RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 SPICE1Q8N0Z3 855 aa22.37■■□□□ 1.17
HDAC4-203ENST00000445704 PAGR1Q9BTK6 254 aa22.37■■□□□ 1.17
HDAC4-203ENST00000445704 SH2D4AQ9H788 454 aa22.37■■□□□ 1.17
HDAC4-203ENST00000445704 RLFQ13129 1914 aa22.36■■□□□ 1.17
HDAC4-203ENST00000445704 SPDYE16A6NNV3 312 aaPredicted RBP22.36■■□□□ 1.17
HDAC4-203ENST00000445704 ZNF444Q8N0Y2 327 aaPredicted RBP22.36■■□□□ 1.17
HDAC4-203ENST00000445704 GPRC5AQ8NFJ5 357 aa22.36■■□□□ 1.17
HDAC4-203ENST00000445704 RAET1EQ8TD07 263 aa22.36■■□□□ 1.17
HDAC4-203ENST00000445704 GTF3C2Q8WUA4 911 aaPredicted RBP22.36■■□□□ 1.17
HDAC4-203ENST00000445704 INCENPQ9NQS7 918 aa22.36■■□□□ 1.17
HDAC4-203ENST00000445704 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.36■■□□□ 1.17
HDAC4-203ENST00000445704 FGAP02671 866 aa22.35■■□□□ 1.17
HDAC4-203ENST00000445704 FLT3LGP49771 235 aa22.35■■□□□ 1.17
HDAC4-203ENST00000445704 ERVK-9P63128 1117 aa22.35■■□□□ 1.17
HDAC4-203ENST00000445704 ERVK-24P63145 666 aa22.35■■□□□ 1.17
HDAC4-203ENST00000445704 PDE4BQ07343 736 aa22.35■■□□□ 1.17
HDAC4-203ENST00000445704 CWC27Q6UX04 472 aaKnown RBP22.35■■□□□ 1.17
HDAC4-203ENST00000445704 LPAR1Q92633 364 aa22.35■■□□□ 1.17
HDAC4-203ENST00000445704 TANGO6Q9C0B7 1094 aa22.35■■□□□ 1.17
HDAC4-203ENST00000445704 ZNF287Q9HBT7 754 aa22.35■■□□□ 1.17
HDAC4-203ENST00000445704 DIAPH3Q9NSV4 1193 aa22.35■■□□□ 1.17
HDAC4-203ENST00000445704 PLIN4Q96Q06 1357 aa22.35■■□□□ 1.17
HDAC4-203ENST00000445704 SLC3A2P08195 630 aaKnown RBP22.34■■□□□ 1.17
HDAC4-203ENST00000445704 FAM47AQ5JRC9 791 aa22.34■■□□□ 1.17
HDAC4-203ENST00000445704 LBX2Q6XYB7 198 aa22.34■■□□□ 1.17
HDAC4-203ENST00000445704 COA7Q96BR5 231 aa22.34■■□□□ 1.17
HDAC4-203ENST00000445704 PORCNQ9H237 461 aa22.34■■□□□ 1.17
HDAC4-203ENST00000445704 BTBD7Q9P203 1132 aa22.34■■□□□ 1.17
HDAC4-203ENST00000445704 NYAP2Q9P242 653 aa22.34■■□□□ 1.17
HDAC4-203ENST00000445704 ANAPC4Q9UJX5 808 aa22.34■■□□□ 1.17
HDAC4-203ENST00000445704 RABGAP1Q9Y3P9 1069 aa22.34■■□□□ 1.17
HDAC4-203ENST00000445704 DOCK3Q8IZD9 2030 aa22.34■■□□□ 1.17
HDAC4-203ENST00000445704 A0A0G2JMZ2 1700 aa22.34■■□□□ 1.17
HDAC4-203ENST00000445704 PLXNB2O15031 1838 aa22.34■■□□□ 1.17
HDAC4-203ENST00000445704 POTEFA5A3E0 1075 aa22.33■■□□□ 1.17
HDAC4-203ENST00000445704 WDR46O15213 610 aaKnown RBP22.33■■□□□ 1.17
HDAC4-203ENST00000445704 MYCP01106 439 aaPredicted RBP22.33■■□□□ 1.17
HDAC4-203ENST00000445704 GRK4P32298 578 aa22.33■■□□□ 1.17
HDAC4-203ENST00000445704 NBPF11Q86T75 865 aa22.33■■□□□ 1.17
HDAC4-203ENST00000445704 NEDD1Q8NHV4 660 aa22.33■■□□□ 1.17
HDAC4-203ENST00000445704 CEP95Q96GE4 821 aa22.33■■□□□ 1.17
HDAC4-203ENST00000445704 IL25Q9H293 177 aa22.33■■□□□ 1.17
HDAC4-203ENST00000445704 PARP14Q460N5 1801 aa22.33■■□□□ 1.16
HDAC4-203ENST00000445704 RBBP6Q7Z6E9 1792 aaKnown RBP22.33■■□□□ 1.16
HDAC4-203ENST00000445704 ZMYM6O95789 1325 aa22.32■■□□□ 1.16
HDAC4-203ENST00000445704 HIP1O00291 1037 aa22.32■■□□□ 1.16
HDAC4-203ENST00000445704 TFAP4Q01664 338 aa22.32■■□□□ 1.16
HDAC4-203ENST00000445704 IRF5Q13568 498 aa22.32■■□□□ 1.16
HDAC4-203ENST00000445704 COG2Q14746 738 aa22.32■■□□□ 1.16
HDAC4-203ENST00000445704 MTMR4Q9NYA4 1195 aa22.32■■□□□ 1.16
HDAC4-203ENST00000445704 GJD2Q9UKL4 321 aa22.32■■□□□ 1.16
HDAC4-203ENST00000445704 ADCY3O60266 1144 aa22.31■■□□□ 1.16
HDAC4-203ENST00000445704 TSPY3P0CV98 308 aa22.31■■□□□ 1.16
HDAC4-203ENST00000445704 TSPY8P0CW00 308 aa22.31■■□□□ 1.16
HDAC4-203ENST00000445704 ELNP15502 786 aa22.31■■□□□ 1.16
HDAC4-203ENST00000445704 NBPF3Q9H094 633 aa22.31■■□□□ 1.16
HDAC4-203ENST00000445704 GOPCQ9HD26 462 aa22.31■■□□□ 1.16
HDAC4-203ENST00000445704 CLIP2Q9UDT6 1046 aa22.31■■□□□ 1.16
HDAC4-203ENST00000445704 MYH4Q9Y623 1939 aa22.31■■□□□ 1.16
HDAC4-203ENST00000445704 RAD21O60216 631 aa22.3■■□□□ 1.16
HDAC4-203ENST00000445704 FLOT1O75955 427 aa22.3■■□□□ 1.16
HDAC4-203ENST00000445704 FGRP09769 529 aa22.3■■□□□ 1.16
HDAC4-203ENST00000445704 MFAP1P55081 439 aaKnown RBP22.3■■□□□ 1.16
HDAC4-203ENST00000445704 HAND2P61296 217 aa22.3■■□□□ 1.16
HDAC4-203ENST00000445704 MTFR1Q15390 333 aa22.3■■□□□ 1.16
HDAC4-203ENST00000445704 SLAIN1Q8ND83 568 aa22.3■■□□□ 1.16
HDAC4-203ENST00000445704 ATG4CQ96DT6 458 aa22.3■■□□□ 1.16
HDAC4-203ENST00000445704 NUP88Q99567 741 aaPredicted RBP22.3■■□□□ 1.16
HDAC4-203ENST00000445704 FBXO28Q9NVF7 368 aa22.3■■□□□ 1.16
HDAC4-203ENST00000445704 ORC4O43929 436 aa22.29■■□□□ 1.16
HDAC4-203ENST00000445704 MAPK4P31152 587 aa22.29■■□□□ 1.16
HDAC4-203ENST00000445704 DSG3P32926 999 aa22.29■■□□□ 1.16
HDAC4-203ENST00000445704 MLLT1Q03111 559 aaPredicted RBP22.29■■□□□ 1.16
HDAC4-203ENST00000445704 FAM83BQ5T0W9 1011 aa22.29■■□□□ 1.16
HDAC4-203ENST00000445704 SKAP1Q86WV1 359 aa22.29■■□□□ 1.16
HDAC4-203ENST00000445704 LRRC47Q8N1G4 583 aaKnown RBP22.29■■□□□ 1.16
HDAC4-203ENST00000445704 HOXC10Q9NYD6 342 aa22.29■■□□□ 1.16
HDAC4-203ENST00000445704 F5H6K3 240 aa22.28■■□□□ 1.16
HDAC4-203ENST00000445704 TTLL1O95922 423 aa22.28■■□□□ 1.16
HDAC4-203ENST00000445704 NDUFB10O96000 172 aa22.28■■□□□ 1.16
HDAC4-203ENST00000445704 KLRC3Q07444 240 aa22.28■■□□□ 1.16
HDAC4-203ENST00000445704 SAMD1Q6SPF0 538 aaPredicted RBP22.28■■□□□ 1.16
HDAC4-203ENST00000445704 GPR142Q7Z601 462 aa22.28■■□□□ 1.16
HDAC4-203ENST00000445704 PXYLP1Q8TE99 480 aa22.28■■□□□ 1.16
HDAC4-203ENST00000445704 MKL1Q969V6 931 aa22.28■■□□□ 1.16
HDAC4-203ENST00000445704 IL17RBQ9NRM6 502 aa22.28■■□□□ 1.16
HDAC4-203ENST00000445704 CENPFP49454 3210 aa22.28■■□□□ 1.16
HDAC4-203ENST00000445704 LAMA4Q16363 1823 aa22.27■■□□□ 1.16
HDAC4-203ENST00000445704 TSPY2A6NKD2 308 aa22.27■■□□□ 1.16
HDAC4-203ENST00000445704 NMT2O60551 498 aa22.27■■□□□ 1.16
HDAC4-203ENST00000445704 CENPQQ7L2Z9 268 aaPredicted RBP22.27■■□□□ 1.16
HDAC4-203ENST00000445704 PLEKHH3Q7Z736 793 aa22.27■■□□□ 1.16
HDAC4-203ENST00000445704 TBC1D10CQ8IV04 446 aa22.27■■□□□ 1.16
HDAC4-203ENST00000445704 NKX2-3Q8TAU0 364 aa22.27■■□□□ 1.16
HDAC4-203ENST00000445704 RANBP6O60518 1105 aaKnown RBP22.26■■□□□ 1.15
HDAC4-203ENST00000445704 CCNA1P78396 465 aa22.26■■□□□ 1.15
HDAC4-203ENST00000445704 CCAR1Q8IX12 1150 aaKnown RBP22.26■■□□□ 1.15
HDAC4-203ENST00000445704 TMEM106CQ9BVX2 250 aa22.26■■□□□ 1.15
HDAC4-203ENST00000445704 MOV10L1Q9BXT6 1211 aaKnown RBP22.26■■□□□ 1.15
HDAC4-203ENST00000445704 BIN2Q9UBW5 565 aaPredicted RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms