RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 TMEM179Q6ZVK1 233 aa34.11■■■■□ 3.05
CBX4-202ENST00000448310 C7orf61Q8IZ16 206 aa34.11■■■■□ 3.05
CBX4-202ENST00000448310 C11orf49Q9H6J7 331 aa34.11■■■■□ 3.05
CBX4-202ENST00000448310 ATP8A2Q9NTI2 1148 aa34.11■■■■□ 3.05
CBX4-202ENST00000448310 GLRX3O76003 335 aaKnown RBP34.1■■■■□ 3.05
CBX4-202ENST00000448310 PTPREP23469 700 aa34.1■■■■□ 3.05
CBX4-202ENST00000448310 TANGO6Q9C0B7 1094 aa34.1■■■■□ 3.05
CBX4-202ENST00000448310 FLRT1Q9NZU1 646 aa34.1■■■■□ 3.05
CBX4-202ENST00000448310 A0A0G2JMZ2 1700 aa34.09■■■■□ 3.05
CBX4-202ENST00000448310 SLC15A5A6NIM6 579 aa34.08■■■■□ 3.05
CBX4-202ENST00000448310 UBE3CQ15386 1083 aa34.08■■■■□ 3.05
CBX4-202ENST00000448310 STAP2Q9UGK3 403 aa34.08■■■■□ 3.05
CBX4-202ENST00000448310 USP17L12C9JPN9 530 aa34.07■■■■□ 3.04
CBX4-202ENST00000448310 USP17L21D6R901 530 aa34.07■■■■□ 3.04
CBX4-202ENST00000448310 COG2Q14746 738 aa34.07■■■■□ 3.04
CBX4-202ENST00000448310 C12orf60Q5U649 245 aa34.07■■■■□ 3.04
CBX4-202ENST00000448310 SIAH1Q8IUQ4 282 aa34.07■■■■□ 3.04
CBX4-202ENST00000448310 ZMYND8Q9ULU4 1186 aaPredicted RBP34.07■■■■□ 3.04
CBX4-202ENST00000448310 SLC4A4Q9Y6R1 1079 aa34.07■■■■□ 3.04
CBX4-202ENST00000448310 IVNS1ABPQ9Y6Y0 642 aa34.07■■■■□ 3.04
CBX4-202ENST00000448310 CDK8P49336 464 aa34.06■■■■□ 3.04
CBX4-202ENST00000448310 GRB14Q14449 540 aa34.06■■■■□ 3.04
CBX4-202ENST00000448310 LHX8Q68G74 356 aa34.06■■■■□ 3.04
CBX4-202ENST00000448310 PUS7LQ9H0K6 701 aaKnown RBP34.06■■■■□ 3.04
CBX4-202ENST00000448310 PARP14Q460N5 1801 aa34.06■■■■□ 3.04
CBX4-202ENST00000448310 PFASO15067 1338 aa34.05■■■■□ 3.04
CBX4-202ENST00000448310 ICA1Q05084 483 aa34.05■■■■□ 3.04
CBX4-202ENST00000448310 SPICE1Q8N0Z3 855 aa34.05■■■■□ 3.04
CBX4-202ENST00000448310 NPLOC4Q8TAT6 608 aa34.05■■■■□ 3.04
CBX4-202ENST00000448310 ARHGEF10LQ9HCE6 1279 aa34.05■■■■□ 3.04
CBX4-202ENST00000448310 MFSD14CQ5VZR4 134 aa34.04■■■■□ 3.04
CBX4-202ENST00000448310 AMOTL1Q8IY63 956 aa34.04■■■■□ 3.04
CBX4-202ENST00000448310 MOV10L1Q9BXT6 1211 aaKnown RBP34.04■■■■□ 3.04
CBX4-202ENST00000448310 HOXC10Q9NYD6 342 aa34.04■■■■□ 3.04
CBX4-202ENST00000448310 ZSCAN25Q6NSZ9 544 aa34.03■■■■□ 3.04
CBX4-202ENST00000448310 DDRGK1Q96HY6 314 aa34.03■■■■□ 3.04
CBX4-202ENST00000448310 ECHDC1Q9NTX5 307 aa34.03■■■■□ 3.04
CBX4-202ENST00000448310 TMX2Q9Y320 296 aa34.03■■■■□ 3.04
CBX4-202ENST00000448310 HOXC6P09630 235 aa34.02■■■■□ 3.04
CBX4-202ENST00000448310 SYN1P17600 705 aa34.02■■■■□ 3.04
CBX4-202ENST00000448310 ATP2B2Q01814 1243 aa34.02■■■■□ 3.04
CBX4-202ENST00000448310 C16orf86Q6ZW13 317 aa34.02■■■■□ 3.04
CBX4-202ENST00000448310 TSHZ3Q63HK5 1081 aa34.01■■■■□ 3.03
CBX4-202ENST00000448310 CTR9Q6PD62 1173 aa34.01■■■■□ 3.03
CBX4-202ENST00000448310 SAMD1Q6SPF0 538 aaPredicted RBP34.01■■■■□ 3.03
CBX4-202ENST00000448310 LPAR1Q92633 364 aa34.01■■■■□ 3.03
CBX4-202ENST00000448310 CCDC17Q96LX7 622 aa34.01■■■■□ 3.03
CBX4-202ENST00000448310 SPATC1LQ9H0A9 340 aa34.01■■■■□ 3.03
CBX4-202ENST00000448310 VCPKMTQ9H867 229 aa34.01■■■■□ 3.03
CBX4-202ENST00000448310 COL11A1P12107 1806 aaPredicted RBP34.01■■■■□ 3.03
CBX4-202ENST00000448310 ZNF236Q9UL36 1845 aa34.01■■■■□ 3.03
CBX4-202ENST00000448310 FLOT1O75955 427 aa34■■■■□ 3.03
CBX4-202ENST00000448310 DSG3P32926 999 aa34■■■■□ 3.03
CBX4-202ENST00000448310 CYP2C19P33261 490 aa34■■■■□ 3.03
CBX4-202ENST00000448310 ATG4CQ96DT6 458 aa34■■■■□ 3.03
CBX4-202ENST00000448310 COL6A1P12109 1028 aa33.99■■■■□ 3.03
CBX4-202ENST00000448310 ERCC3P19447 782 aa33.99■■■■□ 3.03
CBX4-202ENST00000448310 PLS1Q14651 629 aa33.99■■■■□ 3.03
CBX4-202ENST00000448310 SH2D4AQ9H788 454 aa33.99■■■■□ 3.03
CBX4-202ENST00000448310 ADORA2AP29274 412 aa33.98■■■■□ 3.03
CBX4-202ENST00000448310 CNGA1P29973 690 aa33.98■■■■□ 3.03
CBX4-202ENST00000448310 DPP9Q86TI2 863 aa33.98■■■■□ 3.03
CBX4-202ENST00000448310 DCTPP1Q9H773 170 aa33.98■■■■□ 3.03
CBX4-202ENST00000448310 ZNFX1Q9P2E3 1918 aaKnown RBP33.97■■■■□ 3.03
CBX4-202ENST00000448310 A0A1W2PPC1 479 aa33.97■■■■□ 3.03
CBX4-202ENST00000448310 EEF2P13639 858 aaKnown RBP33.97■■■■□ 3.03
CBX4-202ENST00000448310 TRPV1Q8NER1 839 aa33.97■■■■□ 3.03
CBX4-202ENST00000448310 GDF15Q99988 308 aa33.97■■■■□ 3.03
CBX4-202ENST00000448310 MB21D1Q8N884 522 aa33.96■■■■□ 3.03
CBX4-202ENST00000448310 SHCBP1Q8NEM2 672 aa33.96■■■■□ 3.03
CBX4-202ENST00000448310 STRBPQ96SI9 672 aaKnown RBP33.96■■■■□ 3.03
CBX4-202ENST00000448310 DDX20Q9UHI6 824 aaKnown RBP33.96■■■■□ 3.03
CBX4-202ENST00000448310 GREB1LQ9C091 1923 aaPredicted RBP33.95■■■■□ 3.03
CBX4-202ENST00000448310 SOX1O00570 391 aaPredicted RBP33.95■■■■□ 3.03
CBX4-202ENST00000448310 WDR46O15213 610 aaKnown RBP33.95■■■■□ 3.03
CBX4-202ENST00000448310 NCAPG2Q86XI2 1143 aa33.95■■■■□ 3.03
CBX4-202ENST00000448310 STK11IPQ8N1F8 1099 aa33.95■■■■□ 3.03
CBX4-202ENST00000448310 KBTBD3Q8NAB2 608 aa33.95■■■■□ 3.03
CBX4-202ENST00000448310 ARPP21Q9UBL0 812 aaPredicted RBP33.95■■■■□ 3.03
CBX4-202ENST00000448310 LRRC26Q2I0M4 334 aa33.94■■■■□ 3.02
CBX4-202ENST00000448310 OSBP2Q969R2 916 aa33.94■■■■□ 3.02
CBX4-202ENST00000448310 KANSL2Q9H9L4 492 aa33.94■■■■□ 3.02
CBX4-202ENST00000448310 LAMA3Q16787 3333 aa33.93■■■■□ 3.02
CBX4-202ENST00000448310 STRNO43815 780 aa33.93■■■■□ 3.02
CBX4-202ENST00000448310 COBLO75128 1261 aa33.93■■■■□ 3.02
CBX4-202ENST00000448310 IGHA2P01877 340 aa33.93■■■■□ 3.02
CBX4-202ENST00000448310 GPATCH3Q96I76 525 aa33.93■■■■□ 3.02
CBX4-202ENST00000448310 FBXO28Q9NVF7 368 aa33.93■■■■□ 3.02
CBX4-202ENST00000448310 GSG1L2A8MUP6 293 aa33.92■■■■□ 3.02
CBX4-202ENST00000448310 RAD21O60216 631 aa33.92■■■■□ 3.02
CBX4-202ENST00000448310 CYBAP13498 195 aa33.92■■■■□ 3.02
CBX4-202ENST00000448310 MAGEA10P43363 369 aaPredicted RBP33.92■■■■□ 3.02
CBX4-202ENST00000448310 LRCH3Q96II8 777 aa33.92■■■■□ 3.02
CBX4-202ENST00000448310 GNL3Q9BVP2 549 aaKnown RBP eCLIP33.92■■■■□ 3.02
CBX4-202ENST00000448310 BMP8BP34820 402 aa33.91■■■■□ 3.02
CBX4-202ENST00000448310 TMEM132BQ14DG7 1078 aa33.91■■■■□ 3.02
CBX4-202ENST00000448310 MROH8Q9H579 483 aa33.91■■■■□ 3.02
CBX4-202ENST00000448310 OLFML2BQ68BL8 750 aa33.9■■■■□ 3.02
CBX4-202ENST00000448310 APPBP2Q92624 585 aa33.9■■■■□ 3.02
CBX4-202ENST00000448310 SENP6Q9GZR1 1112 aaPredicted RBP33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms