RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 HDAC5Q9UQL6 1122 aa8.73□□□□□ -1.01
LRRC28-203ENST00000447360 MYH13Q9UKX3 1938 aa8.73□□□□□ -1.01
LRRC28-203ENST00000447360 UBTFL1P0CB47 393 aaPredicted RBP8.72□□□□□ -1.01
LRRC28-203ENST00000447360 VCAM1P19320 739 aa8.72□□□□□ -1.01
LRRC28-203ENST00000447360 ADORA2AP29274 412 aa8.72□□□□□ -1.01
LRRC28-203ENST00000447360 PPP4CP60510 307 aa8.72□□□□□ -1.01
LRRC28-203ENST00000447360 SHROOM1Q2M3G4 852 aaPredicted RBP8.72□□□□□ -1.01
LRRC28-203ENST00000447360 ANO1Q5XXA6 986 aa8.72□□□□□ -1.01
LRRC28-203ENST00000447360 TBC1D9Q6ZT07 1266 aa8.72□□□□□ -1.01
LRRC28-203ENST00000447360 PPM1EQ8WY54 764 aa8.72□□□□□ -1.01
LRRC28-203ENST00000447360 FERMT2Q96AC1 680 aa8.72□□□□□ -1.01
LRRC28-203ENST00000447360 TOX2Q96NM4 488 aa8.72□□□□□ -1.01
LRRC28-203ENST00000447360 FEZ1Q99689 392 aa8.72□□□□□ -1.01
LRRC28-203ENST00000447360 KIAA1683Q9H0B3 1180 aa8.72□□□□□ -1.01
LRRC28-203ENST00000447360 TMEM39AQ9NV64 488 aa8.72□□□□□ -1.01
LRRC28-203ENST00000447360 DAXXQ9UER7 740 aaPredicted RBP8.72□□□□□ -1.01
LRRC28-203ENST00000447360 PA2G4Q9UQ80 394 aaKnown RBP8.72□□□□□ -1.01
LRRC28-203ENST00000447360 FLT1P17948 1338 aa8.72□□□□□ -1.01
LRRC28-203ENST00000447360 SPDYE16A6NNV3 312 aaPredicted RBP8.71□□□□□ -1.02
LRRC28-203ENST00000447360 IGSF3O75054 1194 aa8.71□□□□□ -1.02
LRRC28-203ENST00000447360 GH2P01242 217 aa8.71□□□□□ -1.02
LRRC28-203ENST00000447360 HLA-DOAP06340 250 aa8.71□□□□□ -1.02
LRRC28-203ENST00000447360 FAM47AQ5JRC9 791 aa8.71□□□□□ -1.02
LRRC28-203ENST00000447360 TATDN1Q6P1N9 297 aa8.71□□□□□ -1.02
LRRC28-203ENST00000447360 CCDC174Q6PII3 467 aa8.71□□□□□ -1.02
LRRC28-203ENST00000447360 ANKRD33Q7Z3H0 272 aa8.71□□□□□ -1.02
LRRC28-203ENST00000447360 RNF180Q86T96 592 aa8.71□□□□□ -1.02
LRRC28-203ENST00000447360 MAPKAPK5Q8IW41 473 aa8.71□□□□□ -1.02
LRRC28-203ENST00000447360 ABRAQ8N0Z2 381 aa8.71□□□□□ -1.02
LRRC28-203ENST00000447360 SHCBP1Q8NEM2 672 aa8.71□□□□□ -1.02
LRRC28-203ENST00000447360 TGFBRAP1Q8WUH2 860 aa8.71□□□□□ -1.02
LRRC28-203ENST00000447360 AATFQ9NY61 560 aaKnown RBP eCLIP8.71□□□□□ -1.02
LRRC28-203ENST00000447360 HOXC10Q9NYD6 342 aa8.71□□□□□ -1.02
LRRC28-203ENST00000447360 LRP2BPQ9P2M1 347 aa8.71□□□□□ -1.02
LRRC28-203ENST00000447360 NRBP1Q9UHY1 535 aa8.71□□□□□ -1.02
LRRC28-203ENST00000447360 PALD1Q9ULE6 856 aa8.71□□□□□ -1.02
LRRC28-203ENST00000447360 RLFQ13129 1914 aa8.7□□□□□ -1.02
LRRC28-203ENST00000447360 DCDC2CA8MYV0 355 aa8.7□□□□□ -1.02
LRRC28-203ENST00000447360 PQBP1O60828 265 aaKnown RBP8.7□□□□□ -1.02
LRRC28-203ENST00000447360 COBLO75128 1261 aa8.7□□□□□ -1.02
LRRC28-203ENST00000447360 TIMP1P01033 207 aa8.7□□□□□ -1.02
LRRC28-203ENST00000447360 RARBP10826 455 aa8.7□□□□□ -1.02
LRRC28-203ENST00000447360 ARID4AP29374 1257 aaPredicted RBP8.7□□□□□ -1.02
LRRC28-203ENST00000447360 FAAP100Q0VG06 881 aa8.7□□□□□ -1.02
LRRC28-203ENST00000447360 TFCP2Q12800 502 aa8.7□□□□□ -1.02
LRRC28-203ENST00000447360 COG2Q14746 738 aa8.7□□□□□ -1.02
LRRC28-203ENST00000447360 ZYXQ15942 572 aaKnown RBP8.7□□□□□ -1.02
LRRC28-203ENST00000447360 GORABQ5T7V8 394 aa8.7□□□□□ -1.02
LRRC28-203ENST00000447360 RASIP1Q5U651 963 aa8.7□□□□□ -1.02
LRRC28-203ENST00000447360 NAA16Q6N069 864 aaPredicted RBP8.7□□□□□ -1.02
LRRC28-203ENST00000447360 PI16Q6UXB8 463 aa8.7□□□□□ -1.02
LRRC28-203ENST00000447360 SLC44A5Q8NCS7 719 aa8.7□□□□□ -1.02
LRRC28-203ENST00000447360 NEUROD6Q96NK8 337 aa8.7□□□□□ -1.02
LRRC28-203ENST00000447360 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.7□□□□□ -1.02
LRRC28-203ENST00000447360 MOV10L1Q9BXT6 1211 aaKnown RBP8.7□□□□□ -1.02
LRRC28-203ENST00000447360 PBX4Q9BYU1 374 aa8.7□□□□□ -1.02
LRRC28-203ENST00000447360 SPATC1LQ9H0A9 340 aa8.7□□□□□ -1.02
LRRC28-203ENST00000447360 TSPYL2Q9H2G4 693 aaPredicted RBP8.7□□□□□ -1.02
LRRC28-203ENST00000447360 PRDM12Q9H4Q4 367 aa8.7□□□□□ -1.02
LRRC28-203ENST00000447360 MROH8Q9H579 483 aa8.7□□□□□ -1.02
LRRC28-203ENST00000447360 RPAP3Q9H6T3 665 aaPredicted RBP8.7□□□□□ -1.02
LRRC28-203ENST00000447360 XPNPEP3Q9NQH7 507 aa8.7□□□□□ -1.02
LRRC28-203ENST00000447360 CXXC1Q9P0U4 656 aaPredicted RBP8.7□□□□□ -1.02
LRRC28-203ENST00000447360 HCN4Q9Y3Q4 1203 aa8.7□□□□□ -1.02
LRRC28-203ENST00000447360 FRMPD3Q5JV73 1810 aa8.7□□□□□ -1.02
LRRC28-203ENST00000447360 REV3LO60673 3130 aa8.69□□□□□ -1.02
LRRC28-203ENST00000447360 A0A1W2PQ45 241 aaPredicted RBP8.69□□□□□ -1.02
LRRC28-203ENST00000447360 A0A1W2PQY0 241 aa8.69□□□□□ -1.02
LRRC28-203ENST00000447360 UQCRFS1P1P0C7P4 283 aa8.69□□□□□ -1.02
LRRC28-203ENST00000447360 BMP1P13497 986 aa8.69□□□□□ -1.02
LRRC28-203ENST00000447360 ERCC3P19447 782 aa8.69□□□□□ -1.02
LRRC28-203ENST00000447360 PBX2P40425 430 aa8.69□□□□□ -1.02
LRRC28-203ENST00000447360 MCAMP43121 646 aa8.69□□□□□ -1.02
LRRC28-203ENST00000447360 ADGRE1Q14246 886 aa8.69□□□□□ -1.02
LRRC28-203ENST00000447360 RAB3GAP1Q15042 981 aa8.69□□□□□ -1.02
LRRC28-203ENST00000447360 AAK1Q2M2I8 961 aa8.69□□□□□ -1.02
LRRC28-203ENST00000447360 PRAMEF19Q5SWL8 479 aa8.69□□□□□ -1.02
LRRC28-203ENST00000447360 MFSD5Q6N075 450 aa8.69□□□□□ -1.02
LRRC28-203ENST00000447360 CCDC129Q6ZRS4 1044 aa8.69□□□□□ -1.02
LRRC28-203ENST00000447360 FAM9BQ8IZU0 186 aa8.69□□□□□ -1.02
LRRC28-203ENST00000447360 MB21D1Q8N884 522 aa8.69□□□□□ -1.02
LRRC28-203ENST00000447360 SPDYE1Q8NFV5 336 aaPredicted RBP8.69□□□□□ -1.02
LRRC28-203ENST00000447360 NUP133Q8WUM0 1156 aa8.69□□□□□ -1.02
LRRC28-203ENST00000447360 SSH1Q8WYL5 1049 aa8.69□□□□□ -1.02
LRRC28-203ENST00000447360 MAML3Q96JK9 1138 aa8.69□□□□□ -1.02
LRRC28-203ENST00000447360 TSEN34Q9BSV6 310 aaKnown RBP8.69□□□□□ -1.02
LRRC28-203ENST00000447360 ATAD5Q96QE3 1844 aa8.68□□□□□ -1.02
LRRC28-203ENST00000447360 IGFBP4P22692 258 aa8.68□□□□□ -1.02
LRRC28-203ENST00000447360 PPIGQ13427 754 aaKnown RBP eCLIP8.68□□□□□ -1.02
LRRC28-203ENST00000447360 RAB30Q15771 203 aa8.68□□□□□ -1.02
LRRC28-203ENST00000447360 CCDC85BQ15834 202 aaPredicted RBP8.68□□□□□ -1.02
LRRC28-203ENST00000447360 CERKLQ49MI3 558 aaPredicted RBP8.68□□□□□ -1.02
LRRC28-203ENST00000447360 TMEM240Q5SV17 173 aa8.68□□□□□ -1.02
LRRC28-203ENST00000447360 POTEHQ6S545 545 aa8.68□□□□□ -1.02
LRRC28-203ENST00000447360 C16orf59Q7L2K0 433 aa8.68□□□□□ -1.02
LRRC28-203ENST00000447360 CERS3Q8IU89 383 aa8.68□□□□□ -1.02
LRRC28-203ENST00000447360 ACER1Q8TDN7 264 aa8.68□□□□□ -1.02
LRRC28-203ENST00000447360 EHD4Q9H223 541 aa8.68□□□□□ -1.02
LRRC28-203ENST00000447360 CABP5Q9NP86 173 aa8.68□□□□□ -1.02
LRRC28-203ENST00000447360 STARD7Q9NQZ5 370 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms