENST00000451343 C3orf67Q6ZVT6 689 aa13.03□□□□□ -0.32
TNXB-203ENST00000451343 SH3RF1Q7Z6J0 888 aa13.03□□□□□ -0.32
TNXB-203ENST00000451343 PANX2Q96RD6 677 aa13.03□□□□□ -0.32
TNXB-203ENST00000451343 SUGCTQ9HAC7 445 aa13.03□□□□□ -0.32
TNXB-203ENST00000451343 ARFGAP3Q9NP61 516 aa13.03□□□□□ -0.32
TNXB-203ENST00000451343 JAG2Q9Y219 1238 aa13.03□□□□□ -0.32
TNXB-203ENST00000451343 NIP7Q9Y221 180 aaKnown RBP eCLIP13.03□□□□□ -0.32
TNXB-203ENST00000451343 COL22A1Q8NFW1 1626 aaPredicted RBP13.03□□□□□ -0.32
TNXB-203ENST00000451343 CHMP4BP1P59074 171 aa13.03□□□□□ -0.32
TNXB-203ENST00000451343 BICDL1Q6ZP65 573 aa13.03□□□□□ -0.32
TNXB-203ENST00000451343 SLC35F6Q8N357 371 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms