RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 ANO1Q5XXA6 986 aa12.2□□□□□ -0.46
VIPAS39-203ENST00000448935 RCSD1Q6JBY9 416 aa12.2□□□□□ -0.46
VIPAS39-203ENST00000448935 CCDC73Q6ZRK6 1079 aa12.2□□□□□ -0.46
VIPAS39-203ENST00000448935 LINC00301Q8NCQ3 95 aa12.2□□□□□ -0.46
VIPAS39-203ENST00000448935 PNMA1Q8ND90 353 aa12.2□□□□□ -0.46
VIPAS39-203ENST00000448935 NEDD1Q8NHV4 660 aa12.2□□□□□ -0.46
VIPAS39-203ENST00000448935 MS4A3Q96HJ5 214 aa12.2□□□□□ -0.46
VIPAS39-203ENST00000448935 PGBD1Q96JS3 809 aa12.2□□□□□ -0.46
VIPAS39-203ENST00000448935 ZDHHC15Q96MV8 337 aa12.2□□□□□ -0.46
VIPAS39-203ENST00000448935 AIFM3Q96NN9 605 aa12.2□□□□□ -0.46
VIPAS39-203ENST00000448935 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.2□□□□□ -0.46
VIPAS39-203ENST00000448935 BRMS1Q9HCU9 246 aa12.2□□□□□ -0.46
VIPAS39-203ENST00000448935 PSME4Q14997 1843 aa12.2□□□□□ -0.46
VIPAS39-203ENST00000448935 A0A1W2PQ27 194 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 A0A1W2PQ64 194 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 A0A1W2PQD8 194 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 SPTLC2O15270 562 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 CTAGE5O15320 804 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 CRKP46108 304 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 EVX2Q03828 476 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 MAP3K11Q16584 847 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 DACT2Q5SW24 774 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 ADALQ6DHV7 355 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 NOSTRINQ8IVI9 506 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 TMC2Q8TDI7 906 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 CCDC102AQ96A19 550 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 PSMD1Q99460 953 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 LZTS2Q9BRK4 669 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 TNMDQ9H2S6 317 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 DACT1Q9NYF0 836 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 SERPINA10Q9UK55 444 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 ZNF646O15015 1829 aaPredicted RBP12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 PLIN4Q96Q06 1357 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 KIF28PB7ZC32 967 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 PPIP5K2O43314 1243 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 NMT2O60551 498 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 LIG1P18858 919 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 SCNN1DP51172 638 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 FUT2Q10981 343 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 AOC3Q16853 763 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 SLC4A8Q2Y0W8 1093 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 RILPL1Q5EBL4 403 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 CDC42EP5Q6NZY7 148 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 CHRDL2Q6WN34 429 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 DIS3L2Q8IYB7 885 aaKnown RBP12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 FAM177A1Q8N128 213 aaPredicted RBP12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 CCDC82Q8N4S0 544 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 DHX36Q9H2U1 1008 aaKnown RBP12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 CLSTN2Q9H4D0 955 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 IL17RBQ9NRM6 502 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 GJB4Q9NTQ9 266 aa12.19□□□□□ -0.46
VIPAS39-203ENST00000448935 CNTNAP5Q8WYK1 1306 aa12.18□□□□□ -0.46
VIPAS39-203ENST00000448935 C21orf2O43822 256 aa12.18□□□□□ -0.46
VIPAS39-203ENST00000448935 PPP6R2O75170 966 aa12.18□□□□□ -0.46
VIPAS39-203ENST00000448935 WDHD1O75717 1129 aaPredicted RBP12.18□□□□□ -0.46
VIPAS39-203ENST00000448935 CCDC192P0DO97 292 aa12.18□□□□□ -0.46
VIPAS39-203ENST00000448935 POLD1P28340 1107 aa12.18□□□□□ -0.46
VIPAS39-203ENST00000448935 TGFB2P61812 414 aa12.18□□□□□ -0.46
VIPAS39-203ENST00000448935 CCDC173Q0VFZ6 552 aa12.18□□□□□ -0.46
VIPAS39-203ENST00000448935 PICALMQ13492 652 aa12.18□□□□□ -0.46
VIPAS39-203ENST00000448935 GRM4Q14833 912 aa12.18□□□□□ -0.46
VIPAS39-203ENST00000448935 SLC39A14Q15043 492 aa12.18□□□□□ -0.46
VIPAS39-203ENST00000448935 UVSSAQ2YD98 709 aa12.18□□□□□ -0.46
VIPAS39-203ENST00000448935 CCAR1Q8IX12 1150 aaKnown RBP12.18□□□□□ -0.46
VIPAS39-203ENST00000448935 MRPS27Q92552 414 aaKnown RBP12.18□□□□□ -0.46
VIPAS39-203ENST00000448935 OSBPL5Q9H0X9 879 aaPredicted RBP12.18□□□□□ -0.46
VIPAS39-203ENST00000448935 RBSNQ9H1K0 784 aa12.18□□□□□ -0.46
VIPAS39-203ENST00000448935 SERPINB13Q9UIV8 391 aa12.18□□□□□ -0.46
VIPAS39-203ENST00000448935 CEP131Q9UPN4 1083 aa12.18□□□□□ -0.46
VIPAS39-203ENST00000448935 CLIC4Q9Y696 253 aa12.18□□□□□ -0.46
VIPAS39-203ENST00000448935 V9GY48 417 aaPredicted RBP12.18□□□□□ -0.46
VIPAS39-203ENST00000448935 SCN9AQ15858 1988 aa12.17□□□□□ -0.46
VIPAS39-203ENST00000448935 PLEKHA8P1O95397 391 aa12.17□□□□□ -0.46
VIPAS39-203ENST00000448935 TOP1P11387 765 aaKnown RBP12.17□□□□□ -0.46
VIPAS39-203ENST00000448935 GUCY1A2P33402 732 aa12.17□□□□□ -0.46
VIPAS39-203ENST00000448935 TIE1P35590 1138 aa12.17□□□□□ -0.46
VIPAS39-203ENST00000448935 KRT2P35908 639 aa12.17□□□□□ -0.46
VIPAS39-203ENST00000448935 FAM160A1Q05DH4 1040 aa12.17□□□□□ -0.46
VIPAS39-203ENST00000448935 GABPAQ06546 454 aa12.17□□□□□ -0.46
VIPAS39-203ENST00000448935 AMHR2Q16671 573 aa12.17□□□□□ -0.46
VIPAS39-203ENST00000448935 APOBEC3HQ6NTF7 200 aaKnown RBP12.17□□□□□ -0.46
VIPAS39-203ENST00000448935 CMTR1Q8N1G2 835 aaKnown RBP12.17□□□□□ -0.46
VIPAS39-203ENST00000448935 PHF20Q9BVI0 1012 aa12.17□□□□□ -0.46
VIPAS39-203ENST00000448935 FTOQ9C0B1 505 aaKnown RBP eCLIP12.17□□□□□ -0.46
VIPAS39-203ENST00000448935 EHD4Q9H223 541 aa12.17□□□□□ -0.46
VIPAS39-203ENST00000448935 PCDHA7Q9UN72 937 aa12.17□□□□□ -0.46
VIPAS39-203ENST00000448935 STX8Q9UNK0 236 aa12.17□□□□□ -0.46
VIPAS39-203ENST00000448935 KINO60870 393 aaKnown RBP12.16□□□□□ -0.46
VIPAS39-203ENST00000448935 SCG2P13521 617 aa12.16□□□□□ -0.46
VIPAS39-203ENST00000448935 CALML3P27482 149 aa12.16□□□□□ -0.46
VIPAS39-203ENST00000448935 NOVP48745 357 aa12.16□□□□□ -0.46
VIPAS39-203ENST00000448935 RBM5P52756 815 aaKnown RBP eCLIP12.16□□□□□ -0.46
VIPAS39-203ENST00000448935 PKN1Q16512 942 aa12.16□□□□□ -0.46
VIPAS39-203ENST00000448935 PFKFB3Q16875 520 aaPredicted RBP12.16□□□□□ -0.46
VIPAS39-203ENST00000448935 RBM43Q6ZSC3 357 aaKnown RBP12.16□□□□□ -0.46
VIPAS39-203ENST00000448935 KIAA0825Q8IV33 1275 aa12.16□□□□□ -0.46
VIPAS39-203ENST00000448935 SRBD1Q8N5C6 995 aaKnown RBP12.16□□□□□ -0.46
VIPAS39-203ENST00000448935 FSIP1Q8NA03 581 aa12.16□□□□□ -0.46
VIPAS39-203ENST00000448935 SLC44A5Q8NCS7 719 aa12.16□□□□□ -0.46
VIPAS39-203ENST00000448935 TMEM47Q9BQJ4 181 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms