RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 MAD2L2Q9UI95 211 aa18.01■□□□□ 0.47
SNX13-204ENST00000444712 TOB1P50616 345 aaPredicted RBP18■□□□□ 0.47
SNX13-204ENST00000444712 SCNN1DP51172 638 aa18■□□□□ 0.47
SNX13-204ENST00000444712 NLRP5P59047 1200 aa18■□□□□ 0.47
SNX13-204ENST00000444712 DACT2Q5SW24 774 aa18■□□□□ 0.47
SNX13-204ENST00000444712 GALNT17Q6IS24 598 aa18■□□□□ 0.47
SNX13-204ENST00000444712 CDC42EP5Q6NZY7 148 aa18■□□□□ 0.47
SNX13-204ENST00000444712 ZNF579Q8NAF0 562 aaKnown RBP18■□□□□ 0.47
SNX13-204ENST00000444712 CABP5Q9NP86 173 aa18■□□□□ 0.47
SNX13-204ENST00000444712 SERPINB13Q9UIV8 391 aa18■□□□□ 0.47
SNX13-204ENST00000444712 HPSEQ9Y251 543 aa18■□□□□ 0.47
SNX13-204ENST00000444712 PALM3A6NDB9 673 aaPredicted RBP17.99■□□□□ 0.47
SNX13-204ENST00000444712 TRIM75PA6NK02 468 aa17.99■□□□□ 0.47
SNX13-204ENST00000444712 ESPNB1AK53 854 aa17.99■□□□□ 0.47
SNX13-204ENST00000444712 NPM3O75607 178 aaKnown RBP17.99■□□□□ 0.47
SNX13-204ENST00000444712 TRAPPC10P48553 1259 aa17.99■□□□□ 0.47
SNX13-204ENST00000444712 APOBEC3HQ6NTF7 200 aaKnown RBP17.99■□□□□ 0.47
SNX13-204ENST00000444712 NAT10Q9H0A0 1025 aaKnown RBP17.99■□□□□ 0.47
SNX13-204ENST00000444712 EHD4Q9H223 541 aa17.99■□□□□ 0.47
SNX13-204ENST00000444712 DHX36Q9H2U1 1008 aaKnown RBP17.99■□□□□ 0.47
SNX13-204ENST00000444712 FAM13BQ9NYF5 915 aa17.99■□□□□ 0.47
SNX13-204ENST00000444712 USP25Q9UHP3 1055 aa17.99■□□□□ 0.47
SNX13-204ENST00000444712 GREB1LQ9C091 1923 aaPredicted RBP17.99■□□□□ 0.47
SNX13-204ENST00000444712 PARP1P09874 1014 aaKnown RBP17.99■□□□□ 0.47
SNX13-204ENST00000444712 PTPREP23469 700 aa17.99■□□□□ 0.47
SNX13-204ENST00000444712 ZNF165P49910 485 aa17.99■□□□□ 0.47
SNX13-204ENST00000444712 OXER1Q8TDS5 423 aa17.99■□□□□ 0.47
SNX13-204ENST00000444712 SPZ1Q9BXG8 430 aa17.99■□□□□ 0.47
SNX13-204ENST00000444712 SERPINA10Q9UK55 444 aa17.99■□□□□ 0.47
SNX13-204ENST00000444712 ELOA2Q8IYF1 753 aaPredicted RBP17.98■□□□□ 0.47
SNX13-204ENST00000444712 RTKN2Q8IZC4 609 aa17.98■□□□□ 0.47
SNX13-204ENST00000444712 MXD3Q9BW11 206 aa17.98■□□□□ 0.47
SNX13-204ENST00000444712 CBX8Q9HC52 389 aa17.98■□□□□ 0.47
SNX13-204ENST00000444712 HOOK1Q9UJC3 728 aaKnown RBP17.98■□□□□ 0.47
SNX13-204ENST00000444712 hCG_1642624A0A1W2PR95 340 aa17.98■□□□□ 0.47
SNX13-204ENST00000444712 CCDC93Q567U6 631 aa17.98■□□□□ 0.47
SNX13-204ENST00000444712 SHC4Q6S5L8 630 aa17.98■□□□□ 0.47
SNX13-204ENST00000444712 TTLL6Q8N841 843 aa17.98■□□□□ 0.47
SNX13-204ENST00000444712 CCDC12Q8WUD4 166 aaPredicted RBP17.98■□□□□ 0.47
SNX13-204ENST00000444712 TNFRSF25Q93038 417 aa17.98■□□□□ 0.47
SNX13-204ENST00000444712 CEP95Q96GE4 821 aa17.98■□□□□ 0.47
SNX13-204ENST00000444712 DDX4Q9NQI0 724 aaKnown RBP17.98■□□□□ 0.47
SNX13-204ENST00000444712 KIAA1468Q9P260 1216 aa17.98■□□□□ 0.47
SNX13-204ENST00000444712 SRPRBQ9Y5M8 271 aaKnown RBP17.98■□□□□ 0.47
SNX13-204ENST00000444712 MYH4Q9Y623 1939 aa17.97■□□□□ 0.47
SNX13-204ENST00000444712 ADCY5O95622 1261 aa17.97■□□□□ 0.47
SNX13-204ENST00000444712 AOC3Q16853 763 aa17.97■□□□□ 0.47
SNX13-204ENST00000444712 ZSCAN30Q86W11 494 aa17.97■□□□□ 0.47
SNX13-204ENST00000444712 CEP57L1Q8IYX8 460 aa17.97■□□□□ 0.47
SNX13-204ENST00000444712 STAG2Q8N3U4 1231 aa17.97■□□□□ 0.47
SNX13-204ENST00000444712 SHISA4Q96DD7 197 aa17.97■□□□□ 0.47
SNX13-204ENST00000444712 CCDC17Q96LX7 622 aa17.97■□□□□ 0.47
SNX13-204ENST00000444712 IDI2Q9BXS1 227 aa17.97■□□□□ 0.47
SNX13-204ENST00000444712 DNAJC25Q9H1X3 360 aa17.97■□□□□ 0.47
SNX13-204ENST00000444712 ZNF219Q9P2Y4 722 aaPredicted RBP17.97■□□□□ 0.47
SNX13-204ENST00000444712 FBXO2Q9UK22 296 aaPredicted RBP17.97■□□□□ 0.47
SNX13-204ENST00000444712 PCDHB6Q9Y5E3 794 aa17.97■□□□□ 0.47
SNX13-204ENST00000444712 PTMAP06454 111 aaKnown RBP17.96■□□□□ 0.47
SNX13-204ENST00000444712 KIAA0825Q8IV33 1275 aa17.96■□□□□ 0.47
SNX13-204ENST00000444712 FERMT2Q96AC1 680 aa17.96■□□□□ 0.47
SNX13-204ENST00000444712 VPS33BQ9H267 617 aa17.96■□□□□ 0.47
SNX13-204ENST00000444712 BAZ2BQ9UIF8 2168 aaKnown RBP17.96■□□□□ 0.47
SNX13-204ENST00000444712 KLRF2D3W0D1 207 aa17.96■□□□□ 0.47
SNX13-204ENST00000444712 GOLGA6L19H0YKK7 550 aa17.96■□□□□ 0.47
SNX13-204ENST00000444712 PPIP5K2O43314 1243 aa17.96■□□□□ 0.47
SNX13-204ENST00000444712 NPY5RQ15761 445 aa17.96■□□□□ 0.47
SNX13-204ENST00000444712 BLIDQ8IZY5 108 aa17.96■□□□□ 0.47
SNX13-204ENST00000444712 DAGLBQ8NCG7 672 aa17.96■□□□□ 0.47
SNX13-204ENST00000444712 CCDC34Q96HJ3 373 aa17.96■□□□□ 0.47
SNX13-204ENST00000444712 PSMD1Q99460 953 aa17.96■□□□□ 0.47
SNX13-204ENST00000444712 MTMR4Q9NYA4 1195 aa17.96■□□□□ 0.47
SNX13-204ENST00000444712 KCNH3Q9ULD8 1083 aa17.96■□□□□ 0.47
SNX13-204ENST00000444712 PCDHA4Q9UN74 947 aa17.96■□□□□ 0.47
SNX13-204ENST00000444712 SIPA1L1O43166 1804 aa17.95■□□□□ 0.46
SNX13-204ENST00000444712 IGKV6D-41A0A0C4DH26 115 aa17.95■□□□□ 0.46
SNX13-204ENST00000444712 hCG_1984214I3L0E3 225 aa17.95■□□□□ 0.46
SNX13-204ENST00000444712 MSNP26038 577 aaKnown RBP17.95■□□□□ 0.46
SNX13-204ENST00000444712 RBM5P52756 815 aaKnown RBP eCLIP17.95■□□□□ 0.46
SNX13-204ENST00000444712 ASPRV1Q53RT3 343 aa17.95■□□□□ 0.46
SNX13-204ENST00000444712 SOGA3Q5TF21 947 aa17.95■□□□□ 0.46
SNX13-204ENST00000444712 ZNF713Q8N859 430 aaPredicted RBP17.95■□□□□ 0.46
SNX13-204ENST00000444712 COL2A1P02458 1487 aaPredicted RBP17.95■□□□□ 0.46
SNX13-204ENST00000444712 TTLL1O95922 423 aa17.94■□□□□ 0.46
SNX13-204ENST00000444712 TTC38Q5R3I4 469 aa17.94■□□□□ 0.46
SNX13-204ENST00000444712 LUZP1Q86V48 1076 aa17.94■□□□□ 0.46
SNX13-204ENST00000444712 CLIC6Q96NY7 704 aa17.94■□□□□ 0.46
SNX13-204ENST00000444712 BARHL2Q9NY43 387 aa17.94■□□□□ 0.46
SNX13-204ENST00000444712 C21orf2O43822 256 aa17.94■□□□□ 0.46
SNX13-204ENST00000444712 RRP36Q96EU6 259 aaKnown RBP17.94■□□□□ 0.46
SNX13-204ENST00000444712 KCNQ5Q9NR82 932 aa17.94■□□□□ 0.46
SNX13-204ENST00000444712 SEC63Q9UGP8 760 aaKnown RBP17.94■□□□□ 0.46
SNX13-204ENST00000444712 GOLGA6L6A8MZA4 724 aa17.93■□□□□ 0.46
SNX13-204ENST00000444712 PLCB2Q00722 1185 aa17.93■□□□□ 0.46
SNX13-204ENST00000444712 KANK3Q6NY19 840 aa17.93■□□□□ 0.46
SNX13-204ENST00000444712 BPIFA3Q9BQP9 254 aa17.93■□□□□ 0.46
SNX13-204ENST00000444712 PI4KBQ9UBF8 816 aa17.93■□□□□ 0.46
SNX13-204ENST00000444712 BECN2A8MW95 431 aa17.93■□□□□ 0.46
SNX13-204ENST00000444712 TPM3P06753 285 aa17.93■□□□□ 0.46
SNX13-204ENST00000444712 AKR1B1P15121 316 aa17.93■□□□□ 0.46
SNX13-204ENST00000444712 ATP2B1P20020 1258 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms