RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 MIER1Q8N108 512 aa16.04■□□□□ 0.16
HMGB3-204ENST00000448905 DEFB123Q8N688 67 aa16.04■□□□□ 0.16
HMGB3-204ENST00000448905 SHCBP1Q8NEM2 672 aa16.04■□□□□ 0.16
HMGB3-204ENST00000448905 MROH8Q9H579 483 aa16.04■□□□□ 0.16
HMGB3-204ENST00000448905 DCP1AQ9NPI6 582 aaPredicted RBP16.04■□□□□ 0.16
HMGB3-204ENST00000448905 CYP2C19P33261 490 aa16.03■□□□□ 0.16
HMGB3-204ENST00000448905 PLS1Q14651 629 aa16.03■□□□□ 0.16
HMGB3-204ENST00000448905 LRRC26Q2I0M4 334 aa16.03■□□□□ 0.16
HMGB3-204ENST00000448905 OLFML2BQ68BL8 750 aa16.03■□□□□ 0.16
HMGB3-204ENST00000448905 ZSCAN25Q6NSZ9 544 aa16.03■□□□□ 0.16
HMGB3-204ENST00000448905 SDR42E1Q8WUS8 393 aa16.03■□□□□ 0.16
HMGB3-204ENST00000448905 MOV10L1Q9BXT6 1211 aaKnown RBP16.03■□□□□ 0.16
HMGB3-204ENST00000448905 SPATC1LQ9H0A9 340 aa16.03■□□□□ 0.16
HMGB3-204ENST00000448905 PAG1Q9NWQ8 432 aa16.03■□□□□ 0.16
HMGB3-204ENST00000448905 FLRT1Q9NZU1 646 aa16.03■□□□□ 0.16
HMGB3-204ENST00000448905 A0A1W2PRG0 241 aa16.02■□□□□ 0.16
HMGB3-204ENST00000448905 DNM1LO00429 736 aa16.02■□□□□ 0.16
HMGB3-204ENST00000448905 ADORA2AP29274 412 aa16.02■□□□□ 0.16
HMGB3-204ENST00000448905 ABRAQ8N0Z2 381 aa16.02■□□□□ 0.16
HMGB3-204ENST00000448905 NPLOC4Q8TAT6 608 aa16.02■□□□□ 0.16
HMGB3-204ENST00000448905 BOLA2Q9H3K6 86 aa16.02■□□□□ 0.16
HMGB3-204ENST00000448905 ARMT1Q9H993 441 aa16.02■□□□□ 0.16
HMGB3-204ENST00000448905 PLXNB2O15031 1838 aa16.02■□□□□ 0.16
HMGB3-204ENST00000448905 LOC285556D6RIA3 1793 aa16.01■□□□□ 0.15
HMGB3-204ENST00000448905 TCRBV5S4A2TA0A5A2 114 aa16.01■□□□□ 0.15
HMGB3-204ENST00000448905 DLL1O00548 723 aa16.01■□□□□ 0.15
HMGB3-204ENST00000448905 FLOT1O75955 427 aa16.01■□□□□ 0.15
HMGB3-204ENST00000448905 FCER1AP12319 257 aa16.01■□□□□ 0.15
HMGB3-204ENST00000448905 ATP5JP18859 108 aa16.01■□□□□ 0.15
HMGB3-204ENST00000448905 ERCC3P19447 782 aa16.01■□□□□ 0.15
HMGB3-204ENST00000448905 DSG3P32926 999 aa16.01■□□□□ 0.15
HMGB3-204ENST00000448905 NCAPG2Q86XI2 1143 aa16.01■□□□□ 0.15
HMGB3-204ENST00000448905 LCORLQ8N3X6 602 aa16.01■□□□□ 0.15
HMGB3-204ENST00000448905 ZBTB40Q9NUA8 1239 aa16.01■□□□□ 0.15
HMGB3-204ENST00000448905 TMX2Q9Y320 296 aa16.01■□□□□ 0.15
HMGB3-204ENST00000448905 ZBED9Q6R2W3 1325 aa16■□□□□ 0.15
HMGB3-204ENST00000448905 KBTBD13C9JR72 458 aa16■□□□□ 0.15
HMGB3-204ENST00000448905 SLC25A27O95847 323 aa16■□□□□ 0.15
HMGB3-204ENST00000448905 ADD2P35612 726 aa16■□□□□ 0.15
HMGB3-204ENST00000448905 MDM2Q00987 491 aaPredicted RBP16■□□□□ 0.15
HMGB3-204ENST00000448905 ICA1Q05084 483 aa16■□□□□ 0.15
HMGB3-204ENST00000448905 DIEXFQ68CQ4 756 aaKnown RBP16■□□□□ 0.15
HMGB3-204ENST00000448905 KANSL2Q9H9L4 492 aa16■□□□□ 0.15
HMGB3-204ENST00000448905 SIPA1L1O43166 1804 aa15.99■□□□□ 0.15
HMGB3-204ENST00000448905 USP17L12C9JPN9 530 aa15.99■□□□□ 0.15
HMGB3-204ENST00000448905 USP17L21D6R901 530 aa15.99■□□□□ 0.15
HMGB3-204ENST00000448905 SEPT4O43236 478 aa15.99■□□□□ 0.15
HMGB3-204ENST00000448905 MBD4O95243 580 aa15.99■□□□□ 0.15
HMGB3-204ENST00000448905 MYCNP04198 464 aaPredicted RBP15.99■□□□□ 0.15
HMGB3-204ENST00000448905 CYP2D6P10635 497 aa15.99■□□□□ 0.15
HMGB3-204ENST00000448905 ATN1P54259 1190 aaPredicted RBP15.99■□□□□ 0.15
HMGB3-204ENST00000448905 UBE3CQ15386 1083 aa15.99■□□□□ 0.15
HMGB3-204ENST00000448905 C12orf60Q5U649 245 aa15.99■□□□□ 0.15
HMGB3-204ENST00000448905 SAMD1Q6SPF0 538 aaPredicted RBP15.99■□□□□ 0.15
HMGB3-204ENST00000448905 SPICE1Q8N0Z3 855 aa15.99■□□□□ 0.15
HMGB3-204ENST00000448905 DYNLL2Q96FJ2 89 aa15.99■□□□□ 0.15
HMGB3-204ENST00000448905 HAUS7Q99871 368 aa15.99■□□□□ 0.15
HMGB3-204ENST00000448905 VCPKMTQ9H867 229 aa15.99■□□□□ 0.15
HMGB3-204ENST00000448905 COG6Q9Y2V7 657 aa15.99■□□□□ 0.15
HMGB3-204ENST00000448905 MYO5AQ9Y4I1 1855 aaKnown RBP15.99■□□□□ 0.15
HMGB3-204ENST00000448905 WDR46O15213 610 aaKnown RBP15.98■□□□□ 0.15
HMGB3-204ENST00000448905 PRKAB2O43741 272 aa15.98■□□□□ 0.15
HMGB3-204ENST00000448905 CYBAP13498 195 aa15.98■□□□□ 0.15
HMGB3-204ENST00000448905 CDK8P49336 464 aa15.98■□□□□ 0.15
HMGB3-204ENST00000448905 DDX60LQ5H9U9 1706 aaKnown RBP15.98■□□□□ 0.15
HMGB3-204ENST00000448905 GJC2Q5T442 439 aaPredicted RBP15.98■□□□□ 0.15
HMGB3-204ENST00000448905 Q7L0L9 218 aa15.98■□□□□ 0.15
HMGB3-204ENST00000448905 GOPCQ9HD26 462 aa15.98■□□□□ 0.15
HMGB3-204ENST00000448905 STXBP5LQ9Y2K9 1186 aa15.98■□□□□ 0.15
HMGB3-204ENST00000448905 SLC4A4Q9Y6R1 1079 aa15.98■□□□□ 0.15
HMGB3-204ENST00000448905 COL6A3P12111 3177 aa15.97■□□□□ 0.15
HMGB3-204ENST00000448905 RAD21O60216 631 aa15.97■□□□□ 0.15
HMGB3-204ENST00000448905 COBLO75128 1261 aa15.97■□□□□ 0.15
HMGB3-204ENST00000448905 AKR1B1P15121 316 aa15.97■□□□□ 0.15
HMGB3-204ENST00000448905 COPB2P35606 906 aa15.97■□□□□ 0.15
HMGB3-204ENST00000448905 KCTD2Q14681 263 aa15.97■□□□□ 0.15
HMGB3-204ENST00000448905 SLC39A5Q6ZMH5 540 aa15.97■□□□□ 0.15
HMGB3-204ENST00000448905 SIAH1Q8IUQ4 282 aa15.97■□□□□ 0.15
HMGB3-204ENST00000448905 SIRT2Q8IXJ6 389 aa15.97■□□□□ 0.15
HMGB3-204ENST00000448905 SLC44A5Q8NCS7 719 aa15.97■□□□□ 0.15
HMGB3-204ENST00000448905 TRPV1Q8NER1 839 aa15.97■□□□□ 0.15
HMGB3-204ENST00000448905 LRRCC1Q9C099 1032 aa15.97■□□□□ 0.15
HMGB3-204ENST00000448905 NRBP1Q9UHY1 535 aa15.97■□□□□ 0.15
HMGB3-204ENST00000448905 ATP11BQ9Y2G3 1177 aa15.97■□□□□ 0.15
HMGB3-204ENST00000448905 IGHA2P01877 340 aa15.96■□□□□ 0.15
HMGB3-204ENST00000448905 EEF2P13639 858 aaKnown RBP15.96■□□□□ 0.15
HMGB3-204ENST00000448905 RTP1P59025 263 aa15.96■□□□□ 0.15
HMGB3-204ENST00000448905 C16orf86Q6ZW13 317 aa15.96■□□□□ 0.15
HMGB3-204ENST00000448905 ATG4CQ96DT6 458 aa15.96■□□□□ 0.15
HMGB3-204ENST00000448905 MMP19Q99542 508 aa15.96■□□□□ 0.15
HMGB3-204ENST00000448905 MKNK2Q9HBH9 465 aa15.96■□□□□ 0.15
HMGB3-204ENST00000448905 MTMR10Q9NXD2 777 aa15.96■□□□□ 0.15
HMGB3-204ENST00000448905 CDK5RAP2Q96SN8 1893 aa15.96■□□□□ 0.15
HMGB3-204ENST00000448905 STAT3P40763 770 aa15.95■□□□□ 0.14
HMGB3-204ENST00000448905 EVX2Q03828 476 aa15.95■□□□□ 0.14
HMGB3-204ENST00000448905 KIAA1755Q5JYT7 1200 aa15.95■□□□□ 0.14
HMGB3-204ENST00000448905 FAM109BQ6ICB4 259 aaPredicted RBP15.95■□□□□ 0.14
HMGB3-204ENST00000448905 MAML3Q96JK9 1138 aa15.95■□□□□ 0.14
HMGB3-204ENST00000448905 ZNF287Q9HBT7 754 aa15.95■□□□□ 0.14
HMGB3-204ENST00000448905 DIS3Q9Y2L1 958 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms