RNA–Protein interactions for RNA: ENST00000445569.6

CALD1-211, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-211ENST00000445569 EVX2Q03828 476 aa12.02□□□□□ -0.49
CALD1-211ENST00000445569 SLC39A14Q15043 492 aa12.02□□□□□ -0.49
CALD1-211ENST00000445569 PFKFB3Q16875 520 aaPredicted RBP12.02□□□□□ -0.49
CALD1-211ENST00000445569 UVSSAQ2YD98 709 aa12.02□□□□□ -0.49
CALD1-211ENST00000445569 GALNT17Q6IS24 598 aa12.02□□□□□ -0.49
CALD1-211ENST00000445569 APOBEC3HQ6NTF7 200 aaKnown RBP12.02□□□□□ -0.49
CALD1-211ENST00000445569 RBM43Q6ZSC3 357 aaKnown RBP12.02□□□□□ -0.49
CALD1-211ENST00000445569 ARHGAP27Q6ZUM4 889 aa12.02□□□□□ -0.49
CALD1-211ENST00000445569 KIAA0825Q8IV33 1275 aa12.02□□□□□ -0.49
CALD1-211ENST00000445569 CCAR1Q8IX12 1150 aaKnown RBP12.02□□□□□ -0.49
CALD1-211ENST00000445569 ZNF713Q8N859 430 aaPredicted RBP12.02□□□□□ -0.49
CALD1-211ENST00000445569 FSIP1Q8NA03 581 aa12.02□□□□□ -0.49
CALD1-211ENST00000445569 SLC44A5Q8NCS7 719 aa12.02□□□□□ -0.49
CALD1-211ENST00000445569 CCDC12Q8WUD4 166 aaPredicted RBP12.02□□□□□ -0.49
CALD1-211ENST00000445569 PHF20Q9BVI0 1012 aa12.02□□□□□ -0.49
CALD1-211ENST00000445569 SPZ1Q9BXG8 430 aa12.02□□□□□ -0.49
CALD1-211ENST00000445569 TRIM34Q9BYJ4 488 aa12.02□□□□□ -0.49
CALD1-211ENST00000445569 IL17RBQ9NRM6 502 aa12.02□□□□□ -0.49
CALD1-211ENST00000445569 CLIC4Q9Y696 253 aa12.02□□□□□ -0.49
CALD1-211ENST00000445569 ATRNL1Q5VV63 1379 aa12.02□□□□□ -0.49
CALD1-211ENST00000445569 PARP1P09874 1014 aaKnown RBP12.01□□□□□ -0.49
CALD1-211ENST00000445569 SMARCA1P28370 1054 aa12.01□□□□□ -0.49
CALD1-211ENST00000445569 GUCY1A2P33402 732 aa12.01□□□□□ -0.49
CALD1-211ENST00000445569 TRAPPC10P48553 1259 aa12.01□□□□□ -0.49
CALD1-211ENST00000445569 C1QTNF8P60827 252 aa12.01□□□□□ -0.49
CALD1-211ENST00000445569 PKN1Q16512 942 aa12.01□□□□□ -0.49
CALD1-211ENST00000445569 NIM1KQ8IY84 436 aa12.01□□□□□ -0.49
CALD1-211ENST00000445569 LARGE2Q8N3Y3 721 aa12.01□□□□□ -0.49
CALD1-211ENST00000445569 TMEM47Q9BQJ4 181 aa12.01□□□□□ -0.49
CALD1-211ENST00000445569 FTOQ9C0B1 505 aaKnown RBP eCLIP12.01□□□□□ -0.492e-10■■□□□ 12.9
CALD1-211ENST00000445569 DDX4Q9NQI0 724 aaKnown RBP12.01□□□□□ -0.49
CALD1-211ENST00000445569 GJB4Q9NTQ9 266 aa12.01□□□□□ -0.49
CALD1-211ENST00000445569 ARFGEF1Q9Y6D6 1849 aa12.01□□□□□ -0.49
CALD1-211ENST00000445569 MYH4Q9Y623 1939 aa12.01□□□□□ -0.49
CALD1-211ENST00000445569 CUTAO60888 179 aa12□□□□□ -0.49
CALD1-211ENST00000445569 CMA1P23946 247 aa12□□□□□ -0.49
CALD1-211ENST00000445569 TPRNQ4KMQ1 711 aa12□□□□□ -0.49
CALD1-211ENST00000445569 ASPRV1Q53RT3 343 aa12□□□□□ -0.49
CALD1-211ENST00000445569 RSBN1LQ6PCB5 846 aaPredicted RBP12□□□□□ -0.49
CALD1-211ENST00000445569 CCDC82Q8N4S0 544 aa12□□□□□ -0.49
CALD1-211ENST00000445569 SRBD1Q8N5C6 995 aaKnown RBP12□□□□□ -0.49
CALD1-211ENST00000445569 MXD3Q9BW11 206 aa12□□□□□ -0.49
CALD1-211ENST00000445569 RBSNQ9H1K0 784 aa12□□□□□ -0.49
CALD1-211ENST00000445569 EIF4ENIF1Q9NRA8 985 aaKnown RBP12□□□□□ -0.49
CALD1-211ENST00000445569 PCDHA7Q9UN72 937 aa12□□□□□ -0.49
CALD1-211ENST00000445569 KCNJ14Q9UNX9 436 aa12□□□□□ -0.49
CALD1-211ENST00000445569 V9GY48 417 aaPredicted RBP12□□□□□ -0.49
CALD1-211ENST00000445569 IGKV6D-41A0A0C4DH26 115 aa11.99□□□□□ -0.49
CALD1-211ENST00000445569 TRIM75PA6NK02 468 aa11.99□□□□□ -0.49
CALD1-211ENST00000445569 BTBD18B2RXH4 712 aa11.99□□□□□ -0.49
CALD1-211ENST00000445569 NR1I2O75469 434 aa11.99□□□□□ -0.49
CALD1-211ENST00000445569 TTLL1O95922 423 aa11.99□□□□□ -0.49
CALD1-211ENST00000445569 SASS6Q6UVJ0 657 aa11.99□□□□□ -0.49
CALD1-211ENST00000445569 OGFOD1Q8N543 542 aa11.99□□□□□ -0.49
CALD1-211ENST00000445569 KRI1Q8N9T8 703 aaKnown RBP11.99□□□□□ -0.49
CALD1-211ENST00000445569 CEP95Q96GE4 821 aa11.99□□□□□ -0.49
CALD1-211ENST00000445569 FUCA2Q9BTY2 467 aa11.99□□□□□ -0.49
CALD1-211ENST00000445569 PANK2Q9BZ23 570 aa11.99□□□□□ -0.49
CALD1-211ENST00000445569 GPBP1L1Q9HC44 474 aaPredicted RBP11.99□□□□□ -0.49
CALD1-211ENST00000445569 MTMR4Q9NYA4 1195 aa11.99□□□□□ -0.49
CALD1-211ENST00000445569 VPS54Q9P1Q0 977 aa11.99□□□□□ -0.49
CALD1-211ENST00000445569 PI4KBQ9UBF8 816 aa11.99□□□□□ -0.49
CALD1-211ENST00000445569 SEC63Q9UGP8 760 aaKnown RBP11.99□□□□□ -0.49
CALD1-211ENST00000445569 MAD2L2Q9UI95 211 aa11.99□□□□□ -0.49
CALD1-211ENST00000445569 PALM3A6NDB9 673 aaPredicted RBP11.98□□□□□ -0.49
CALD1-211ENST00000445569 YDJCA8MPS7 323 aa11.98□□□□□ -0.49
CALD1-211ENST00000445569 SHMT1P34896 483 aa11.98□□□□□ -0.49
CALD1-211ENST00000445569 NLRP5P59047 1200 aa11.98□□□□□ -0.49
CALD1-211ENST00000445569 PTPAQ15257 358 aa11.98□□□□□ -0.49
CALD1-211ENST00000445569 CFAP100Q494V2 611 aa11.98□□□□□ -0.49
CALD1-211ENST00000445569 ZSCAN29Q8IWY8 852 aaPredicted RBP11.98□□□□□ -0.49
CALD1-211ENST00000445569 CMTR1Q8N1G2 835 aaKnown RBP11.98□□□□□ -0.49
CALD1-211ENST00000445569 DAGLBQ8NCG7 672 aa11.98□□□□□ -0.49
CALD1-211ENST00000445569 AGBL3Q8NEM8 1001 aa11.98□□□□□ -0.49
CALD1-211ENST00000445569 FAM200AQ8TCP9 573 aa11.98□□□□□ -0.49
CALD1-211ENST00000445569 TRIM44Q96DX7 344 aaPredicted RBP11.98□□□□□ -0.49
CALD1-211ENST00000445569 RRP36Q96EU6 259 aaKnown RBP11.98□□□□□ -0.49
CALD1-211ENST00000445569 CCDC34Q96HJ3 373 aa11.98□□□□□ -0.49
CALD1-211ENST00000445569 TIGD1Q96MW7 591 aa11.98□□□□□ -0.49
CALD1-211ENST00000445569 PPP1R9BQ96SB3 815 aa11.98□□□□□ -0.49
CALD1-211ENST00000445569 TAOK3Q9H2K8 898 aa11.98□□□□□ -0.49
CALD1-211ENST00000445569 HOOK1Q9UJC3 728 aaKnown RBP11.98□□□□□ -0.49
CALD1-211ENST00000445569 ZNRF3Q9ULT6 936 aa11.98□□□□□ -0.49
CALD1-211ENST00000445569 LTBP3Q9NS15 1303 aa11.97□□□□□ -0.49
CALD1-211ENST00000445569 FAM237AA0A1B0GTK4 181 aa11.97□□□□□ -0.49
CALD1-211ENST00000445569 KLRF2D3W0D1 207 aa11.97□□□□□ -0.49
CALD1-211ENST00000445569 UBE2Q2LH0YL09 131 aa11.97□□□□□ -0.49
CALD1-211ENST00000445569 VIL1P09327 827 aaKnown RBP11.97□□□□□ -0.49
CALD1-211ENST00000445569 TYRO3Q06418 890 aa11.97□□□□□ -0.49
CALD1-211ENST00000445569 DLGAP5Q15398 846 aa11.97□□□□□ -0.49
CALD1-211ENST00000445569 ZRSR1Q15695 479 aaKnown RBP11.97□□□□□ -0.49
CALD1-211ENST00000445569 STX1AQ16623 288 aa11.97□□□□□ -0.49
CALD1-211ENST00000445569 GPATCH4Q5T3I0 446 aaKnown RBP11.97□□□□□ -0.49
CALD1-211ENST00000445569 PPP1R18Q6NYC8 613 aa11.97□□□□□ -0.49
CALD1-211ENST00000445569 FOXP4Q8IVH2 680 aaPredicted RBP11.97□□□□□ -0.49
CALD1-211ENST00000445569 FMR1NBQ8N0W7 255 aaPredicted RBP11.97□□□□□ -0.49
CALD1-211ENST00000445569 ZNF579Q8NAF0 562 aaKnown RBP11.97□□□□□ -0.49
CALD1-211ENST00000445569 ENGASEQ8NFI3 743 aa11.97□□□□□ -0.49
CALD1-211ENST00000445569 ZNF526Q8TF50 670 aaPredicted RBP11.97□□□□□ -0.49
CALD1-211ENST00000445569 GOLPH3LQ9H4A5 285 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms