RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 BANK1Q8NDB2 785 aa4.33□□□□□ -1.72
PMS1-215ENST00000447232 PRMT6Q96LA8 375 aaPredicted RBP4.33□□□□□ -1.72
PMS1-215ENST00000447232 FBXL18Q96ME1 805 aa4.33□□□□□ -1.72
PMS1-215ENST00000447232 ZNF576Q9H609 170 aa4.33□□□□□ -1.72
PMS1-215ENST00000447232 DIAPH1O60610 1272 aaKnown RBP4.33□□□□□ -1.72
PMS1-215ENST00000447232 RNF144AP50876 292 aaPredicted RBP4.33□□□□□ -1.72
PMS1-215ENST00000447232 PDE3AQ14432 1141 aa4.33□□□□□ -1.72
PMS1-215ENST00000447232 MAP3K21Q5TCX8 1036 aa4.33□□□□□ -1.72
PMS1-215ENST00000447232 TTLL5Q6EMB2 1281 aa4.33□□□□□ -1.72
PMS1-215ENST00000447232 MCM10Q7L590 875 aa4.33□□□□□ -1.72
PMS1-215ENST00000447232 LYSMD3Q7Z3D4 306 aa4.33□□□□□ -1.72
PMS1-215ENST00000447232 PHACTR3Q96KR7 559 aa4.33□□□□□ -1.72
PMS1-215ENST00000447232 COA1Q9GZY4 146 aa4.33□□□□□ -1.72
PMS1-215ENST00000447232 ZNF318Q5VUA4 2279 aa4.33□□□□□ -1.72
PMS1-215ENST00000447232 C5orf42Q9H799 3197 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 ATP5J2-PTCD1G3V325 749 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 TNPO2O14787 897 aaKnown RBP4.32□□□□□ -1.72
PMS1-215ENST00000447232 MYO1BO43795 1136 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 KCNQ1P51787 676 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 ERVK-9P63128 1117 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 NR1H3Q13133 447 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 ADGRE1Q14246 886 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 SV2AQ7L0J3 742 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 PRICKLE2Q7Z3G6 844 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 CERS5Q8N5B7 392 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 PARK7Q99497 189 aaKnown RBP4.32□□□□□ -1.72
PMS1-215ENST00000447232 GAS2L1Q99501 681 aaPredicted RBP4.32□□□□□ -1.72
PMS1-215ENST00000447232 VEZTQ9HBM0 779 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 SEC31BQ9NQW1 1179 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 KCNH4Q9UQ05 1017 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 MYO9BQ13459 2157 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 LRRC37A2A6NM11 1700 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 CHD7Q9P2D1 2997 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 DCHS1Q96JQ0 3298 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 A0A1W2PRU2 124 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 CDC14CA4D256 554 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 CYP2C8P10632 490 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 GSK3AP49840 483 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 EIF4A1P60842 406 aaKnown RBP4.32□□□□□ -1.72
PMS1-215ENST00000447232 TFF2Q03403 129 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 PPATQ06203 517 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 TAF7Q15545 349 aaPredicted RBP4.32□□□□□ -1.72
PMS1-215ENST00000447232 CFAP100Q494V2 611 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 TXNRD3Q86VQ6 643 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.32□□□□□ -1.72
PMS1-215ENST00000447232 FAM89AQ96GI7 184 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 THUMPD2Q9BTF0 503 aaKnown RBP4.32□□□□□ -1.72
PMS1-215ENST00000447232 SNRKQ9NRH2 765 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 CUEDC1Q9NWM3 386 aaPredicted RBP4.32□□□□□ -1.72
PMS1-215ENST00000447232 FRMPD3Q5JV73 1810 aa4.32□□□□□ -1.72
PMS1-215ENST00000447232 EPG5Q9HCE0 2579 aa4.31□□□□□ -1.72
PMS1-215ENST00000447232 PLXNB2O15031 1838 aa4.31□□□□□ -1.72
PMS1-215ENST00000447232 SLURP2P0DP57 97 aa4.31□□□□□ -1.72
PMS1-215ENST00000447232 SCTRP47872 440 aa4.31□□□□□ -1.72
PMS1-215ENST00000447232 TNFAIP1Q13829 316 aa4.31□□□□□ -1.72
PMS1-215ENST00000447232 AAK1Q2M2I8 961 aa4.31□□□□□ -1.72
PMS1-215ENST00000447232 PROSER3Q2NL68 480 aa4.31□□□□□ -1.72
PMS1-215ENST00000447232 GPAT2Q6NUI2 795 aa4.31□□□□□ -1.72
PMS1-215ENST00000447232 KRTAP1-3Q8IUG1 177 aa4.31□□□□□ -1.72
PMS1-215ENST00000447232 MIS18AQ9NYP9 233 aa4.31□□□□□ -1.72
PMS1-215ENST00000447232 ZFHX4Q86UP3 3567 aa4.31□□□□□ -1.72
PMS1-215ENST00000447232 AK9Q5TCS8 1911 aa4.31□□□□□ -1.72
PMS1-215ENST00000447232 KRT37O76014 449 aa4.31□□□□□ -1.72
PMS1-215ENST00000447232 MCCD1P59942 119 aaPredicted RBP4.31□□□□□ -1.72
PMS1-215ENST00000447232 GTF2IP78347 998 aa4.31□□□□□ -1.72
PMS1-215ENST00000447232 DCTN1Q14203 1278 aa4.31□□□□□ -1.72
PMS1-215ENST00000447232 CCDC85BQ15834 202 aaPredicted RBP4.31□□□□□ -1.72
PMS1-215ENST00000447232 RNF20Q5VTR2 975 aa4.31□□□□□ -1.72
PMS1-215ENST00000447232 BADQ92934 168 aa4.31□□□□□ -1.72
PMS1-215ENST00000447232 ZKSCAN4Q969J2 545 aaPredicted RBP4.31□□□□□ -1.72
PMS1-215ENST00000447232 TIFAQ96CG3 184 aa4.31□□□□□ -1.72
PMS1-215ENST00000447232 PRDM12Q9H4Q4 367 aa4.31□□□□□ -1.72
PMS1-215ENST00000447232 PANK3Q9H999 370 aa4.31□□□□□ -1.72
PMS1-215ENST00000447232 GJD2Q9UKL4 321 aa4.31□□□□□ -1.72
PMS1-215ENST00000447232 RLFQ13129 1914 aa4.31□□□□□ -1.72
PMS1-215ENST00000447232 ERC2O15083 957 aa4.3□□□□□ -1.72
PMS1-215ENST00000447232 GPC1P35052 558 aa4.3□□□□□ -1.72
PMS1-215ENST00000447232 KCNMA1Q12791 1236 aa4.3□□□□□ -1.72
PMS1-215ENST00000447232 ZNF385CQ66K41 422 aaPredicted RBP4.3□□□□□ -1.72
PMS1-215ENST00000447232 COPS6Q7L5N1 327 aa4.3□□□□□ -1.72
PMS1-215ENST00000447232 ERMP1Q7Z2K6 904 aa4.3□□□□□ -1.72
PMS1-215ENST00000447232 WHAMMQ8TF30 809 aa4.3□□□□□ -1.72
PMS1-215ENST00000447232 COL26A1Q96A83 441 aa4.3□□□□□ -1.72
PMS1-215ENST00000447232 COA7Q96BR5 231 aa4.3□□□□□ -1.72
PMS1-215ENST00000447232 RNPC3Q96LT9 517 aaKnown RBP4.3□□□□□ -1.72
PMS1-215ENST00000447232 WRNIP1Q96S55 665 aa4.3□□□□□ -1.72
PMS1-215ENST00000447232 ISCA1Q9BUE6 129 aa4.3□□□□□ -1.72
PMS1-215ENST00000447232 TMEM39BQ9GZU3 492 aa4.3□□□□□ -1.72
PMS1-215ENST00000447232 PRKAG2Q9UGJ0 569 aa4.3□□□□□ -1.72
PMS1-215ENST00000447232 ADAMTS8Q9UP79 889 aa4.3□□□□□ -1.72
PMS1-215ENST00000447232 CHD8Q9HCK8 2581 aa4.3□□□□□ -1.72
PMS1-215ENST00000447232 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.3□□□□□ -1.72
PMS1-215ENST00000447232 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.3□□□□□ -1.72
PMS1-215ENST00000447232 MEN1O00255 615 aa4.3□□□□□ -1.72
PMS1-215ENST00000447232 IRS4O14654 1257 aaPredicted RBP4.3□□□□□ -1.72
PMS1-215ENST00000447232 HTATSF1O43719 755 aaKnown RBP4.3□□□□□ -1.72
PMS1-215ENST00000447232 RHOQP17081 205 aa4.3□□□□□ -1.72
PMS1-215ENST00000447232 EPHB4P54760 987 aa4.3□□□□□ -1.72
PMS1-215ENST00000447232 TRIB2Q92519 343 aa4.3□□□□□ -1.72
PMS1-215ENST00000447232 RTF1Q92541 710 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms