RNA–Protein interactions for RNA: ENST00000449850.1

KDM1B-202, Transcript of lysine demethylase 1B, humanhuman

TSL 5

Gene KDM1B, Length 2,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-202ENST00000449850 GREB1LQ9C091 1923 aaPredicted RBP13.96□□□□□ -0.18
KDM1B-202ENST00000449850 CNTNAP5Q8WYK1 1306 aa13.95□□□□□ -0.18
KDM1B-202ENST00000449850 hCG_1642624A0A1W2PR95 340 aa13.95□□□□□ -0.18
KDM1B-202ENST00000449850 HIRAP54198 1017 aaPredicted RBP13.95□□□□□ -0.18
KDM1B-202ENST00000449850 MAP3K10Q02779 954 aa13.95□□□□□ -0.18
KDM1B-202ENST00000449850 DNM1Q05193 864 aaKnown RBP13.95□□□□□ -0.18
KDM1B-202ENST00000449850 MIGA2Q7L4E1 593 aa13.95□□□□□ -0.18
KDM1B-202ENST00000449850 SIAH1Q8IUQ4 282 aa13.95□□□□□ -0.18
KDM1B-202ENST00000449850 SHISA4Q96DD7 197 aa13.95□□□□□ -0.18
KDM1B-202ENST00000449850 RNF26Q9BY78 433 aaPredicted RBP13.95□□□□□ -0.18
KDM1B-202ENST00000449850 GDPD2Q9HCC8 539 aa13.95□□□□□ -0.18
KDM1B-202ENST00000449850 PALM3A6NDB9 673 aaPredicted RBP13.95□□□□□ -0.18
KDM1B-202ENST00000449850 TBC1D12O60347 775 aa13.95□□□□□ -0.18
KDM1B-202ENST00000449850 KIF5BP33176 963 aa13.95□□□□□ -0.18
KDM1B-202ENST00000449850 SEPT2Q15019 361 aa13.95□□□□□ -0.18
KDM1B-202ENST00000449850 TRIM22Q8IYM9 498 aa13.95□□□□□ -0.18
KDM1B-202ENST00000449850 LRRC47Q8N1G4 583 aaKnown RBP13.95□□□□□ -0.18
KDM1B-202ENST00000449850 LMBRD1Q9NUN5 540 aa13.95□□□□□ -0.18
KDM1B-202ENST00000449850 ATP6V1DQ9Y5K8 247 aa13.95□□□□□ -0.18
KDM1B-202ENST00000449850 V9GY48 417 aaPredicted RBP13.95□□□□□ -0.18
KDM1B-202ENST00000449850 PRPF3O43395 683 aaKnown RBP13.94□□□□□ -0.18
KDM1B-202ENST00000449850 DEXIO95424 95 aa13.94□□□□□ -0.18
KDM1B-202ENST00000449850 GH2P01242 217 aa13.94□□□□□ -0.18
KDM1B-202ENST00000449850 GOLGA8HP0CJ92 632 aa13.94□□□□□ -0.18
KDM1B-202ENST00000449850 PDHBP11177 359 aa13.94□□□□□ -0.18
KDM1B-202ENST00000449850 TNNI2P48788 182 aa13.94□□□□□ -0.18
KDM1B-202ENST00000449850 TNFAIP1Q13829 316 aa13.94□□□□□ -0.18
KDM1B-202ENST00000449850 GPR162Q16538 588 aa13.94□□□□□ -0.18
KDM1B-202ENST00000449850 ABCB5Q2M3G0 1257 aa13.94□□□□□ -0.18
KDM1B-202ENST00000449850 USP17L2Q6R6M4 530 aa13.94□□□□□ -0.18
KDM1B-202ENST00000449850 TMEM179Q6ZVK1 233 aa13.94□□□□□ -0.18
KDM1B-202ENST00000449850 DEFB129Q9H1M3 183 aa13.94□□□□□ -0.18
KDM1B-202ENST00000449850 CNPY2Q9Y2B0 182 aa13.94□□□□□ -0.18
KDM1B-202ENST00000449850 MYH8P13535 1937 aa13.94□□□□□ -0.18
KDM1B-202ENST00000449850 USP17L5A8MUK1 530 aa13.93□□□□□ -0.18
KDM1B-202ENST00000449850 CYTH3O43739 400 aa13.93□□□□□ -0.18
KDM1B-202ENST00000449850 SNHG28P0DPA3 235 aa13.93□□□□□ -0.18
KDM1B-202ENST00000449850 EEF2P13639 858 aaKnown RBP13.93□□□□□ -0.18
KDM1B-202ENST00000449850 VEGFAP15692 232 aaPredicted RBP13.93□□□□□ -0.18
KDM1B-202ENST00000449850 KRT40Q6A162 431 aa13.93□□□□□ -0.18
KDM1B-202ENST00000449850 RGS22Q8NE09 1264 aa13.93□□□□□ -0.18
KDM1B-202ENST00000449850 ZSCAN16Q9H4T2 348 aaPredicted RBP13.93□□□□□ -0.18
KDM1B-202ENST00000449850 KANSL2Q9H9L4 492 aa13.93□□□□□ -0.18
KDM1B-202ENST00000449850 DDX49Q9Y6V7 483 aaKnown RBP13.93□□□□□ -0.18
KDM1B-202ENST00000449850 KIF28PB7ZC32 967 aa13.93□□□□□ -0.18
KDM1B-202ENST00000449850 ANGEL2Q5VTE6 544 aaKnown RBP13.93□□□□□ -0.18
KDM1B-202ENST00000449850 MKL1Q969V6 931 aa13.93□□□□□ -0.18
KDM1B-202ENST00000449850 CPVLQ9H3G5 476 aa13.93□□□□□ -0.18
KDM1B-202ENST00000449850 NYAP2Q9P242 653 aa13.93□□□□□ -0.18
KDM1B-202ENST00000449850 MYH15Q9Y2K3 1946 aa13.92□□□□□ -0.18
KDM1B-202ENST00000449850 PRPF40AO75400 957 aaKnown RBP13.92□□□□□ -0.18
KDM1B-202ENST00000449850 ATP2B2Q01814 1243 aa13.92□□□□□ -0.18
KDM1B-202ENST00000449850 KIF23Q02241 960 aaPredicted RBP13.92□□□□□ -0.18
KDM1B-202ENST00000449850 ICA1Q05084 483 aa13.92□□□□□ -0.18
KDM1B-202ENST00000449850 WASF1Q92558 559 aa13.92□□□□□ -0.18
KDM1B-202ENST00000449850 GGA3Q9NZ52 723 aa13.92□□□□□ -0.18
KDM1B-202ENST00000449850 PHF20L1A8MW92 1017 aa13.91□□□□□ -0.18
KDM1B-202ENST00000449850 KLRF2D3W0D1 207 aa13.91□□□□□ -0.18
KDM1B-202ENST00000449850 PARP1P09874 1014 aaKnown RBP13.91□□□□□ -0.18
KDM1B-202ENST00000449850 GNAQP50148 359 aa13.91□□□□□ -0.18
KDM1B-202ENST00000449850 PIBF1Q8WXW3 757 aa13.91□□□□□ -0.18
KDM1B-202ENST00000449850 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.91□□□□□ -0.18
KDM1B-202ENST00000449850 A0A1W2PRG0 241 aa13.91□□□□□ -0.18
KDM1B-202ENST00000449850 KLHL40Q2TBA0 621 aa13.91□□□□□ -0.18
KDM1B-202ENST00000449850 NBPF12Q5TAG4 269 aaPredicted RBP13.91□□□□□ -0.18
KDM1B-202ENST00000449850 USP48Q86UV5 1035 aa13.91□□□□□ -0.18
KDM1B-202ENST00000449850 KCNJ14Q9UNX9 436 aa13.91□□□□□ -0.18
KDM1B-202ENST00000449850 FRMPD2Q68DX3 1309 aaPredicted RBP13.9□□□□□ -0.18
KDM1B-202ENST00000449850 BAZ2BQ9UIF8 2168 aaKnown RBP13.9□□□□□ -0.18
KDM1B-202ENST00000449850 MMP1P03956 469 aa13.9□□□□□ -0.18
KDM1B-202ENST00000449850 NCLP19338 710 aaKnown RBP13.9□□□□□ -0.18
KDM1B-202ENST00000449850 CAP2P40123 477 aa13.9□□□□□ -0.18
KDM1B-202ENST00000449850 AKAP17AQ02040 695 aaKnown RBP13.9□□□□□ -0.18
KDM1B-202ENST00000449850 PFKFB3Q16875 520 aaPredicted RBP13.9□□□□□ -0.18
KDM1B-202ENST00000449850 PPP4R3BQ5MIZ7 849 aa13.9□□□□□ -0.18
KDM1B-202ENST00000449850 PRAMEF18Q5VWM3 479 aa13.9□□□□□ -0.18
KDM1B-202ENST00000449850 SPZ1Q9BXG8 430 aa13.9□□□□□ -0.18
KDM1B-202ENST00000449850 CABP5Q9NP86 173 aa13.9□□□□□ -0.18
KDM1B-202ENST00000449850 ADARB2Q9NS39 739 aaKnown RBP13.9□□□□□ -0.18
KDM1B-202ENST00000449850 VPS54Q9P1Q0 977 aa13.9□□□□□ -0.18
KDM1B-202ENST00000449850 TFIP11Q9UBB9 837 aaKnown RBP13.9□□□□□ -0.18
KDM1B-202ENST00000449850 ZBTB21Q9ULJ3 1066 aa13.9□□□□□ -0.18
KDM1B-202ENST00000449850 FIBPO43427 364 aa13.9□□□□□ -0.18
KDM1B-202ENST00000449850 SCG2P13521 617 aa13.9□□□□□ -0.18
KDM1B-202ENST00000449850 U2AF2P26368 475 aaKnown RBP eCLIP13.9□□□□□ -0.18
KDM1B-202ENST00000449850 ZNF543Q08ER8 600 aa13.9□□□□□ -0.18
KDM1B-202ENST00000449850 TRIM29Q14134 588 aa13.9□□□□□ -0.18
KDM1B-202ENST00000449850 APOBEC3FQ8IUX4 373 aaKnown RBP13.9□□□□□ -0.18
KDM1B-202ENST00000449850 TMEM87AQ8NBN3 555 aa13.9□□□□□ -0.18
KDM1B-202ENST00000449850 FTOQ9C0B1 505 aaKnown RBP eCLIP13.9□□□□□ -0.18
KDM1B-202ENST00000449850 UBA5Q9GZZ9 404 aa13.9□□□□□ -0.18
KDM1B-202ENST00000449850 GRIN3BO60391 1043 aa13.89□□□□□ -0.19
KDM1B-202ENST00000449850 ECE1P42892 770 aa13.89□□□□□ -0.19
KDM1B-202ENST00000449850 KRT85P78386 507 aa13.89□□□□□ -0.19
KDM1B-202ENST00000449850 NPY5RQ15761 445 aa13.89□□□□□ -0.19
KDM1B-202ENST00000449850 ASPRV1Q53RT3 343 aa13.89□□□□□ -0.19
KDM1B-202ENST00000449850 L3MBTL3Q96JM7 780 aaPredicted RBP13.89□□□□□ -0.19
KDM1B-202ENST00000449850 PHF20Q9BVI0 1012 aa13.89□□□□□ -0.19
KDM1B-202ENST00000449850 BTBD18B2RXH4 712 aa13.88□□□□□ -0.19
KDM1B-202ENST00000449850 GADD45BO75293 160 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms