RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 TNMDQ9H2S6 317 aa14.97□□□□□ -0.01
DDX56-206ENST00000446987 CLSTN2Q9H4D0 955 aa14.97□□□□□ -0.01
DDX56-206ENST00000446987 SUFUQ9UMX1 484 aa14.97□□□□□ -0.01
DDX56-206ENST00000446987 OTOFQ9HC10 1997 aa14.97□□□□□ -0.01
DDX56-206ENST00000446987 SIPA1L1O43166 1804 aa14.96□□□□□ -0.01
DDX56-206ENST00000446987 CCDC69A6NI79 296 aa14.96□□□□□ -0.01
DDX56-206ENST00000446987 ZNF165P49910 485 aa14.96□□□□□ -0.01
DDX56-206ENST00000446987 PDE1AP54750 535 aa14.96□□□□□ -0.01
DDX56-206ENST00000446987 RHBDL3P58872 404 aa14.96□□□□□ -0.01
DDX56-206ENST00000446987 CST9Q5W186 159 aa14.96□□□□□ -0.01
DDX56-206ENST00000446987 CDC42EP5Q6NZY7 148 aa14.96□□□□□ -0.01
DDX56-206ENST00000446987 ANKRD20A12PQ8NF67 263 aa14.96□□□□□ -0.01
DDX56-206ENST00000446987 DCPSQ96C86 337 aaKnown RBP14.96□□□□□ -0.01
DDX56-206ENST00000446987 PAG1Q9NWQ8 432 aa14.96□□□□□ -0.01
DDX56-206ENST00000446987 LRP2BPQ9P2M1 347 aa14.96□□□□□ -0.01
DDX56-206ENST00000446987 GPR75-ASB3A0A0A6YYF3 556 aa14.95□□□□□ -0.02
DDX56-206ENST00000446987 TCRBV5S4A2TA0A5A2 114 aa14.95□□□□□ -0.02
DDX56-206ENST00000446987 BTDP43251 543 aa14.95□□□□□ -0.02
DDX56-206ENST00000446987 TDO2P48775 406 aa14.95□□□□□ -0.02
DDX56-206ENST00000446987 A1CFQ9NQ94 594 aaKnown RBP14.95□□□□□ -0.02
DDX56-206ENST00000446987 DNAI1Q9UI46 699 aa14.95□□□□□ -0.02
DDX56-206ENST00000446987 A0A087WUV0 522 aaPredicted RBP14.95□□□□□ -0.02
DDX56-206ENST00000446987 SGSM2O43147 1006 aa14.95□□□□□ -0.02
DDX56-206ENST00000446987 NRDCO43847 1150 aa14.95□□□□□ -0.02
DDX56-206ENST00000446987 IDH1O75874 414 aaKnown RBP14.95□□□□□ -0.02
DDX56-206ENST00000446987 HSPA6P17066 643 aa14.95□□□□□ -0.02
DDX56-206ENST00000446987 HSPA4P34932 840 aa14.95□□□□□ -0.02
DDX56-206ENST00000446987 NFIAQ12857 509 aa14.95□□□□□ -0.02
DDX56-206ENST00000446987 LRRFIP1Q32MZ4 808 aaKnown RBP14.95□□□□□ -0.02
DDX56-206ENST00000446987 PRAMEF18Q5VWM3 479 aa14.95□□□□□ -0.02
DDX56-206ENST00000446987 APOBEC3FQ8IUX4 373 aaKnown RBP14.95□□□□□ -0.02
DDX56-206ENST00000446987 CCDC150Q8NCX0 1101 aa14.95□□□□□ -0.02
DDX56-206ENST00000446987 CDCA5Q96FF9 252 aa14.95□□□□□ -0.02
DDX56-206ENST00000446987 ARFGAP3Q9NP61 516 aa14.95□□□□□ -0.02
DDX56-206ENST00000446987 TOMM22Q9NS69 142 aa14.95□□□□□ -0.02
DDX56-206ENST00000446987 LIMCH1Q9UPQ0 1083 aa14.95□□□□□ -0.02
DDX56-206ENST00000446987 SMC3Q9UQE7 1217 aa14.95□□□□□ -0.02
DDX56-206ENST00000446987 LMAN1P49257 510 aa14.94□□□□□ -0.02
DDX56-206ENST00000446987 KRT85P78386 507 aa14.94□□□□□ -0.02
DDX56-206ENST00000446987 HTRA3P83110 453 aa14.94□□□□□ -0.02
DDX56-206ENST00000446987 NAA16Q6N069 864 aaPredicted RBP14.94□□□□□ -0.02
DDX56-206ENST00000446987 SULF1Q8IWU6 871 aa14.94□□□□□ -0.02
DDX56-206ENST00000446987 STAG1Q8WVM7 1258 aa14.94□□□□□ -0.02
DDX56-206ENST00000446987 GPATCH3Q96I76 525 aa14.94□□□□□ -0.02
DDX56-206ENST00000446987 TEPSINQ96N21 525 aa14.94□□□□□ -0.02
DDX56-206ENST00000446987 VEZTQ9HBM0 779 aa14.94□□□□□ -0.02
DDX56-206ENST00000446987 FAM198AQ9UFP1 575 aa14.94□□□□□ -0.02
DDX56-206ENST00000446987 PALD1Q9ULE6 856 aa14.94□□□□□ -0.02
DDX56-206ENST00000446987 MTMR6Q9Y217 621 aa14.94□□□□□ -0.02
DDX56-206ENST00000446987 GOLGA6L19H0YKK7 550 aa14.93□□□□□ -0.02
DDX56-206ENST00000446987 MAP2K7O14733 419 aa14.93□□□□□ -0.02
DDX56-206ENST00000446987 PPP1R12AO14974 1030 aaPredicted RBP14.93□□□□□ -0.02
DDX56-206ENST00000446987 WDHD1O75717 1129 aaPredicted RBP14.93□□□□□ -0.02
DDX56-206ENST00000446987 GLRX3O76003 335 aaKnown RBP14.93□□□□□ -0.02
DDX56-206ENST00000446987 MAP4K4O95819 1239 aaPredicted RBP14.93□□□□□ -0.02
DDX56-206ENST00000446987 PDE6AP16499 860 aa14.93□□□□□ -0.02
DDX56-206ENST00000446987 APLP1P51693 650 aa14.93□□□□□ -0.02
DDX56-206ENST00000446987 IQCB1Q15051 598 aa14.93□□□□□ -0.02
DDX56-206ENST00000446987 FOXD4L6Q3SYB3 417 aaPredicted RBP14.93□□□□□ -0.02
DDX56-206ENST00000446987 FOXD4L3Q6VB84 417 aaPredicted RBP14.93□□□□□ -0.02
DDX56-206ENST00000446987 MAGEB6Q8N7X4 407 aa14.93□□□□□ -0.02
DDX56-206ENST00000446987 TTC14Q96N46 770 aa14.93□□□□□ -0.02
DDX56-206ENST00000446987 SCAND2PQ9GZW5 306 aaPredicted RBP14.93□□□□□ -0.02
DDX56-206ENST00000446987 DEFB129Q9H1M3 183 aa14.93□□□□□ -0.02
DDX56-206ENST00000446987 DDX4Q9NQI0 724 aaKnown RBP14.93□□□□□ -0.02
DDX56-206ENST00000446987 NAV1Q8NEY1 1877 aa14.93□□□□□ -0.02
DDX56-206ENST00000446987 CCDC189A1A4V9 331 aa14.93□□□□□ -0.02
DDX56-206ENST00000446987 TCP10L2B9ZVM9 353 aa14.93□□□□□ -0.02
DDX56-206ENST00000446987 MYO1BO43795 1136 aa14.93□□□□□ -0.02
DDX56-206ENST00000446987 SASH3O75995 380 aa14.93□□□□□ -0.02
DDX56-206ENST00000446987 ETF1P62495 437 aaKnown RBP14.93□□□□□ -0.02
DDX56-206ENST00000446987 DNM1Q05193 864 aaKnown RBP14.93□□□□□ -0.02
DDX56-206ENST00000446987 TTF1Q15361 905 aaPredicted RBP14.93□□□□□ -0.02
DDX56-206ENST00000446987 PPP1R13BQ96KQ4 1090 aa14.93□□□□□ -0.02
DDX56-206ENST00000446987 ZSCAN31Q96LW9 406 aaPredicted RBP14.93□□□□□ -0.02
DDX56-206ENST00000446987 FUT8Q9BYC5 575 aa14.93□□□□□ -0.02
DDX56-206ENST00000446987 ADD2P35612 726 aa14.92□□□□□ -0.02
DDX56-206ENST00000446987 RASA3Q14644 834 aa14.92□□□□□ -0.02
DDX56-206ENST00000446987 BRD3Q15059 726 aa14.92□□□□□ -0.02
DDX56-206ENST00000446987 FKBP1CQ5VVH2 108 aa14.92□□□□□ -0.02
DDX56-206ENST00000446987 HNRNPLLQ8WVV9 542 aaKnown RBP14.92□□□□□ -0.02
DDX56-206ENST00000446987 TMEM39BQ9GZU3 492 aa14.92□□□□□ -0.02
DDX56-206ENST00000446987 CTAGE5O15320 804 aa14.91□□□□□ -0.02
DDX56-206ENST00000446987 CYP7A1P22680 504 aa14.91□□□□□ -0.02
DDX56-206ENST00000446987 PPP4CP60510 307 aa14.91□□□□□ -0.02
DDX56-206ENST00000446987 DYNLL1P63167 89 aaKnown RBP14.91□□□□□ -0.02
DDX56-206ENST00000446987 TUBB4BP68371 445 aa14.91□□□□□ -0.02
DDX56-206ENST00000446987 GSTO1P78417 241 aa14.91□□□□□ -0.02
DDX56-206ENST00000446987 MAP3K12Q12852 859 aa14.91□□□□□ -0.02
DDX56-206ENST00000446987 ATRNL1Q5VV63 1379 aa14.91□□□□□ -0.02
DDX56-206ENST00000446987 E4F1Q66K89 784 aaPredicted RBP14.91□□□□□ -0.02
DDX56-206ENST00000446987 TADA2BQ86TJ2 420 aa14.91□□□□□ -0.02
DDX56-206ENST00000446987 ZFPM1Q8IX07 1006 aa14.91□□□□□ -0.02
DDX56-206ENST00000446987 KBTBD3Q8NAB2 608 aa14.91□□□□□ -0.02
DDX56-206ENST00000446987 RIOK1Q9BRS2 568 aaKnown RBP14.91□□□□□ -0.02
DDX56-206ENST00000446987 IDI2Q9BXS1 227 aa14.91□□□□□ -0.02
DDX56-206ENST00000446987 ZNF532Q9HCE3 1301 aa14.91□□□□□ -0.02
DDX56-206ENST00000446987 SH2B1Q9NRF2 756 aaPredicted RBP14.91□□□□□ -0.02
DDX56-206ENST00000446987 USP40Q9NVE5 1235 aa14.91□□□□□ -0.02
DDX56-206ENST00000446987 AATFQ9NY61 560 aaKnown RBP eCLIP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms