RNA–Protein interactions for RNA: ENST00000444092.5

HDLBP-221, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-221ENST00000444092 SWAP70Q9UH65 585 aa12.15□□□□□ -0.46
HDLBP-221ENST00000444092 DDX20Q9UHI6 824 aaKnown RBP12.15□□□□□ -0.46
HDLBP-221ENST00000444092 COL11A1P12107 1806 aaPredicted RBP12.15□□□□□ -0.46
HDLBP-221ENST00000444092 PARP14Q460N5 1801 aa12.14□□□□□ -0.47
HDLBP-221ENST00000444092 ZNF236Q9UL36 1845 aa12.14□□□□□ -0.47
HDLBP-221ENST00000444092 A0A1W2PRG0 241 aa12.14□□□□□ -0.47
HDLBP-221ENST00000444092 STRNO43815 780 aa12.14□□□□□ -0.47
HDLBP-221ENST00000444092 HOXC6P09630 235 aa12.14□□□□□ -0.47
HDLBP-221ENST00000444092 CYP2C19P33261 490 aa12.14□□□□□ -0.47
HDLBP-221ENST00000444092 MDM2Q00987 491 aaPredicted RBP12.14□□□□□ -0.47
HDLBP-221ENST00000444092 EVX2Q03828 476 aa12.14□□□□□ -0.47
HDLBP-221ENST00000444092 PLS1Q14651 629 aa12.14□□□□□ -0.47
HDLBP-221ENST00000444092 LRIT3Q3SXY7 679 aa12.14□□□□□ -0.47
HDLBP-221ENST00000444092 GPR153Q6NV75 609 aa12.14□□□□□ -0.47
HDLBP-221ENST00000444092 SAMD1Q6SPF0 538 aaPredicted RBP12.14□□□□□ -0.47
HDLBP-221ENST00000444092 TMEM179Q6ZVK1 233 aa12.14□□□□□ -0.47
HDLBP-221ENST00000444092 AMOTL1Q8IY63 956 aa12.14□□□□□ -0.47
HDLBP-221ENST00000444092 MIER1Q8N108 512 aa12.14□□□□□ -0.47
HDLBP-221ENST00000444092 DEFB123Q8N688 67 aa12.14□□□□□ -0.47
HDLBP-221ENST00000444092 LPAR1Q92633 364 aa12.14□□□□□ -0.47
HDLBP-221ENST00000444092 MOV10L1Q9BXT6 1211 aaKnown RBP12.14□□□□□ -0.47
HDLBP-221ENST00000444092 SH2D4AQ9H788 454 aa12.14□□□□□ -0.47
HDLBP-221ENST00000444092 ARMT1Q9H993 441 aa12.14□□□□□ -0.47
HDLBP-221ENST00000444092 ARHGEF10LQ9HCE6 1279 aa12.14□□□□□ -0.47
HDLBP-221ENST00000444092 DDX19BQ9UMR2 479 aa12.14□□□□□ -0.47
HDLBP-221ENST00000444092 SMCHD1A6NHR9 2005 aa12.14□□□□□ -0.47
HDLBP-221ENST00000444092 PLXNA1Q9UIW2 1896 aa12.14□□□□□ -0.47
HDLBP-221ENST00000444092 A0A0G2JMZ2 1700 aa12.14□□□□□ -0.47
HDLBP-221ENST00000444092 ZBED9Q6R2W3 1325 aa12.13□□□□□ -0.47
HDLBP-221ENST00000444092 TCRBV5S4A2TA0A5A2 114 aa12.13□□□□□ -0.47
HDLBP-221ENST00000444092 RAB11FIP3O75154 756 aa12.13□□□□□ -0.47
HDLBP-221ENST00000444092 CYP2D6P10635 497 aa12.13□□□□□ -0.47
HDLBP-221ENST00000444092 ADORA2AP29274 412 aa12.13□□□□□ -0.47
HDLBP-221ENST00000444092 ATN1P54259 1190 aaPredicted RBP12.13□□□□□ -0.47
HDLBP-221ENST00000444092 SLC44A5Q8NCS7 719 aa12.13□□□□□ -0.47
HDLBP-221ENST00000444092 DYNLL2Q96FJ2 89 aa12.13□□□□□ -0.47
HDLBP-221ENST00000444092 DDRGK1Q96HY6 314 aa12.13□□□□□ -0.47
HDLBP-221ENST00000444092 LBHD1Q9BQE6 289 aaPredicted RBP12.13□□□□□ -0.47
HDLBP-221ENST00000444092 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.13□□□□□ -0.474e-7■□□□□ 9.9
HDLBP-221ENST00000444092 SPATC1LQ9H0A9 340 aa12.13□□□□□ -0.47
HDLBP-221ENST00000444092 BOLA2Q9H3K6 86 aa12.13□□□□□ -0.47
HDLBP-221ENST00000444092 ATP8A2Q9NTI2 1148 aa12.13□□□□□ -0.47
HDLBP-221ENST00000444092 PAG1Q9NWQ8 432 aa12.13□□□□□ -0.47
HDLBP-221ENST00000444092 SLC5A4Q9NY91 659 aa12.13□□□□□ -0.47
HDLBP-221ENST00000444092 PRKAG2Q9UGJ0 569 aa12.13□□□□□ -0.47
HDLBP-221ENST00000444092 COL6A3P12111 3177 aa12.12□□□□□ -0.47
HDLBP-221ENST00000444092 DNM1LO00429 736 aa12.12□□□□□ -0.47
HDLBP-221ENST00000444092 FLOT1O75955 427 aa12.12□□□□□ -0.47
HDLBP-221ENST00000444092 MBD4O95243 580 aa12.12□□□□□ -0.47
HDLBP-221ENST00000444092 MYCNP04198 464 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-221ENST00000444092 ERCC3P19447 782 aa12.12□□□□□ -0.47
HDLBP-221ENST00000444092 DSG3P32926 999 aa12.12□□□□□ -0.47
HDLBP-221ENST00000444092 ICA1Q05084 483 aa12.12□□□□□ -0.47
HDLBP-221ENST00000444092 Q7L0L9 218 aa12.12□□□□□ -0.47
HDLBP-221ENST00000444092 NCAPG2Q86XI2 1143 aa12.12□□□□□ -0.47
HDLBP-221ENST00000444092 MB21D1Q8N884 522 aa12.12□□□□□ -0.47
HDLBP-221ENST00000444092 ARRDC4Q8NCT1 418 aa12.12□□□□□ -0.47
HDLBP-221ENST00000444092 SHCBP1Q8NEM2 672 aa12.12□□□□□ -0.47
HDLBP-221ENST00000444092 CHMP4BQ9H444 224 aaKnown RBP12.12□□□□□ -0.47
HDLBP-221ENST00000444092 MROH8Q9H579 483 aa12.12□□□□□ -0.47
HDLBP-221ENST00000444092 COG6Q9Y2V7 657 aa12.12□□□□□ -0.47
HDLBP-221ENST00000444092 DNAH12Q6ZR08 3092 aa12.12□□□□□ -0.47
HDLBP-221ENST00000444092 KBTBD13C9JR72 458 aa12.11□□□□□ -0.47
HDLBP-221ENST00000444092 DLL1O00548 723 aa12.11□□□□□ -0.47
HDLBP-221ENST00000444092 PRKAB2O43741 272 aa12.11□□□□□ -0.47
HDLBP-221ENST00000444092 CYBAP13498 195 aa12.11□□□□□ -0.47
HDLBP-221ENST00000444092 AKR1B1P15121 316 aa12.11□□□□□ -0.47
HDLBP-221ENST00000444092 ADD2P35612 726 aa12.11□□□□□ -0.47
HDLBP-221ENST00000444092 GJC2Q5T442 439 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-221ENST00000444092 ANO1Q5XXA6 986 aa12.11□□□□□ -0.47
HDLBP-221ENST00000444092 OLFML2BQ68BL8 750 aa12.11□□□□□ -0.47
HDLBP-221ENST00000444092 DIEXFQ68CQ4 756 aaKnown RBP12.11□□□□□ -0.47
HDLBP-221ENST00000444092 CLEC10AQ8IUN9 316 aa12.11□□□□□ -0.47
HDLBP-221ENST00000444092 SPICE1Q8N0Z3 855 aa12.11□□□□□ -0.47
HDLBP-221ENST00000444092 TRPV1Q8NER1 839 aa12.11□□□□□ -0.47
HDLBP-221ENST00000444092 ATG4CQ96DT6 458 aa12.11□□□□□ -0.47
HDLBP-221ENST00000444092 CCDC17Q96LX7 622 aa12.11□□□□□ -0.47
HDLBP-221ENST00000444092 VCPKMTQ9H867 229 aa12.11□□□□□ -0.47
HDLBP-221ENST00000444092 TMX2Q9Y320 296 aa12.11□□□□□ -0.47
HDLBP-221ENST00000444092 USP17L12C9JPN9 530 aa12.1□□□□□ -0.47
HDLBP-221ENST00000444092 USP17L21D6R901 530 aa12.1□□□□□ -0.47
HDLBP-221ENST00000444092 WDR46O15213 610 aaKnown RBP12.1□□□□□ -0.47
HDLBP-221ENST00000444092 RAD21O60216 631 aa12.1□□□□□ -0.47
HDLBP-221ENST00000444092 ATP5JP18859 108 aa12.1□□□□□ -0.47
HDLBP-221ENST00000444092 CDK8P49336 464 aa12.1□□□□□ -0.47
HDLBP-221ENST00000444092 RTP1P59025 263 aa12.1□□□□□ -0.47
HDLBP-221ENST00000444092 SLFNL1Q499Z3 407 aa12.1□□□□□ -0.47
HDLBP-221ENST00000444092 KIAA1755Q5JYT7 1200 aa12.1□□□□□ -0.47
HDLBP-221ENST00000444092 C12orf60Q5U649 245 aa12.1□□□□□ -0.47
HDLBP-221ENST00000444092 SIRT2Q8IXJ6 389 aa12.1□□□□□ -0.47
HDLBP-221ENST00000444092 ZBTB40Q9NUA8 1239 aa12.1□□□□□ -0.47
HDLBP-221ENST00000444092 ATP11BQ9Y2G3 1177 aa12.1□□□□□ -0.47
HDLBP-221ENST00000444092 MYH4Q9Y623 1939 aa12.09□□□□□ -0.47
HDLBP-221ENST00000444092 LTBP2Q14767 1821 aa12.09□□□□□ -0.47
HDLBP-221ENST00000444092 CYP2D7A0A087X1C5 515 aa12.09□□□□□ -0.47
HDLBP-221ENST00000444092 SEPT4O43236 478 aa12.09□□□□□ -0.47
HDLBP-221ENST00000444092 COBLO75128 1261 aa12.09□□□□□ -0.47
HDLBP-221ENST00000444092 SLC25A27O95847 323 aa12.09□□□□□ -0.47
HDLBP-221ENST00000444092 FCER1AP12319 257 aa12.09□□□□□ -0.47
HDLBP-221ENST00000444092 PRAMEF19Q5SWL8 479 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms