RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 POTEB2H3BUK9 544 aa29.53■■■□□ 2.32
PMS1-214ENST00000446877 CYBAP13498 195 aa29.53■■■□□ 2.32
PMS1-214ENST00000446877 GABPAQ06546 454 aa29.53■■■□□ 2.32
PMS1-214ENST00000446877 CEP85Q6P2H3 762 aa29.53■■■□□ 2.32
PMS1-214ENST00000446877 ATP11BQ9Y2G3 1177 aa29.53■■■□□ 2.32
PMS1-214ENST00000446877 A0A1W2PRG0 241 aa29.52■■■□□ 2.32
PMS1-214ENST00000446877 MYCNP04198 464 aaPredicted RBP29.52■■■□□ 2.32
PMS1-214ENST00000446877 HSP90AB4PQ58FF6 505 aa29.52■■■□□ 2.32
PMS1-214ENST00000446877 MB21D1Q8N884 522 aa29.52■■■□□ 2.32
PMS1-214ENST00000446877 SHCBP1Q8NEM2 672 aa29.52■■■□□ 2.32
PMS1-214ENST00000446877 MYH1P12882 1939 aa29.51■■■□□ 2.32
PMS1-214ENST00000446877 RLBP1P12271 317 aa29.51■■■□□ 2.31
PMS1-214ENST00000446877 PDE6AP16499 860 aa29.51■■■□□ 2.31
PMS1-214ENST00000446877 ERCC3P19447 782 aa29.51■■■□□ 2.31
PMS1-214ENST00000446877 PLS1Q14651 629 aa29.51■■■□□ 2.31
PMS1-214ENST00000446877 MYO5AQ9Y4I1 1855 aaKnown RBP29.51■■■□□ 2.31
PMS1-214ENST00000446877 IGHA2P01877 340 aa29.5■■■□□ 2.31
PMS1-214ENST00000446877 TMEM179Q6ZVK1 233 aa29.5■■■□□ 2.31
PMS1-214ENST00000446877 MROH8Q9H579 483 aa29.5■■■□□ 2.31
PMS1-214ENST00000446877 IL1RAPL2Q9NP60 686 aa29.5■■■□□ 2.31
PMS1-214ENST00000446877 SEPT4O43236 478 aa29.49■■■□□ 2.31
PMS1-214ENST00000446877 ANO1Q5XXA6 986 aa29.49■■■□□ 2.31
PMS1-214ENST00000446877 SLC39A5Q6ZMH5 540 aa29.49■■■□□ 2.31
PMS1-214ENST00000446877 FAM161BQ96MY7 647 aa29.49■■■□□ 2.31
PMS1-214ENST00000446877 SWAP70Q9UH65 585 aa29.49■■■□□ 2.31
PMS1-214ENST00000446877 ZNF532Q9HCE3 1301 aa29.48■■■□□ 2.31
PMS1-214ENST00000446877 NCAPG2Q86XI2 1143 aa29.48■■■□□ 2.31
PMS1-214ENST00000446877 GUCD1Q96NT3 240 aa29.48■■■□□ 2.31
PMS1-214ENST00000446877 SH2D4AQ9H788 454 aa29.48■■■□□ 2.31
PMS1-214ENST00000446877 ARHGEF10LQ9HCE6 1279 aa29.48■■■□□ 2.31
PMS1-214ENST00000446877 PRDM5Q9NQX1 630 aaPredicted RBP29.48■■■□□ 2.31
PMS1-214ENST00000446877 UNC80Q8N2C7 3258 aa29.47■■■□□ 2.31
PMS1-214ENST00000446877 COBLO75128 1261 aa29.47■■■□□ 2.31
PMS1-214ENST00000446877 FLOT1O75955 427 aa29.47■■■□□ 2.31
PMS1-214ENST00000446877 DSG3P32926 999 aa29.47■■■□□ 2.31
PMS1-214ENST00000446877 ZNF697Q5TEC3 545 aa29.47■■■□□ 2.31
PMS1-214ENST00000446877 ABRAQ8N0Z2 381 aa29.47■■■□□ 2.31
PMS1-214ENST00000446877 CLASRPQ8N2M8 674 aaKnown RBP29.47■■■□□ 2.31
PMS1-214ENST00000446877 SDR42E1Q8WUS8 393 aa29.47■■■□□ 2.31
PMS1-214ENST00000446877 DCP1AQ9NPI6 582 aaPredicted RBP29.47■■■□□ 2.31
PMS1-214ENST00000446877 GOLIM4O00461 696 aa29.46■■■□□ 2.31
PMS1-214ENST00000446877 EVX2Q03828 476 aa29.46■■■□□ 2.31
PMS1-214ENST00000446877 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.46■■■□□ 2.31
PMS1-214ENST00000446877 RHPN1Q8TCX5 695 aa29.46■■■□□ 2.31
PMS1-214ENST00000446877 DNAJC2Q99543 621 aaKnown RBP29.46■■■□□ 2.31
PMS1-214ENST00000446877 SAMD1Q6SPF0 538 aaPredicted RBP29.45■■■□□ 2.31
PMS1-214ENST00000446877 IFIT2P09913 472 aaKnown RBP29.44■■■□□ 2.3
PMS1-214ENST00000446877 CYP2D6P10635 497 aa29.44■■■□□ 2.3
PMS1-214ENST00000446877 FCER1AP12319 257 aa29.44■■■□□ 2.3
PMS1-214ENST00000446877 ADCYAP1R1P41586 468 aa29.44■■■□□ 2.3
PMS1-214ENST00000446877 PRAMEF19Q5SWL8 479 aa29.44■■■□□ 2.3
PMS1-214ENST00000446877 SPICE1Q8N0Z3 855 aa29.44■■■□□ 2.3
PMS1-214ENST00000446877 LCORLQ8N3X6 602 aa29.44■■■□□ 2.3
PMS1-214ENST00000446877 SLC44A5Q8NCS7 719 aa29.44■■■□□ 2.3
PMS1-214ENST00000446877 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.44■■■□□ 2.3
PMS1-214ENST00000446877 ICA1Q05084 483 aa29.43■■■□□ 2.3
PMS1-214ENST00000446877 SHHQ15465 462 aa29.43■■■□□ 2.3
PMS1-214ENST00000446877 TRIM60Q495X7 471 aa29.43■■■□□ 2.3
PMS1-214ENST00000446877 KIAA1755Q5JYT7 1200 aa29.43■■■□□ 2.3
PMS1-214ENST00000446877 ATG4CQ96DT6 458 aa29.43■■■□□ 2.3
PMS1-214ENST00000446877 DYNLL2Q96FJ2 89 aa29.43■■■□□ 2.3
PMS1-214ENST00000446877 TMX2Q9Y320 296 aa29.43■■■□□ 2.3
PMS1-214ENST00000446877 TCRBV5S4A2TA0A5A2 114 aa29.42■■■□□ 2.3
PMS1-214ENST00000446877 APBB1O00213 710 aa29.42■■■□□ 2.3
PMS1-214ENST00000446877 AMOTL1Q8IY63 956 aa29.42■■■□□ 2.3
PMS1-214ENST00000446877 BADQ92934 168 aa29.42■■■□□ 2.3
PMS1-214ENST00000446877 FERMT2Q96AC1 680 aa29.42■■■□□ 2.3
PMS1-214ENST00000446877 KIF1BPQ96EK5 621 aa29.42■■■□□ 2.3
PMS1-214ENST00000446877 MAML3Q96JK9 1138 aa29.42■■■□□ 2.3
PMS1-214ENST00000446877 BCL11AQ9H165 835 aa29.42■■■□□ 2.3
PMS1-214ENST00000446877 VCPKMTQ9H867 229 aa29.42■■■□□ 2.3
PMS1-214ENST00000446877 ARMT1Q9H993 441 aa29.42■■■□□ 2.3
PMS1-214ENST00000446877 SLC25A27O95847 323 aa29.41■■■□□ 2.3
PMS1-214ENST00000446877 AKR1B1P15121 316 aa29.41■■■□□ 2.3
PMS1-214ENST00000446877 LRRC41Q15345 812 aa29.41■■■□□ 2.3
PMS1-214ENST00000446877 CCDC17Q96LX7 622 aa29.41■■■□□ 2.3
PMS1-214ENST00000446877 COL25A1Q9BXS0 654 aaPredicted RBP29.41■■■□□ 2.3
PMS1-214ENST00000446877 ATP8A2Q9NTI2 1148 aa29.41■■■□□ 2.3
PMS1-214ENST00000446877 HNRNPUQ00839 825 aaKnown RBP eCLIP29.4■■■□□ 2.3
PMS1-214ENST00000446877 SNX17Q15036 470 aa29.4■■■□□ 2.3
PMS1-214ENST00000446877 SIAH1Q8IUQ4 282 aa29.4■■■□□ 2.3
PMS1-214ENST00000446877 WDR46O15213 610 aaKnown RBP29.39■■■□□ 2.3
PMS1-214ENST00000446877 CLEC10AQ8IUN9 316 aa29.39■■■□□ 2.3
PMS1-214ENST00000446877 PANK1Q8TE04 598 aa29.39■■■□□ 2.3
PMS1-214ENST00000446877 DDRGK1Q96HY6 314 aa29.39■■■□□ 2.3
PMS1-214ENST00000446877 NRBP1Q9UHY1 535 aa29.39■■■□□ 2.3
PMS1-214ENST00000446877 PRKAB2O43741 272 aa29.38■■■□□ 2.29
PMS1-214ENST00000446877 RARBP10826 455 aa29.38■■■□□ 2.29
PMS1-214ENST00000446877 FAM47AQ5JRC9 791 aa29.38■■■□□ 2.29
PMS1-214ENST00000446877 C9orf50Q5SZB4 431 aa29.38■■■□□ 2.29
PMS1-214ENST00000446877 C1orf53Q5VUE5 145 aa29.38■■■□□ 2.29
PMS1-214ENST00000446877 MMP19Q99542 508 aa29.38■■■□□ 2.29
PMS1-214ENST00000446877 CDX2Q99626 313 aaPredicted RBP29.38■■■□□ 2.29
PMS1-214ENST00000446877 PDLIM7Q9NR12 457 aa29.38■■■□□ 2.29
PMS1-214ENST00000446877 FRMPD3Q5JV73 1810 aa29.37■■■□□ 2.29
PMS1-214ENST00000446877 HMMRO75330 724 aa29.37■■■□□ 2.29
PMS1-214ENST00000446877 MBD4O95243 580 aa29.37■■■□□ 2.29
PMS1-214ENST00000446877 KCTD2Q14681 263 aa29.37■■■□□ 2.29
PMS1-214ENST00000446877 TMEM132BQ14DG7 1078 aa29.37■■■□□ 2.29
PMS1-214ENST00000446877 RNF180Q86T96 592 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms