RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 GUCY1A2P33402 732 aa16.52■□□□□ 0.24
PDLIM2-213ENST00000448520 COG2Q14746 738 aa16.52■□□□□ 0.24
PDLIM2-213ENST00000448520 SEPT2Q15019 361 aa16.52■□□□□ 0.24
PDLIM2-213ENST00000448520 CCL14Q16627 93 aa16.52■□□□□ 0.24
PDLIM2-213ENST00000448520 LHX8Q68G74 356 aa16.52■□□□□ 0.24
PDLIM2-213ENST00000448520 RPAP3Q9H6T3 665 aaPredicted RBP16.52■□□□□ 0.24
PDLIM2-213ENST00000448520 SWAP70Q9UH65 585 aa16.52■□□□□ 0.24
PDLIM2-213ENST00000448520 TCRBV5S4A2TA0A5A2 114 aa16.51■□□□□ 0.23
PDLIM2-213ENST00000448520 MPHOSPH10O00566 681 aaKnown RBP16.51■□□□□ 0.23
PDLIM2-213ENST00000448520 STRNO43815 780 aa16.51■□□□□ 0.23
PDLIM2-213ENST00000448520 MSCO60682 206 aa16.51■□□□□ 0.23
PDLIM2-213ENST00000448520 HOXC6P09630 235 aa16.51■□□□□ 0.23
PDLIM2-213ENST00000448520 CCND3P30281 292 aaPredicted RBP16.51■□□□□ 0.23
PDLIM2-213ENST00000448520 ATP2B2Q01814 1243 aa16.51■□□□□ 0.23
PDLIM2-213ENST00000448520 WDR78Q5VTH9 848 aa16.51■□□□□ 0.23
PDLIM2-213ENST00000448520 PLEKHM2Q8IWE5 1019 aa16.51■□□□□ 0.23
PDLIM2-213ENST00000448520 DNAJC2Q99543 621 aaKnown RBP16.51■□□□□ 0.23
PDLIM2-213ENST00000448520 DCP1AQ9NPI6 582 aaPredicted RBP16.51■□□□□ 0.23
PDLIM2-213ENST00000448520 ATP8A2Q9NTI2 1148 aa16.51■□□□□ 0.23
PDLIM2-213ENST00000448520 SPDYE16A6NNV3 312 aaPredicted RBP16.5■□□□□ 0.23
PDLIM2-213ENST00000448520 COL6A1P12109 1028 aa16.5■□□□□ 0.23
PDLIM2-213ENST00000448520 MX1P20591 662 aa16.5■□□□□ 0.23
PDLIM2-213ENST00000448520 GRB14Q14449 540 aa16.5■□□□□ 0.23
PDLIM2-213ENST00000448520 TMEM179Q6ZVK1 233 aa16.5■□□□□ 0.23
PDLIM2-213ENST00000448520 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.5■□□□□ 0.23
PDLIM2-213ENST00000448520 BTBD7Q9P203 1132 aa16.5■□□□□ 0.23
PDLIM2-213ENST00000448520 ZMYND8Q9ULU4 1186 aaPredicted RBP16.5■□□□□ 0.23
PDLIM2-213ENST00000448520 ATP5JP18859 108 aa16.49■□□□□ 0.23
PDLIM2-213ENST00000448520 PDE1AP54750 535 aa16.49■□□□□ 0.23
PDLIM2-213ENST00000448520 GPR153Q6NV75 609 aa16.49■□□□□ 0.23
PDLIM2-213ENST00000448520 MB21D1Q8N884 522 aa16.49■□□□□ 0.23
PDLIM2-213ENST00000448520 SDR42E1Q8WUS8 393 aa16.49■□□□□ 0.23
PDLIM2-213ENST00000448520 LPAR1Q92633 364 aa16.49■□□□□ 0.23
PDLIM2-213ENST00000448520 CCDC17Q96LX7 622 aa16.49■□□□□ 0.23
PDLIM2-213ENST00000448520 BOLA2Q9H3K6 86 aa16.49■□□□□ 0.23
PDLIM2-213ENST00000448520 PAG1Q9NWQ8 432 aa16.49■□□□□ 0.23
PDLIM2-213ENST00000448520 PFASO15067 1338 aa16.48■□□□□ 0.23
PDLIM2-213ENST00000448520 DDX60LQ5H9U9 1706 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-213ENST00000448520 A0A1W2PRG0 241 aa16.48■□□□□ 0.23
PDLIM2-213ENST00000448520 ADD2P35612 726 aa16.48■□□□□ 0.23
PDLIM2-213ENST00000448520 DPP9Q86TI2 863 aa16.48■□□□□ 0.23
PDLIM2-213ENST00000448520 AMOTL1Q8IY63 956 aa16.48■□□□□ 0.23
PDLIM2-213ENST00000448520 LCORLQ8N3X6 602 aa16.48■□□□□ 0.23
PDLIM2-213ENST00000448520 SHCBP1Q8NEM2 672 aa16.48■□□□□ 0.23
PDLIM2-213ENST00000448520 DDRGK1Q96HY6 314 aa16.48■□□□□ 0.23
PDLIM2-213ENST00000448520 SH2D4AQ9H788 454 aa16.48■□□□□ 0.23
PDLIM2-213ENST00000448520 ARHGEF10LQ9HCE6 1279 aa16.48■□□□□ 0.23
PDLIM2-213ENST00000448520 ECHDC1Q9NTX5 307 aa16.48■□□□□ 0.23
PDLIM2-213ENST00000448520 PI4K2BQ8TCG2 481 aa16.47■□□□□ 0.23
PDLIM2-213ENST00000448520 HAUS7Q99871 368 aa16.47■□□□□ 0.23
PDLIM2-213ENST00000448520 TANGO6Q9C0B7 1094 aa16.47■□□□□ 0.23
PDLIM2-213ENST00000448520 ARMT1Q9H993 441 aa16.47■□□□□ 0.23
PDLIM2-213ENST00000448520 SLC5A4Q9NY91 659 aa16.47■□□□□ 0.23
PDLIM2-213ENST00000448520 FLRT1Q9NZU1 646 aa16.47■□□□□ 0.23
PDLIM2-213ENST00000448520 DDX20Q9UHI6 824 aaKnown RBP16.47■□□□□ 0.23
PDLIM2-213ENST00000448520 TMX2Q9Y320 296 aa16.47■□□□□ 0.23
PDLIM2-213ENST00000448520 SYN1P17600 705 aa16.46■□□□□ 0.23
PDLIM2-213ENST00000448520 CNGA1P29973 690 aa16.46■□□□□ 0.23
PDLIM2-213ENST00000448520 DSG3P32926 999 aa16.46■□□□□ 0.23
PDLIM2-213ENST00000448520 MAGEA10P43363 369 aaPredicted RBP16.46■□□□□ 0.23
PDLIM2-213ENST00000448520 UBE3CQ15386 1083 aa16.46■□□□□ 0.23
PDLIM2-213ENST00000448520 LRIT3Q3SXY7 679 aa16.46■□□□□ 0.23
PDLIM2-213ENST00000448520 OLFML2BQ68BL8 750 aa16.46■□□□□ 0.23
PDLIM2-213ENST00000448520 ZSCAN25Q6NSZ9 544 aa16.46■□□□□ 0.23
PDLIM2-213ENST00000448520 NPLOC4Q8TAT6 608 aa16.46■□□□□ 0.23
PDLIM2-213ENST00000448520 MOV10L1Q9BXT6 1211 aaKnown RBP16.46■□□□□ 0.23
PDLIM2-213ENST00000448520 SPATC1LQ9H0A9 340 aa16.46■□□□□ 0.23
PDLIM2-213ENST00000448520 NAV1Q8NEY1 1877 aa16.46■□□□□ 0.22
PDLIM2-213ENST00000448520 SOX1O00570 391 aaPredicted RBP16.45■□□□□ 0.22
PDLIM2-213ENST00000448520 IGHA2P01877 340 aa16.45■□□□□ 0.22
PDLIM2-213ENST00000448520 CYP2D6P10635 497 aa16.45■□□□□ 0.22
PDLIM2-213ENST00000448520 C12orf60Q5U649 245 aa16.45■□□□□ 0.22
PDLIM2-213ENST00000448520 TDHQ8IZJ6 230 aa16.45■□□□□ 0.22
PDLIM2-213ENST00000448520 ABRAQ8N0Z2 381 aa16.45■□□□□ 0.22
PDLIM2-213ENST00000448520 SLC44A5Q8NCS7 719 aa16.45■□□□□ 0.22
PDLIM2-213ENST00000448520 LRCH3Q96II8 777 aa16.45■□□□□ 0.22
PDLIM2-213ENST00000448520 UBE2OQ9C0C9 1292 aaKnown RBP16.45■□□□□ 0.22
PDLIM2-213ENST00000448520 MROH8Q9H579 483 aa16.45■□□□□ 0.22
PDLIM2-213ENST00000448520 TTC41PQ6P2S7 1318 aa16.45■□□□□ 0.22
PDLIM2-213ENST00000448520 USP17L12C9JPN9 530 aa16.44■□□□□ 0.22
PDLIM2-213ENST00000448520 USP17L21D6R901 530 aa16.44■□□□□ 0.22
PDLIM2-213ENST00000448520 PRKAB2O43741 272 aa16.44■□□□□ 0.22
PDLIM2-213ENST00000448520 FLOT1O75955 427 aa16.44■□□□□ 0.22
PDLIM2-213ENST00000448520 MBD4O95243 580 aa16.44■□□□□ 0.22
PDLIM2-213ENST00000448520 ERCC3P19447 782 aa16.44■□□□□ 0.22
PDLIM2-213ENST00000448520 ADORA2AP29274 412 aa16.44■□□□□ 0.22
PDLIM2-213ENST00000448520 CYP2C19P33261 490 aa16.44■□□□□ 0.22
PDLIM2-213ENST00000448520 CDK8P49336 464 aa16.44■□□□□ 0.22
PDLIM2-213ENST00000448520 EVX2Q03828 476 aa16.44■□□□□ 0.22
PDLIM2-213ENST00000448520 ICA1Q05084 483 aa16.44■□□□□ 0.22
PDLIM2-213ENST00000448520 LRRC26Q2I0M4 334 aa16.44■□□□□ 0.22
PDLIM2-213ENST00000448520 SIAH1Q8IUQ4 282 aa16.44■□□□□ 0.22
PDLIM2-213ENST00000448520 ARRDC4Q8NCT1 418 aa16.44■□□□□ 0.22
PDLIM2-213ENST00000448520 DYNLL2Q96FJ2 89 aa16.44■□□□□ 0.22
PDLIM2-213ENST00000448520 GPATCH3Q96I76 525 aa16.44■□□□□ 0.22
PDLIM2-213ENST00000448520 SENP6Q9GZR1 1112 aaPredicted RBP16.44■□□□□ 0.22
PDLIM2-213ENST00000448520 VCPKMTQ9H867 229 aa16.44■□□□□ 0.22
PDLIM2-213ENST00000448520 KANSL2Q9H9L4 492 aa16.44■□□□□ 0.22
PDLIM2-213ENST00000448520 LAMA3Q16787 3333 aa16.44■□□□□ 0.22
PDLIM2-213ENST00000448520 MYH8P13535 1937 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms